BLASTX nr result

ID: Panax21_contig00021256 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00021256
         (748 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15756.3| unnamed protein product [Vitis vinifera]              199   4e-49
ref|XP_002280892.2| PREDICTED: protein MEI2-like 4-like [Vitis v...   192   8e-47
ref|XP_002511091.1| RNA-binding protein, putative [Ricinus commu...   174   1e-41
ref|XP_002267714.2| PREDICTED: protein MEI2-like 4-like [Vitis v...   143   3e-32
emb|CBI29257.3| unnamed protein product [Vitis vinifera]              143   3e-32

>emb|CBI15756.3| unnamed protein product [Vitis vinifera]
          Length = 998

 Score =  199 bits (507), Expect = 4e-49
 Identities = 122/256 (47%), Positives = 162/256 (63%), Gaps = 11/256 (4%)
 Frame = +1

Query: 4    GTLVVFNHDSLVSNDELRQIFGSFGEMKEIGKT--LQYQRFIEFYDIRAAEAAFCALNRK 177
            GTLVVFN DS VSND+LRQIFG +GE+KEI +T   ++ +FIEF+D+RAAEAA  ALNR 
Sbjct: 365  GTLVVFNLDSSVSNDDLRQIFGIYGEIKEIRETPHKRHHKFIEFFDVRAAEAALRALNRS 424

Query: 178  NISGKQIKLELSHPGGERQCSMQEFSPVPAQDERSRCDSLTDTSSSEQIVNVPPAPLTTS 357
            +I+GK+IKLE S PGG R+C MQ  S    QDE   C S  D  SS   + V P   T+S
Sbjct: 425  DIAGKRIKLEPSRPGGSRRCLMQLCSSELEQDESILCQSPDDNLSS-GCMAVSPGIKTSS 483

Query: 358  CIYGGSICGLHTKSEMNGSGFNENAFSQGRFSVPNSF--PVRVATICDQFGLRESRHSLD 531
            C+   SI  LH+   M    F ENA S G  SVPN+   P+RV +I ++FGL E+ ++LD
Sbjct: 484  CMDNVSIQDLHSAVRMPIGSFVENATSHGSSSVPNTLPSPMRVVSIINEFGLGETSNTLD 543

Query: 532  EGKSGN------HLHSLPENYDGSTNEVPYDPFSTVANLAIDVGPRILEGMNDRYIY-IT 690
            + K GN      H HSLPE +D   N + Y+  ST+ ++   VGPRI EG+++R+I+ + 
Sbjct: 544  QMKFGNQSFPNYHPHSLPEYHDNLANAIRYNSSSTIGDMTGHVGPRITEGIDNRHIHRVG 603

Query: 691  DSCQQAEHYEGVFGTS 738
             +    E   G FG+S
Sbjct: 604  SNGHPIELNGGAFGSS 619


>ref|XP_002280892.2| PREDICTED: protein MEI2-like 4-like [Vitis vinifera]
          Length = 991

 Score =  192 bits (487), Expect = 8e-47
 Identities = 121/256 (47%), Positives = 161/256 (62%), Gaps = 11/256 (4%)
 Frame = +1

Query: 4    GTLVVFNHDSLVSNDELRQIFGSFGEMKEIGKT--LQYQRFIEFYDIRAAEAAFCALNRK 177
            GTLVVFN DS VSND+LRQIFG +GE+KEI +T   ++ +FIEF+D+RAAEAA  ALNR 
Sbjct: 359  GTLVVFNLDSSVSNDDLRQIFGIYGEIKEIRETPHKRHHKFIEFFDVRAAEAALRALNRS 418

Query: 178  NISGKQIKLELSHPGGERQCSMQEFSPVPAQDERSRCDSLTDTSSSEQIVNVPPAPLTTS 357
            +I+GK+IKLE S PGG R+  MQ  S    QDE   C S  D  SS   + V P   T+S
Sbjct: 419  DIAGKRIKLEPSRPGGSRRL-MQLCSSELEQDESILCQSPDDNLSS-GCMAVSPGIKTSS 476

Query: 358  CIYGGSICGLHTKSEMNGSGFNENAFSQGRFSVPNSF--PVRVATICDQFGLRESRHSLD 531
            C+   SI  LH+   M    F ENA S G  SVPN+   P+RV +I ++FGL E+ ++LD
Sbjct: 477  CMDNVSIQDLHSAVRMPIGSFVENATSHGSSSVPNTLPSPMRVVSIINEFGLGETSNTLD 536

Query: 532  EGKSGN------HLHSLPENYDGSTNEVPYDPFSTVANLAIDVGPRILEGMNDRYIY-IT 690
            + K GN      H HSLPE +D   N + Y+  ST+ ++   VGPRI EG+++R+I+ + 
Sbjct: 537  QMKFGNQSFPNYHPHSLPEYHDNLANAIRYNSSSTIGDMTGHVGPRITEGIDNRHIHRVG 596

Query: 691  DSCQQAEHYEGVFGTS 738
             +    E   G FG+S
Sbjct: 597  SNGHPIELNGGAFGSS 612


>ref|XP_002511091.1| RNA-binding protein, putative [Ricinus communis]
            gi|223550206|gb|EEF51693.1| RNA-binding protein, putative
            [Ricinus communis]
          Length = 972

 Score =  174 bits (442), Expect = 1e-41
 Identities = 109/256 (42%), Positives = 151/256 (58%), Gaps = 11/256 (4%)
 Frame = +1

Query: 4    GTLVVFNHDSLVSNDELRQIFGSFGEMKEIGKT--LQYQRFIEFYDIRAAEAAFCALNRK 177
            GTLV+FN DS VS +EL +IFG +GE+KEI +T   ++ +FIE+YDIR+AEAA  ALNR 
Sbjct: 358  GTLVIFNLDSSVSTEELHKIFGVYGEIKEIRETPHKRHHKFIEYYDIRSAEAALSALNRS 417

Query: 178  NISGKQIKLELSHPGGERQCSMQEFSPVPAQDERSRCDSLTDTSSSEQIVNVPPAPLTTS 357
            +I+GKQIKLE S PGG R+   +   P   QDE   C S  +  SS ++    P  + +S
Sbjct: 418  DIAGKQIKLEPSRPGGTRRLMTK---PEQEQDESGLCQSPFEDLSSGRLATFSPGVIASS 474

Query: 358  CIYGGSICGLHTKSEMNGSGFNENAFSQGRFSVPNSF--PVRVATICDQFGLRESRHSLD 531
            C+  GS   +H+  +     F E+  S    SVPN+   PV V +I  QFGL E   S+D
Sbjct: 475  CMENGSTQVIHSAIQSPVGSFIESHRSS---SVPNNLPSPVSVTSISKQFGLHEPNRSMD 531

Query: 532  EGKSGN------HLHSLPENYDGSTNEVPYDPFSTVANLAIDVGPRILEGMNDRYIY-IT 690
            E   GN      H HSLPE  DG  N VP++  S++  +A  VG ++ EG++ R+I  ++
Sbjct: 532  EMMFGNQRIPSFHPHSLPEYPDGLANGVPFNSSSSIGGMAHSVGSKVTEGISSRHIQAVS 591

Query: 691  DSCQQAEHYEGVFGTS 738
             +    E   GVFG+S
Sbjct: 592  SNGHLMELNGGVFGSS 607


>ref|XP_002267714.2| PREDICTED: protein MEI2-like 4-like [Vitis vinifera]
          Length = 965

 Score =  143 bits (361), Expect = 3e-32
 Identities = 105/259 (40%), Positives = 139/259 (53%), Gaps = 14/259 (5%)
 Frame = +1

Query: 4    GTLVVFNHDSLVSNDELRQIFGSFGEMKEIGKT--LQYQRFIEFYDIRAAEAAFCALNRK 177
            GTLVVFN D  V+NDEL QIFG +GE+KEI +T    + +F+EFYDIRAAEAA  ALNR 
Sbjct: 335  GTLVVFNLDPSVTNDELLQIFGVYGEIKEIRETPHRSHHKFVEFYDIRAAEAALRALNRS 394

Query: 178  NISGKQIKLELSHPGGERQCSMQEFSPVPAQDERSRCDSLTDTSSSEQIVNVPPAPL--- 348
            +I+GK+IKLE S PGG R+  MQ+F     +DE        +T ++       PA L   
Sbjct: 395  DIAGKRIKLEPSRPGGARRL-MQQFPSELEEDESGLYLQQNNTPNNSTTGFPGPASLGAI 453

Query: 349  TTSCIYGGSICGLHTKSEMNGSGFNENAFSQG-RFSVPNSFP--VRVATICDQFGLRESR 519
            T+S +  G+I G+H+        F EN    G   SVPN+ P  + V ++  Q GL ES 
Sbjct: 454  TSSSMENGTIMGVHSGIPFPIRPFLENVSHHGISSSVPNTLPSLLSVESVGSQSGLAESS 513

Query: 520  HSLDE------GKSGNHLHSLPENYDGSTNEVPYDPFSTVANLAIDVGPRILEGMNDRYI 681
             S  +      G    H HSLPE  DG  N  P +P   V  +A ++ PR     N +  
Sbjct: 514  RSQGQLKFDFRGTQSLHPHSLPEYNDGLANGAPCNP---VGTMAANINPRPERIENRQLS 570

Query: 682  YITDSCQQAEHYEGVFGTS 738
                +    E  +GVFG+S
Sbjct: 571  GANSNGLTVELNDGVFGSS 589


>emb|CBI29257.3| unnamed protein product [Vitis vinifera]
          Length = 986

 Score =  143 bits (361), Expect = 3e-32
 Identities = 105/259 (40%), Positives = 139/259 (53%), Gaps = 14/259 (5%)
 Frame = +1

Query: 4    GTLVVFNHDSLVSNDELRQIFGSFGEMKEIGKT--LQYQRFIEFYDIRAAEAAFCALNRK 177
            GTLVVFN D  V+NDEL QIFG +GE+KEI +T    + +F+EFYDIRAAEAA  ALNR 
Sbjct: 356  GTLVVFNLDPSVTNDELLQIFGVYGEIKEIRETPHRSHHKFVEFYDIRAAEAALRALNRS 415

Query: 178  NISGKQIKLELSHPGGERQCSMQEFSPVPAQDERSRCDSLTDTSSSEQIVNVPPAPL--- 348
            +I+GK+IKLE S PGG R+  MQ+F     +DE        +T ++       PA L   
Sbjct: 416  DIAGKRIKLEPSRPGGARRL-MQQFPSELEEDESGLYLQQNNTPNNSTTGFPGPASLGAI 474

Query: 349  TTSCIYGGSICGLHTKSEMNGSGFNENAFSQG-RFSVPNSFP--VRVATICDQFGLRESR 519
            T+S +  G+I G+H+        F EN    G   SVPN+ P  + V ++  Q GL ES 
Sbjct: 475  TSSSMENGTIMGVHSGIPFPIRPFLENVSHHGISSSVPNTLPSLLSVESVGSQSGLAESS 534

Query: 520  HSLDE------GKSGNHLHSLPENYDGSTNEVPYDPFSTVANLAIDVGPRILEGMNDRYI 681
             S  +      G    H HSLPE  DG  N  P +P   V  +A ++ PR     N +  
Sbjct: 535  RSQGQLKFDFRGTQSLHPHSLPEYNDGLANGAPCNP---VGTMAANINPRPERIENRQLS 591

Query: 682  YITDSCQQAEHYEGVFGTS 738
                +    E  +GVFG+S
Sbjct: 592  GANSNGLTVELNDGVFGSS 610


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