BLASTX nr result

ID: Panax21_contig00021281 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00021281
         (1164 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282076.1| PREDICTED: homeobox protein knotted-1-like 6...   389   e-105
emb|CAN60889.1| hypothetical protein VITISV_041259 [Vitis vinifera]   365   9e-99
ref|XP_002511373.1| homeobox protein knotted-1, putative [Ricinu...   363   4e-98
ref|XP_002318678.1| predicted protein [Populus trichocarpa] gi|2...   347   3e-93
gb|AEO14150.1| KNAT2/6 protein [Eschscholzia californica subsp. ...   347   4e-93

>ref|XP_002282076.1| PREDICTED: homeobox protein knotted-1-like 6 [Vitis vinifera]
            gi|297733756|emb|CBI15003.3| unnamed protein product
            [Vitis vinifera]
          Length = 319

 Score =  389 bits (998), Expect = e-105
 Identities = 200/320 (62%), Positives = 229/320 (71%), Gaps = 8/320 (2%)
 Frame = -2

Query: 1163 TPDFSDQAPLVAFPADFQAFDEQIPIFRSP--------EQMFSGTXXXXXXXXXXIQRNN 1008
            +P  SD      FP +        P F SP        +Q+ S +          +    
Sbjct: 9    SPSSSDYHHPPPFPPENLISPSHYPNFNSPAPFPIFGSDQLLSASSLVVSDAASMVAEIQ 68

Query: 1007 STGSEDDISSAIRAKIASHPLYPKLLQAYIDCQKVGAPLDIANLFEEMGREKYLSRRSAV 828
              GS +++SSAIRAKIA+HPLYPKLL AYI+CQKVGAP ++A L EE+ R   L RR+AV
Sbjct: 69   GGGSGEEVSSAIRAKIATHPLYPKLLHAYIECQKVGAPPEVAYLLEEIRRGSELCRRNAV 128

Query: 827  STDLGDDPELDQFMETYCEVLVKYKSDLARPFNEATVFLKNIETQLHNLCNDTSRTHASG 648
            ST LG DPELD+FMETYC++LVKYKSDLARPF+EAT FL NIETQL+ LCN  SR++ S 
Sbjct: 129  STCLGADPELDEFMETYCDILVKYKSDLARPFDEATAFLNNIETQLNTLCNGASRSYVS- 187

Query: 647  SSTKVGISKYHVGSDEAAASSEEDFGSGEIEVQECSQISEDRELKDKLFRKYSGYISLLK 468
                          DEAA SSEED   GE+EVQEC Q +E++ELKDKL RKYSGYIS LK
Sbjct: 188  --------------DEAAGSSEEDLSGGEVEVQECLQTTENQELKDKLLRKYSGYISTLK 233

Query: 467  HEFSNKKKKAKLPRDARQALLDWWNIHYKWPYPTEADKIALAESTGLDQKQINNWFINQR 288
            HEFS  KKK KLP++ARQALLDWWNIHYKWPYPTE DKIALAESTGLDQKQINNWFINQR
Sbjct: 234  HEFSKTKKKGKLPKEARQALLDWWNIHYKWPYPTEEDKIALAESTGLDQKQINNWFINQR 293

Query: 287  KRHWKPSENMQFDVMESIYG 228
            KRHWKPSENMQF VM+SIYG
Sbjct: 294  KRHWKPSENMQFAVMDSIYG 313


>emb|CAN60889.1| hypothetical protein VITISV_041259 [Vitis vinifera]
          Length = 328

 Score =  365 bits (938), Expect = 9e-99
 Identities = 192/320 (60%), Positives = 222/320 (69%), Gaps = 8/320 (2%)
 Frame = -2

Query: 1163 TPDFSDQAPLVAFPADFQAFDEQIPIFRSP--------EQMFSGTXXXXXXXXXXIQRNN 1008
            +P  SD      FP +        P F SP        +Q+ S +          +    
Sbjct: 9    SPSSSDYHHPPPFPPENLISPSHYPNFNSPAPFPIFGSDQLLSASSLVVSDAASMVAEIQ 68

Query: 1007 STGSEDDISSAIRAKIASHPLYPKLLQAYIDCQKVGAPLDIANLFEEMGREKYLSRRSAV 828
              GS +++SSAIRAKIA+HPLYPKLL AYI+CQKVGAP ++A L EE+ R   L RR AV
Sbjct: 69   GGGSGEEVSSAIRAKIATHPLYPKLLHAYIECQKVGAPPEVAYLLEEIRRGSELCRRXAV 128

Query: 827  STDLGDDPELDQFMETYCEVLVKYKSDLARPFNEATVFLKNIETQLHNLCNDTSRTHASG 648
            ST LG DPELD+FMETYC++LVKYKSDLARPF+EAT     I  + H+L       H   
Sbjct: 129  STCLGADPELDEFMETYCDILVKYKSDLARPFDEATASYM-IAYKKHDLL-----AHVKV 182

Query: 647  SSTKVGISKYHVGSDEAAASSEEDFGSGEIEVQECSQISEDRELKDKLFRKYSGYISLLK 468
                V   K H+ ++EAA SSEED   GE+EVQEC Q +E++ELKDKL RKYSGYIS LK
Sbjct: 183  KPAHVSREKTHMKNNEAAGSSEEDLSGGEVEVQECLQTTENQELKDKLLRKYSGYISTLK 242

Query: 467  HEFSNKKKKAKLPRDARQALLDWWNIHYKWPYPTEADKIALAESTGLDQKQINNWFINQR 288
            HEFS  KKK KLP++ARQALLDWWNIHYKWPYPTE DKIALAESTGLDQKQINNWFINQR
Sbjct: 243  HEFSKTKKKGKLPKEARQALLDWWNIHYKWPYPTEEDKIALAESTGLDQKQINNWFINQR 302

Query: 287  KRHWKPSENMQFDVMESIYG 228
            KRHWKPSENMQF VM+SIYG
Sbjct: 303  KRHWKPSENMQFAVMDSIYG 322


>ref|XP_002511373.1| homeobox protein knotted-1, putative [Ricinus communis]
            gi|223550488|gb|EEF51975.1| homeobox protein knotted-1,
            putative [Ricinus communis]
          Length = 328

 Score =  363 bits (932), Expect = 4e-98
 Identities = 185/309 (59%), Positives = 226/309 (73%), Gaps = 10/309 (3%)
 Frame = -2

Query: 1124 PADFQAFDE---QIPIFRSPEQMFSGTXXXXXXXXXXIQRNNST-----GSEDDISSAIR 969
            P D+ AF       P+  S + +F G+           +          GSE+++SSAIR
Sbjct: 30   PVDYHAFSSPGVSFPLLGS-DHLFPGSSAVSDAASMVAEMQRGVSGGGGGSEEEVSSAIR 88

Query: 968  AKIASHPLYPKLLQAYIDCQKVGAPLDIANLFEEMGREKYLSRR-SAVSTDLGDDPELDQ 792
            AKIA+HPLYPKLLQAYIDCQKVGAP ++A + +E+ +E  LS+R S +++ LG DPELD+
Sbjct: 89   AKIAAHPLYPKLLQAYIDCQKVGAPPEMAYMLDEIRQESDLSKRPSTITSCLGADPELDE 148

Query: 791  FMETYCEVLVKYKSDLARPFNEATVFLKNIETQLHNLCNDT-SRTHASGSSTKVGISKYH 615
            FMETYC++LVKYKSDL+RPFNEAT FL +IE QL+ LCN T SRTH S            
Sbjct: 149  FMETYCDILVKYKSDLSRPFNEATTFLNDIEAQLNTLCNTTTSRTHVS------------ 196

Query: 614  VGSDEAAASSEEDFGSGEIEVQECSQISEDRELKDKLFRKYSGYISLLKHEFSNKKKKAK 435
               DEA  SS+ED   GE+E Q+  + +E+RELKDKL +KYSGYIS LK EFS KKKK K
Sbjct: 197  ---DEAVGSSDEDISGGELEAQDSVRANEERELKDKLLQKYSGYISTLKQEFSKKKKKGK 253

Query: 434  LPRDARQALLDWWNIHYKWPYPTEADKIALAESTGLDQKQINNWFINQRKRHWKPSENMQ 255
            LP++ARQ LL+WWNIHYKWPYPTEADK+ALA++TGLDQKQINNWFINQRKRHWKPSENMQ
Sbjct: 254  LPKEARQILLNWWNIHYKWPYPTEADKVALADATGLDQKQINNWFINQRKRHWKPSENMQ 313

Query: 254  FDVMESIYG 228
            F V++SIYG
Sbjct: 314  FAVVDSIYG 322


>ref|XP_002318678.1| predicted protein [Populus trichocarpa] gi|222859351|gb|EEE96898.1|
            predicted protein [Populus trichocarpa]
          Length = 266

 Score =  347 bits (890), Expect = 3e-93
 Identities = 173/267 (64%), Positives = 212/267 (79%), Gaps = 4/267 (1%)
 Frame = -2

Query: 1016 RNNSTGSEDDISSAIRAKIASHPLYPKLLQAYIDCQKVGAPLDIANLFEEMGREKYLSRR 837
            RNNS    +++S AIRAKIASHPLYPKLL+AYIDCQKVGAP ++A L +E+     +S+ 
Sbjct: 1    RNNS----EEVSCAIRAKIASHPLYPKLLEAYIDCQKVGAPPEMAYLLDEIRLVNDVSKG 56

Query: 836  S--AVSTDLGDDPELDQFMETYCEVLVKYKSDLARPFNEATVFLKNIETQLHNLCNDTSR 663
            S   V++ LG DPELD+FMETYC+VL+KYK+DL+RPF+EAT FL +IE Q + LCN  SR
Sbjct: 57   SNDTVASCLGADPELDEFMETYCDVLMKYKADLSRPFDEATTFLNDIEAQFNTLCNGPSR 116

Query: 662  THASGSSTKVGISKYHVG--SDEAAASSEEDFGSGEIEVQECSQISEDRELKDKLFRKYS 489
            +   G    + +S   +   S+EAA SS+ED   GE  +Q+ ++I+EDRELKDKL RKYS
Sbjct: 117  SQVYGLPLSLSLSILLLSMLSNEAAGSSDEDASGGEAGMQDSTRINEDRELKDKLLRKYS 176

Query: 488  GYISLLKHEFSNKKKKAKLPRDARQALLDWWNIHYKWPYPTEADKIALAESTGLDQKQIN 309
            GYIS LKH FS +KKK KLP++ARQ LL+WWNIH KWPYPTEADK+ALAESTGLDQKQIN
Sbjct: 177  GYISTLKHAFSKQKKKGKLPKEARQILLNWWNIHNKWPYPTEADKVALAESTGLDQKQIN 236

Query: 308  NWFINQRKRHWKPSENMQFDVMESIYG 228
            NWFINQRKRHWKPSENMQF V++S+YG
Sbjct: 237  NWFINQRKRHWKPSENMQFAVVDSLYG 263


>gb|AEO14150.1| KNAT2/6 protein [Eschscholzia californica subsp. californica]
          Length = 355

 Score =  347 bits (889), Expect = 4e-93
 Identities = 174/261 (66%), Positives = 199/261 (76%), Gaps = 1/261 (0%)
 Frame = -2

Query: 1013 NNSTGSEDDISSAIRAKIASHPLYPKLLQAYIDCQKVGAPLDIANLFEEMGREKYLSRRS 834
            N+    E  + S I+AKIASHP YP LL AYIDCQKVGAP++IA L +E+ +E   S+R+
Sbjct: 94   NDDEDDEVMMMSYIKAKIASHPRYPILLDAYIDCQKVGAPMEIACLLDEIRQENDTSKRT 153

Query: 833  AVSTD-LGDDPELDQFMETYCEVLVKYKSDLARPFNEATVFLKNIETQLHNLCNDTSRTH 657
             VST  LGDDPELD FMETYC++LV+YKSDL+RPFNEAT FL  I+ QL NLCN+ S ++
Sbjct: 154  VVSTTCLGDDPELDNFMETYCDILVRYKSDLSRPFNEATTFLNKIQMQLSNLCNNKSSSN 213

Query: 656  ASGSSTKVGISKYHVGSDEAAASSEEDFGSGEIEVQECSQISEDRELKDKLFRKYSGYIS 477
               S++          SDE   SSE+D   GEIEVQE     EDRE+KDKL RKYSGYIS
Sbjct: 214  RISSASAAN-------SDEIVGSSEDDLSGGEIEVQEVQPRLEDREMKDKLLRKYSGYIS 266

Query: 476  LLKHEFSNKKKKAKLPRDARQALLDWWNIHYKWPYPTEADKIALAESTGLDQKQINNWFI 297
             LK EFS KKKK KLP+DARQ L DWWN+H KWPYPTEADKIALAESTGLDQKQINNWFI
Sbjct: 267  SLKQEFSKKKKKGKLPKDARQILFDWWNVHNKWPYPTEADKIALAESTGLDQKQINNWFI 326

Query: 296  NQRKRHWKPSENMQFDVMESI 234
            NQRKRHWKPSENMQF  M+SI
Sbjct: 327  NQRKRHWKPSENMQFGDMDSI 347


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