BLASTX nr result

ID: Panax21_contig00021295 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00021295
         (895 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277673.1| PREDICTED: homeobox-leucine zipper protein R...   255   1e-65
ref|XP_002303433.1| predicted protein [Populus trichocarpa] gi|2...   240   4e-61
ref|XP_002326544.1| predicted protein [Populus trichocarpa] gi|2...   238   1e-60
ref|XP_004172445.1| PREDICTED: homeobox-leucine zipper protein R...   238   1e-60
ref|XP_004136201.1| PREDICTED: homeobox-leucine zipper protein R...   238   1e-60

>ref|XP_002277673.1| PREDICTED: homeobox-leucine zipper protein ROC3 [Vitis vinifera]
            gi|147777871|emb|CAN60291.1| hypothetical protein
            VITISV_032685 [Vitis vinifera]
            gi|297742043|emb|CBI33830.3| unnamed protein product
            [Vitis vinifera]
          Length = 798

 Score =  255 bits (651), Expect = 1e-65
 Identities = 131/163 (80%), Positives = 143/163 (87%), Gaps = 8/163 (4%)
 Frame = -3

Query: 893  LDVLSNGNSLHEVAHIANGSHPGNCISLLRINVASNSSQNVELMLQESCTDESGSLVAYT 714
            LDVLSNGNSLHEVAHIANGSHPGNCISLLRINVASNSSQNVELMLQESCTD+SGS V YT
Sbjct: 613  LDVLSNGNSLHEVAHIANGSHPGNCISLLRINVASNSSQNVELMLQESCTDQSGSHVVYT 672

Query: 713  TVDVDAIQLAMNGEDPSCIPLLPLGFVILPMAPSNN-NVGGTQSSN-------GNILNSG 558
            T+DVDAIQLAM+GEDPSCIPLLP+GF I+P+ P+N+ N+  T   N       GN  NSG
Sbjct: 673  TIDVDAIQLAMSGEDPSCIPLLPMGFAIVPVVPNNDCNIMTTTDDNPMPPSGDGNGHNSG 732

Query: 557  CLLTIGLQVLASTIPAAKLSLSSVTAINNHICNTVHQINAALS 429
            CLLT+GLQVLASTIP AKL+LSSVTAINNH+CNTVHQINAALS
Sbjct: 733  CLLTVGLQVLASTIPTAKLNLSSVTAINNHLCNTVHQINAALS 775


>ref|XP_002303433.1| predicted protein [Populus trichocarpa] gi|222840865|gb|EEE78412.1|
            predicted protein [Populus trichocarpa]
          Length = 774

 Score =  240 bits (612), Expect = 4e-61
 Identities = 125/160 (78%), Positives = 142/160 (88%), Gaps = 5/160 (3%)
 Frame = -3

Query: 893  LDVLSNGNSLHEVAHIANGSHPGNCISLLRINVASNSSQNVELMLQESCTDESGSLVAYT 714
            L++LSNGN+LHEVAHIANGSHPGNCISLLRINVASNSSQ+VELMLQE CTD+SGSLV YT
Sbjct: 614  LELLSNGNALHEVAHIANGSHPGNCISLLRINVASNSSQHVELMLQECCTDQSGSLVVYT 673

Query: 713  TVDVDAIQLAMNGEDPSCIPLLPLGFVILPM----APSNNNVGGTQSSNGN-ILNSGCLL 549
            TVDV++IQLAM+GEDPSCIPLLPLGFVI+P+    A S  N   + S +GN   NSGCLL
Sbjct: 674  TVDVESIQLAMSGEDPSCIPLLPLGFVIVPVESSSAVSEGNSMPSNSEDGNGHNNSGCLL 733

Query: 548  TIGLQVLASTIPAAKLSLSSVTAINNHICNTVHQINAALS 429
            T+GLQVLASTIP+AKL+LSSVTAINNH+CNTV+QI AALS
Sbjct: 734  TVGLQVLASTIPSAKLNLSSVTAINNHLCNTVNQITAALS 773


>ref|XP_002326544.1| predicted protein [Populus trichocarpa] gi|222833866|gb|EEE72343.1|
            predicted protein [Populus trichocarpa]
          Length = 726

 Score =  238 bits (608), Expect = 1e-60
 Identities = 126/189 (66%), Positives = 147/189 (77%), Gaps = 8/189 (4%)
 Frame = -3

Query: 893  LDVLSNGNSLHEVAHIANGSHPGNCISLLRINVASNSSQNVELMLQESCTDESGSLVAYT 714
            L+VLSNGN+LHEVAHIANGSHPGNCISLLRINVASNSSQ+V+LMLQESCTD+SGSLV +T
Sbjct: 534  LEVLSNGNALHEVAHIANGSHPGNCISLLRINVASNSSQHVDLMLQESCTDQSGSLVVFT 593

Query: 713  TVDVDAIQLAMNGEDPSCIPLLPLGFVILPMAPSNNNV-------GGTQSSNGN-ILNSG 558
            TVDV++IQLAM+GEDPSCIPLLPLGFVI+P+  S++ V         ++  NGN   NSG
Sbjct: 594  TVDVESIQLAMSGEDPSCIPLLPLGFVIVPVESSSSTVSEGNSMQSNSEDGNGNGHNNSG 653

Query: 557  CLLTIGLQVLASTIPAAKLSLSSVTAINNHICNTVHQINAALSIGGSXXXXXXXXXXXXX 378
            CLLT+GLQ LASTIP+AKL+ SSVTAINNH+CNTV+QI  ALS   +             
Sbjct: 654  CLLTVGLQALASTIPSAKLNFSSVTAINNHLCNTVNQITVALSNNTTTTSSCLDNSNAVG 713

Query: 377  XSVEPPAAP 351
               EP AAP
Sbjct: 714  SCNEPTAAP 722


>ref|XP_004172445.1| PREDICTED: homeobox-leucine zipper protein ROC3-like [Cucumis
            sativus]
          Length = 812

 Score =  238 bits (607), Expect = 1e-60
 Identities = 126/184 (68%), Positives = 141/184 (76%), Gaps = 2/184 (1%)
 Frame = -3

Query: 893  LDVLSNGNSLHEVAHIANGSHPGNCISLLRINVASNSSQNVELMLQESCTDESGSLVAYT 714
            L+VLSNGNSLHEVAHIANGSHPGNCISLLRINVASNSSQ+VELMLQESCTD+SGSLV Y 
Sbjct: 627  LEVLSNGNSLHEVAHIANGSHPGNCISLLRINVASNSSQHVELMLQESCTDQSGSLVVYA 686

Query: 713  TVDVDAIQLAMNGEDPSCIPLLPLGFVILPMAPS--NNNVGGTQSSNGNILNSGCLLTIG 540
            T+DVD+IQLAM+GEDPSCIPLLP+GF I+P+  S  + +            NSGCLLT+G
Sbjct: 687  TIDVDSIQLAMSGEDPSCIPLLPIGFSIVPIIGSTIDGHPAPPPEDGTPNPNSGCLLTVG 746

Query: 539  LQVLASTIPAAKLSLSSVTAINNHICNTVHQINAALSIGGSXXXXXXXXXXXXXXSVEPP 360
            LQVLASTIP+AKL+LSSVTAINNH+CNTVHQIN AL  GG                  PP
Sbjct: 747  LQVLASTIPSAKLNLSSVTAINNHLCNTVHQINIAL--GGPGRLENDNVVAEPNNPPTPP 804

Query: 359  AAPP 348
              PP
Sbjct: 805  PPPP 808


>ref|XP_004136201.1| PREDICTED: homeobox-leucine zipper protein ROC3-like [Cucumis
            sativus]
          Length = 803

 Score =  238 bits (607), Expect = 1e-60
 Identities = 126/184 (68%), Positives = 141/184 (76%), Gaps = 2/184 (1%)
 Frame = -3

Query: 893  LDVLSNGNSLHEVAHIANGSHPGNCISLLRINVASNSSQNVELMLQESCTDESGSLVAYT 714
            L+VLSNGNSLHEVAHIANGSHPGNCISLLRINVASNSSQ+VELMLQESCTD+SGSLV Y 
Sbjct: 618  LEVLSNGNSLHEVAHIANGSHPGNCISLLRINVASNSSQHVELMLQESCTDQSGSLVVYA 677

Query: 713  TVDVDAIQLAMNGEDPSCIPLLPLGFVILPMAPS--NNNVGGTQSSNGNILNSGCLLTIG 540
            T+DVD+IQLAM+GEDPSCIPLLP+GF I+P+  S  + +            NSGCLLT+G
Sbjct: 678  TIDVDSIQLAMSGEDPSCIPLLPIGFSIVPIIGSTIDGHPAPPPEDGTPNPNSGCLLTVG 737

Query: 539  LQVLASTIPAAKLSLSSVTAINNHICNTVHQINAALSIGGSXXXXXXXXXXXXXXSVEPP 360
            LQVLASTIP+AKL+LSSVTAINNH+CNTVHQIN AL  GG                  PP
Sbjct: 738  LQVLASTIPSAKLNLSSVTAINNHLCNTVHQINIAL--GGPGRLENDNVVAEPNNPPTPP 795

Query: 359  AAPP 348
              PP
Sbjct: 796  PPPP 799


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