BLASTX nr result

ID: Panax21_contig00021276 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00021276
         (1387 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002535305.1| conserved hypothetical protein [Ricinus comm...   151   2e-64
ref|YP_002608359.1| orf104 [Vitis vinifera] gi|209954156|emb|CAQ...   219   1e-54
ref|YP_173422.1| hypothetical protein NitaMp080 [Nicotiana tabac...   217   5e-54
ref|YP_005090415.1| orf3 gene product (mitochondrion) [Boea hygr...   205   3e-50
emb|CAA39307.1| unnamed protein product [Beta vulgaris subsp. vu...   160   1e-36

>ref|XP_002535305.1| conserved hypothetical protein [Ricinus communis]
           gi|223523491|gb|EEF27078.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 183

 Score =  151 bits (382), Expect(3) = 2e-64
 Identities = 72/85 (84%), Positives = 74/85 (87%)
 Frame = -3

Query: 614 PAFRSIHS*GGRSRTLQVWERSWSGKAKTAPRIWVARGRLCPDGGALWGRAQPNRDSTPP 435
           P + S+   G R   L VWERSWSGKAKTAPRIWVARGRLCPDGGALWGRAQPNRDSTPP
Sbjct: 28  PGYHSMS--GIRGDILDVWERSWSGKAKTAPRIWVARGRLCPDGGALWGRAQPNRDSTPP 85

Query: 434 TSSAPLYRLNHSKGLVGGTGEPREL 360
           TSSAPLYRLNHS GLVGGTGEPREL
Sbjct: 86  TSSAPLYRLNHSNGLVGGTGEPREL 110



 Score =  109 bits (273), Expect(3) = 2e-64
 Identities = 51/54 (94%), Positives = 51/54 (94%)
 Frame = -2

Query: 210 GKKGPKHGRCRTLEWQRKARPYLFFQACSDIRFPRKIKLVSRVMGNLPARFGEH 49
           GKKGPKH RCRTLEWQRKA  YLFFQACSDIRFPRKIKLVSRVMGNLPARFGEH
Sbjct: 130 GKKGPKHLRCRTLEWQRKAGSYLFFQACSDIRFPRKIKLVSRVMGNLPARFGEH 183



 Score = 33.5 bits (75), Expect(3) = 2e-64
 Identities = 18/20 (90%), Positives = 18/20 (90%)
 Frame = -1

Query: 265 QACTPYLRLLRQAVDSFIRE 206
           QACT  LRLLRQAVDSFIRE
Sbjct: 112 QACT--LRLLRQAVDSFIRE 129



 Score = 89.4 bits (220), Expect = 2e-15
 Identities = 40/43 (93%), Positives = 42/43 (97%)
 Frame = -1

Query: 772 MNCRIDRSDPDAAVAPRRYGLDPLLPTPGHHSMSGIRGDILDV 644
           MNCR+DRSDPDAAVAPRRYGLDPLLP PG+HSMSGIRGDILDV
Sbjct: 1   MNCRVDRSDPDAAVAPRRYGLDPLLPIPGYHSMSGIRGDILDV 43


>ref|YP_002608359.1| orf104 [Vitis vinifera] gi|209954156|emb|CAQ77593.1| orf104 [Vitis
           vinifera] gi|239764779|gb|ACS15247.1| ORF104 [Vitis
           vinifera]
          Length = 103

 Score =  219 bits (558), Expect = 1e-54
 Identities = 100/103 (97%), Positives = 101/103 (98%)
 Frame = +1

Query: 517 MRGAVLAFPDQDRSHTCSVRDRPPQLCIDRKAGRHSPQPREWLRPVCPPLFPTCYGAPGW 696
           MRGAVLA PDQDRSHTCSVRDRPPQLCIDRKAGRHSPQPREWLRPVCPPLFPTCYGAPGW
Sbjct: 1   MRGAVLALPDQDRSHTCSVRDRPPQLCIDRKAGRHSPQPREWLRPVCPPLFPTCYGAPGW 60

Query: 697 VGAGRVRIAAEQQPRPDLIYLFGNSSGDFTVAKEAPRSIKHFR 825
           +GAGRVRIAAEQQPRPDLIYL GNSSGDFTVAKEAPRSIKHFR
Sbjct: 61  IGAGRVRIAAEQQPRPDLIYLLGNSSGDFTVAKEAPRSIKHFR 103


>ref|YP_173422.1| hypothetical protein NitaMp080 [Nicotiana tabacum]
           gi|56806586|dbj|BAD83487.1| hypothetical protein
           (mitochondrion) [Nicotiana tabacum]
          Length = 103

 Score =  217 bits (553), Expect = 5e-54
 Identities = 100/103 (97%), Positives = 100/103 (97%)
 Frame = +1

Query: 517 MRGAVLAFPDQDRSHTCSVRDRPPQLCIDRKAGRHSPQPREWLRPVCPPLFPTCYGAPGW 696
           MRGAVLAFPDQDRSHTCSVRDRPPQLCIDRKAGRHSPQPREWLRPVCPPLFPTCYG P W
Sbjct: 1   MRGAVLAFPDQDRSHTCSVRDRPPQLCIDRKAGRHSPQPREWLRPVCPPLFPTCYGTPEW 60

Query: 697 VGAGRVRIAAEQQPRPDLIYLFGNSSGDFTVAKEAPRSIKHFR 825
           VGAGRVRIAAEQQPRPDLIYL GNSSGDFTVAKEAPRSIKHFR
Sbjct: 61  VGAGRVRIAAEQQPRPDLIYLLGNSSGDFTVAKEAPRSIKHFR 103


>ref|YP_005090415.1| orf3 gene product (mitochondrion) [Boea hygrometrica]
           gi|340549503|gb|AEK53324.1| hypothetical protein
           (mitochondrion) [Boea hygrometrica]
          Length = 103

 Score =  205 bits (521), Expect = 3e-50
 Identities = 95/103 (92%), Positives = 96/103 (93%)
 Frame = +1

Query: 517 MRGAVLAFPDQDRSHTCSVRDRPPQLCIDRKAGRHSPQPREWLRPVCPPLFPTCYGAPGW 696
           MRGAVLAFPDQDRSHTCSVRDRPPQLCIDR+ GRHSPQ RE LRPVCPPLFPTCYGAPGW
Sbjct: 1   MRGAVLAFPDQDRSHTCSVRDRPPQLCIDRRGGRHSPQQRECLRPVCPPLFPTCYGAPGW 60

Query: 697 VGAGRVRIAAEQQPRPDLIYLFGNSSGDFTVAKEAPRSIKHFR 825
           VGAGR R AAEQQPRPDLIYL GNSS DFTVAKEAPRSIKHFR
Sbjct: 61  VGAGRARSAAEQQPRPDLIYLLGNSSSDFTVAKEAPRSIKHFR 103


>emb|CAA39307.1| unnamed protein product [Beta vulgaris subsp. vulgaris]
          Length = 153

 Score =  160 bits (404), Expect = 1e-36
 Identities = 81/98 (82%), Positives = 81/98 (82%)
 Frame = -2

Query: 1065 CHCLIFCCLITLEIMYLLIVFLPLLGSSVAGFFGRFLGSEGTAXXXXXXXXXXXXXXXIA 886
            CHCLIF CLITLEIMYLLIVFLPLLGSSVAGFFGRFLGSEGTA               IA
Sbjct: 56   CHCLIFGCLITLEIMYLLIVFLPLLGSSVAGFFGRFLGSEGTAIVTTTCVSFSSILSLIA 115

Query: 885  FYEVALGASACYLRIAPWISSEMFDASWGFFGDREVTG 772
            FYEVA GASACYLRIAPWISSEMFDASWGFFGDREVTG
Sbjct: 116  FYEVAPGASACYLRIAPWISSEMFDASWGFFGDREVTG 153


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