BLASTX nr result

ID: Panax21_contig00021251 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00021251
         (1393 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39133.3| unnamed protein product [Vitis vinifera]              289   1e-75
ref|XP_002270470.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   289   1e-75
ref|XP_002524083.1| Ubiquitin carboxyl-terminal hydrolase, putat...   285   2e-74
ref|XP_002515876.1| Ubiquitin carboxyl-terminal hydrolase, putat...   280   6e-73
ref|XP_003632213.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   273   6e-71

>emb|CBI39133.3| unnamed protein product [Vitis vinifera]
          Length = 1092

 Score =  289 bits (739), Expect = 1e-75
 Identities = 150/253 (59%), Positives = 181/253 (71%), Gaps = 1/253 (0%)
 Frame = +3

Query: 6    KQFLKLLDPFLMSVEDSLIEYDDALNTGNDDANTKD-VSSAVAXXXXXXXXXXXXXXNSE 182
            KQFLKLLDPF M  EDSL +   A N  N+D   +D +SS V+              +SE
Sbjct: 808  KQFLKLLDPFFMPTEDSLDDIT-AGNAANEDTEMEDAISSTVSNGDANS--------DSE 858

Query: 183  FDYDPDVENDFQFFLGESEFASVGPKIQMNEALPISSSCRKFNVIVSWSDKMIELYDTAL 362
               +  + N+F F+L + + ++ G  I MN+   IS   R+ NV+V W  +MIE YDT L
Sbjct: 859  TGDELQLGNNFSFYLTDEKGSTKGSNINMNKLELISQLPRRLNVLVHWPYRMIEKYDTCL 918

Query: 363  LSSLPEICKPAFLAKKLQETVSLYECLEAFLKEEPLGPEDMWYCPKCKEHRQASKKLDLW 542
            LS LPEICKP   AK+ QE+VSLY+CLEAFLKEEPLGPEDMW CP CK+HRQASKKLDLW
Sbjct: 919  LSLLPEICKPELFAKRPQESVSLYKCLEAFLKEEPLGPEDMWNCPCCKKHRQASKKLDLW 978

Query: 543  RLPEILVIHLKRFSYNRIFKNKLETFVDFPIEDLDLSTYTVHKSSKVSHRYVLYAISNHY 722
            RLPEILVIHLKRFSY+R +KNKLETF+DFPI+DLDLSTY   K+S +S+ Y LYAI NHY
Sbjct: 979  RLPEILVIHLKRFSYSRFWKNKLETFIDFPIDDLDLSTYIAQKNSHLSNHYKLYAICNHY 1038

Query: 723  GSLGGGHYTAFVQ 761
            G +G GHYTAFV+
Sbjct: 1039 GGMGSGHYTAFVR 1051


>ref|XP_002270470.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Vitis
            vinifera]
          Length = 961

 Score =  289 bits (739), Expect = 1e-75
 Identities = 150/253 (59%), Positives = 181/253 (71%), Gaps = 1/253 (0%)
 Frame = +3

Query: 6    KQFLKLLDPFLMSVEDSLIEYDDALNTGNDDANTKD-VSSAVAXXXXXXXXXXXXXXNSE 182
            KQFLKLLDPF M  EDSL +   A N  N+D   +D +SS V+              +SE
Sbjct: 677  KQFLKLLDPFFMPTEDSLDDIT-AGNAANEDTEMEDAISSTVSNGDANS--------DSE 727

Query: 183  FDYDPDVENDFQFFLGESEFASVGPKIQMNEALPISSSCRKFNVIVSWSDKMIELYDTAL 362
               +  + N+F F+L + + ++ G  I MN+   IS   R+ NV+V W  +MIE YDT L
Sbjct: 728  TGDELQLGNNFSFYLTDEKGSTKGSNINMNKLELISQLPRRLNVLVHWPYRMIEKYDTCL 787

Query: 363  LSSLPEICKPAFLAKKLQETVSLYECLEAFLKEEPLGPEDMWYCPKCKEHRQASKKLDLW 542
            LS LPEICKP   AK+ QE+VSLY+CLEAFLKEEPLGPEDMW CP CK+HRQASKKLDLW
Sbjct: 788  LSLLPEICKPELFAKRPQESVSLYKCLEAFLKEEPLGPEDMWNCPCCKKHRQASKKLDLW 847

Query: 543  RLPEILVIHLKRFSYNRIFKNKLETFVDFPIEDLDLSTYTVHKSSKVSHRYVLYAISNHY 722
            RLPEILVIHLKRFSY+R +KNKLETF+DFPI+DLDLSTY   K+S +S+ Y LYAI NHY
Sbjct: 848  RLPEILVIHLKRFSYSRFWKNKLETFIDFPIDDLDLSTYIAQKNSHLSNHYKLYAICNHY 907

Query: 723  GSLGGGHYTAFVQ 761
            G +G GHYTAFV+
Sbjct: 908  GGMGSGHYTAFVR 920


>ref|XP_002524083.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
           gi|223536651|gb|EEF38293.1| Ubiquitin carboxyl-terminal
           hydrolase, putative [Ricinus communis]
          Length = 506

 Score =  285 bits (730), Expect = 2e-74
 Identities = 147/256 (57%), Positives = 179/256 (69%), Gaps = 4/256 (1%)
 Frame = +3

Query: 3   RKQFLKLLDPFLMSVEDSLI-EYDDALNTGNDDANTKDVSSAVAXXXXXXXXXXXXXXNS 179
           RKQ+LK+L+PFLM  +D ++ +YDD   T NDD+   D+ S                 + 
Sbjct: 227 RKQYLKVLNPFLMPADDDILNDYDDLGITANDDSAMADIPSPTVSENNAGS-------DG 279

Query: 180 EFDYDPDVENDFQFF---LGESEFASVGPKIQMNEALPISSSCRKFNVIVSWSDKMIELY 350
           E D D    ++FQ     LGES       +IQM++  PI    ++F V VSWS KMIE Y
Sbjct: 280 ETDDDSLFSSEFQINMTNLGESA------EIQMSKPSPIPKFNKRFEVYVSWSKKMIEKY 333

Query: 351 DTALLSSLPEICKPAFLAKKLQETVSLYECLEAFLKEEPLGPEDMWYCPKCKEHRQASKK 530
           DT +LSSLPE+ KP    ++ QE+VSLY+CLEAFLKEEPLGPEDMW+CP CK+HRQASKK
Sbjct: 334 DTCILSSLPEVFKPQLYTRRPQESVSLYKCLEAFLKEEPLGPEDMWFCPACKKHRQASKK 393

Query: 531 LDLWRLPEILVIHLKRFSYNRIFKNKLETFVDFPIEDLDLSTYTVHKSSKVSHRYVLYAI 710
           LDLWRLPEILV+HLKRFSY+R+ KNKLET VDFP+ED DLSTY   K  + S+RY LYAI
Sbjct: 394 LDLWRLPEILVVHLKRFSYSRVIKNKLETHVDFPVEDFDLSTYISRKDGQFSYRYELYAI 453

Query: 711 SNHYGSLGGGHYTAFV 758
           SNHYG +GGGHYTAFV
Sbjct: 454 SNHYGGMGGGHYTAFV 469


>ref|XP_002515876.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
            gi|223545031|gb|EEF46545.1| Ubiquitin carboxyl-terminal
            hydrolase, putative [Ricinus communis]
          Length = 889

 Score =  280 bits (716), Expect = 6e-73
 Identities = 133/249 (53%), Positives = 177/249 (71%)
 Frame = +3

Query: 12   FLKLLDPFLMSVEDSLIEYDDALNTGNDDANTKDVSSAVAXXXXXXXXXXXXXXNSEFDY 191
            +LKLL PF +  +D +   ++  +T  ++   KD   + +              +S +  
Sbjct: 609  YLKLLSPFHIPADDGMYSCNNTTSTAKEEITEKDNGCSASHGNANPSIVEEATNSSSY-- 666

Query: 192  DPDVENDFQFFLGESEFASVGPKIQMNEALPISSSCRKFNVIVSWSDKMIELYDTALLSS 371
                 ++ QF++ + +      KI +NE +P++   ++FNV+V W++K IE YDT LLSS
Sbjct: 667  -----SELQFYITDEKGIVQDLKIGINEPVPVTGVPKRFNVLVCWTEKQIEQYDTRLLSS 721

Query: 372  LPEICKPAFLAKKLQETVSLYECLEAFLKEEPLGPEDMWYCPKCKEHRQASKKLDLWRLP 551
            LPE+ K  FLAK+ QE+VSLY+CLEAFLKEEPLGP+DMW+CP CK+HRQASKKLDLWRLP
Sbjct: 722  LPEVFKSGFLAKRPQESVSLYKCLEAFLKEEPLGPDDMWFCPSCKKHRQASKKLDLWRLP 781

Query: 552  EILVIHLKRFSYNRIFKNKLETFVDFPIEDLDLSTYTVHKSSKVSHRYVLYAISNHYGSL 731
            EILVIHLKRFSY R  KNKLE +VDFP++DLDLS Y  +K+ ++SHRY+LYAISNHYGS+
Sbjct: 782  EILVIHLKRFSYTRFMKNKLEAYVDFPVDDLDLSAYISYKNGQLSHRYMLYAISNHYGSM 841

Query: 732  GGGHYTAFV 758
            GGGHYTAFV
Sbjct: 842  GGGHYTAFV 850


>ref|XP_003632213.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Vitis
            vinifera]
          Length = 882

 Score =  273 bits (699), Expect = 6e-71
 Identities = 138/251 (54%), Positives = 177/251 (70%), Gaps = 2/251 (0%)
 Frame = +3

Query: 12   FLKLLDPFLMSVEDSLIEYDDALNTGNDDANTKDVSSAVAXXXXXXXXXXXXXXN--SEF 185
            +LKL++PF ++ E           + N D++ K V   V               N  +E 
Sbjct: 604  YLKLINPFQITSEGI---------SNNSDSSEKTVIEEVKELKDAISPVLSAGVNGINEI 654

Query: 186  DYDPDVENDFQFFLGESEFASVGPKIQMNEALPISSSCRKFNVIVSWSDKMIELYDTALL 365
              DPD + + QF+L + + A+   K+ M+E  P++   R+ N++V W +K IE YDT L+
Sbjct: 655  WVDPDSDAELQFYLTDDKGATRASKLVMDE--PVTRLPRRLNLLVFWPEKKIEQYDTHLI 712

Query: 366  SSLPEICKPAFLAKKLQETVSLYECLEAFLKEEPLGPEDMWYCPKCKEHRQASKKLDLWR 545
            SSLPEI K  F+A++ QE+VSLY CLEAFLKEEPLGP+DMWYCP CK HRQASKKLDLWR
Sbjct: 713  SSLPEIFKSGFIARRPQESVSLYRCLEAFLKEEPLGPDDMWYCPGCKTHRQASKKLDLWR 772

Query: 546  LPEILVIHLKRFSYNRIFKNKLETFVDFPIEDLDLSTYTVHKSSKVSHRYVLYAISNHYG 725
            LPEILVIHLKRFSY+R  KNKLET+VDFP+++LDLSTY  HK+  VS+RY+LYA+SNHYG
Sbjct: 773  LPEILVIHLKRFSYSRFMKNKLETYVDFPVDNLDLSTYITHKNGMVSNRYMLYAVSNHYG 832

Query: 726  SLGGGHYTAFV 758
            S+GGGHYTAFV
Sbjct: 833  SMGGGHYTAFV 843


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