BLASTX nr result
ID: Panax21_contig00021280
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00021280 (629 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004162101.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-spl... 324 9e-87 ref|XP_004142129.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho... 324 9e-87 ref|XP_003541530.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho... 321 6e-86 ref|XP_003530707.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho... 321 6e-86 ref|XP_002265479.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho... 317 1e-84 >ref|XP_004162101.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-splicing factor CWC22 homolog, partial [Cucumis sativus] Length = 780 Score = 324 bits (830), Expect = 9e-87 Identities = 163/208 (78%), Positives = 176/208 (84%) Frame = +1 Query: 4 KEGTGTINIDAVANSGRSGGVYIPPFKFARMMKEVQDKRSVEYQRMTWDALRKSINGLVN 183 K+ +N D+ +N G+SGGVYIPPFK ARMMKEVQDK S+EYQR+TWDALRKSINGLVN Sbjct: 205 KQTENNLNPDS-SNLGKSGGVYIPPFKLARMMKEVQDKSSIEYQRLTWDALRKSINGLVN 263 Query: 184 KVNSTNMKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKFPEVGD 363 KVN+TN+KNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKFPEVGD Sbjct: 264 KVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKFPEVGD 323 Query: 364 XXXXXXXXXXXXAYKRNDKPQLLAAVKFIAHLVNQQIVHELIAXXXXXXXXXNPTDDSVE 543 AYKRNDKPQLLAAVKFIAHLVNQQ+ HE+IA NPTDDSVE Sbjct: 324 LLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALELLTVLLENPTDDSVE 383 Query: 544 VAVGFVTECGSILQDLCPRGLHGIFERF 627 VAVGFVTECGSIL+DL P+GLHGIFERF Sbjct: 384 VAVGFVTECGSILKDLSPKGLHGIFERF 411 >ref|XP_004142129.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Cucumis sativus] Length = 797 Score = 324 bits (830), Expect = 9e-87 Identities = 163/208 (78%), Positives = 176/208 (84%) Frame = +1 Query: 4 KEGTGTINIDAVANSGRSGGVYIPPFKFARMMKEVQDKRSVEYQRMTWDALRKSINGLVN 183 K+ +N D+ +N G+SGGVYIPPFK ARMMKEVQDK S+EYQR+TWDALRKSINGLVN Sbjct: 205 KQTENNLNPDS-SNLGKSGGVYIPPFKLARMMKEVQDKSSIEYQRLTWDALRKSINGLVN 263 Query: 184 KVNSTNMKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKFPEVGD 363 KVN+TN+KNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKFPEVGD Sbjct: 264 KVNATNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKFPEVGD 323 Query: 364 XXXXXXXXXXXXAYKRNDKPQLLAAVKFIAHLVNQQIVHELIAXXXXXXXXXNPTDDSVE 543 AYKRNDKPQLLAAVKFIAHLVNQQ+ HE+IA NPTDDSVE Sbjct: 324 LLLRRIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALELLTVLLENPTDDSVE 383 Query: 544 VAVGFVTECGSILQDLCPRGLHGIFERF 627 VAVGFVTECGSIL+DL P+GLHGIFERF Sbjct: 384 VAVGFVTECGSILKDLSPKGLHGIFERF 411 >ref|XP_003541530.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Glycine max] Length = 860 Score = 321 bits (823), Expect = 6e-86 Identities = 164/204 (80%), Positives = 172/204 (84%) Frame = +1 Query: 16 GTINIDAVANSGRSGGVYIPPFKFARMMKEVQDKRSVEYQRMTWDALRKSINGLVNKVNS 195 G +N D V+N G+SGGVYIPPFK A MMKEVQDK SVEYQR+TWDALRKSINGLVNKVN+ Sbjct: 272 GNLNGD-VSNLGKSGGVYIPPFKMAMMMKEVQDKSSVEYQRLTWDALRKSINGLVNKVNA 330 Query: 196 TNMKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKFPEVGDXXXX 375 TN+KNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKFPEVGD Sbjct: 331 TNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKFPEVGDLLLR 390 Query: 376 XXXXXXXXAYKRNDKPQLLAAVKFIAHLVNQQIVHELIAXXXXXXXXXNPTDDSVEVAVG 555 AYKRNDKPQLLAAVKFIAHLVNQQ HE+IA PTDDSVEVAVG Sbjct: 391 RIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQAAHEIIALELLTVLLEKPTDDSVEVAVG 450 Query: 556 FVTECGSILQDLCPRGLHGIFERF 627 FVTECGSILQDL P+GLHGIFERF Sbjct: 451 FVTECGSILQDLSPKGLHGIFERF 474 >ref|XP_003530707.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Glycine max] Length = 871 Score = 321 bits (823), Expect = 6e-86 Identities = 164/204 (80%), Positives = 172/204 (84%) Frame = +1 Query: 16 GTINIDAVANSGRSGGVYIPPFKFARMMKEVQDKRSVEYQRMTWDALRKSINGLVNKVNS 195 G +N DA +N G+SGGVYIPPFK A MMKEVQDK SVEYQR+TWDALRKSINGLVNKVN+ Sbjct: 288 GNLNGDA-SNLGKSGGVYIPPFKMAMMMKEVQDKSSVEYQRLTWDALRKSINGLVNKVNA 346 Query: 196 TNMKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKFPEVGDXXXX 375 TN+KNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKFPEVGD Sbjct: 347 TNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKFPEVGDLLLR 406 Query: 376 XXXXXXXXAYKRNDKPQLLAAVKFIAHLVNQQIVHELIAXXXXXXXXXNPTDDSVEVAVG 555 AYKRNDKPQLLAAVKFIAHLVNQQ HE+IA PTDDSVEVAVG Sbjct: 407 RIVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQAAHEIIALELLTVLLEKPTDDSVEVAVG 466 Query: 556 FVTECGSILQDLCPRGLHGIFERF 627 FVTECGSILQDL P+GLHGIFERF Sbjct: 467 FVTECGSILQDLSPKGLHGIFERF 490 >ref|XP_002265479.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Vitis vinifera] Length = 785 Score = 317 bits (811), Expect = 1e-84 Identities = 160/203 (78%), Positives = 172/203 (84%) Frame = +1 Query: 19 TINIDAVANSGRSGGVYIPPFKFARMMKEVQDKRSVEYQRMTWDALRKSINGLVNKVNST 198 ++N D V+N GRSGGVYIPPFK A+MMKEVQDK S+EYQR+TWDALRKSINGLVNKVN+T Sbjct: 193 SLNAD-VSNWGRSGGVYIPPFKLAQMMKEVQDKSSIEYQRLTWDALRKSINGLVNKVNAT 251 Query: 199 NMKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKFPEVGDXXXXX 378 N+KNIIPELF ENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKFPEVG+ Sbjct: 252 NIKNIIPELFGENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKFPEVGELLMRR 311 Query: 379 XXXXXXXAYKRNDKPQLLAAVKFIAHLVNQQIVHELIAXXXXXXXXXNPTDDSVEVAVGF 558 AYKRNDK QLLAAVKFIAHLVNQQ+ HE+IA NPTDDSVEVAVGF Sbjct: 312 IVLQFKRAYKRNDKHQLLAAVKFIAHLVNQQVAHEIIALELLALMLENPTDDSVEVAVGF 371 Query: 559 VTECGSILQDLCPRGLHGIFERF 627 V ECGSILQDL P+GLHGIFERF Sbjct: 372 VKECGSILQDLSPKGLHGIFERF 394