BLASTX nr result

ID: Panax21_contig00021248 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00021248
         (968 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285458.1| PREDICTED: rab3 GTPase-activating protein no...   534   e-149
ref|XP_003540058.1| PREDICTED: rab3 GTPase-activating protein no...   500   e-139
ref|XP_003525975.1| PREDICTED: rab3 GTPase-activating protein no...   488   e-135
ref|XP_002331804.1| predicted protein [Populus trichocarpa] gi|2...   486   e-135
ref|XP_002524520.1| rab3 gtpase-activating protein non-catalytic...   481   e-133

>ref|XP_002285458.1| PREDICTED: rab3 GTPase-activating protein non-catalytic subunit
            [Vitis vinifera] gi|302142895|emb|CBI20190.3| unnamed
            protein product [Vitis vinifera]
          Length = 457

 Score =  534 bits (1375), Expect = e-149
 Identities = 269/318 (84%), Positives = 287/318 (90%), Gaps = 3/318 (0%)
 Frame = -1

Query: 968  EDTSSEEVCIVLAGVIARFDGSDIQSMLRRWFQETHTQFWDQMXXXXXXXXXXXXXGRLP 789
            + +SSEEVC+V+ GVIARFDG+D+QSML+RWFQ+TH+QFWD+              GRLP
Sbjct: 139  QGSSSEEVCVVMPGVIARFDGADLQSMLQRWFQDTHSQFWDEKPKRRDQEDSEKSYGRLP 198

Query: 788  YQLWNVSKYGSCADAAITGIMPPPLMELQSSQRYYCAVTVGNDAVISAFRLSEDRKRSLV 609
            YQLWNVSKYG CADAAITG MPPPLMELQSSQRYYCAVT+G+DAVISAFRLSEDR RSLV
Sbjct: 199  YQLWNVSKYGPCADAAITGTMPPPLMELQSSQRYYCAVTIGDDAVISAFRLSEDRNRSLV 258

Query: 608  GAILSKVVPATFSTIASFSKMFWRSEQNSVKKPEPKPQPFARASPLTCLKDHPRKGEKLT 429
            GAILSKVVPATFSTIASFSKM WRSEQ S K+ EPKPQPFARASPLTCLKDHPRKGEKLT
Sbjct: 259  GAILSKVVPATFSTIASFSKMIWRSEQKSPKRSEPKPQPFARASPLTCLKDHPRKGEKLT 318

Query: 428  LSPSGTLAAITDSLGRILLLDTQALVVVRLWKGYRDASCLFVEMLVNRDTAA-SSSYHEY 252
            LSPSGTLAAITDSLGRILLLDTQALVVVRLWKGYRDASCLF EMLV++DTAA SSSY+E 
Sbjct: 319  LSPSGTLAAITDSLGRILLLDTQALVVVRLWKGYRDASCLFTEMLVSKDTAASSSSYYEP 378

Query: 251  VKSDYCLCLAIHAPRKGIVEVWQMRTGPRIRTVQCTKGSKILQPTYRFGSS--SSYVPLE 78
            VKSDYCLCLAIHAPRKGIVEVWQMRTGPR+ TVQC+KGSKILQPTYRFGSS  S YVPLE
Sbjct: 379  VKSDYCLCLAIHAPRKGIVEVWQMRTGPRLLTVQCSKGSKILQPTYRFGSSMGSPYVPLE 438

Query: 77   VFFLNGDSGQLSVLNRSL 24
            VF LNGDSGQLSVLNRSL
Sbjct: 439  VFLLNGDSGQLSVLNRSL 456


>ref|XP_003540058.1| PREDICTED: rab3 GTPase-activating protein non-catalytic subunit-like
            [Glycine max]
          Length = 459

 Score =  500 bits (1287), Expect = e-139
 Identities = 245/319 (76%), Positives = 282/319 (88%), Gaps = 4/319 (1%)
 Frame = -1

Query: 968  EDTSSEEVCIVLAGVIARFDGSDIQSMLRRWFQETHTQFWDQMXXXXXXXXXXXXXGRLP 789
            +DTSSEE C++++GVIA FDGSDIQ+ML++WF+E+H++FWDQ               ++P
Sbjct: 139  QDTSSEEFCLIMSGVIAHFDGSDIQNMLQKWFEESHSRFWDQNPKSHDSEDFGNTDVKIP 198

Query: 788  YQLWNVSKYGSCADAAITGIMPPPLMELQ-SSQRYYCAVTVGNDAVISAFRLSEDRKRSL 612
            YQLWN+ KYG+CA+AAITGIMPPPLME Q SSQRYYCAV VG DAVISA+RLSE++ RSL
Sbjct: 199  YQLWNIGKYGTCAEAAITGIMPPPLMEQQQSSQRYYCAVAVGEDAVISAYRLSENKGRSL 258

Query: 611  VGAILSKVVPATFSTIASFSKMFWRSEQNSVKKPEPKPQPFARASPLTCLKDHPRKGEKL 432
            VGAILSKVVPATFSTI+SFSK+ WRSEQ+S KK + KPQPFARASPLTCLKDHPRKGEKL
Sbjct: 259  VGAILSKVVPATFSTISSFSKLIWRSEQSSPKKSDQKPQPFARASPLTCLKDHPRKGEKL 318

Query: 431  TLSPSGTLAAITDSLGRILLLDTQALVVVRLWKGYRDASCLFVEMLVNRDTA-ASSSYHE 255
            TLSPSGTLAAITDSLGRILLLDTQALVVVRLWKGYRDASCLF+EMLVN+D A +SSSY E
Sbjct: 319  TLSPSGTLAAITDSLGRILLLDTQALVVVRLWKGYRDASCLFMEMLVNKDIASSSSSYSE 378

Query: 254  YVKSDYCLCLAIHAPRKGIVEVWQMRTGPRIRTVQCTKGSKILQPTYRFGS--SSSYVPL 81
             +KSDYCLCLAIHAPRKGI+E+WQMRTGPR+RT+ C KGSK+LQP+YRFG+  SS YVPL
Sbjct: 379  PLKSDYCLCLAIHAPRKGIIEIWQMRTGPRLRTISCAKGSKMLQPSYRFGASMSSPYVPL 438

Query: 80   EVFFLNGDSGQLSVLNRSL 24
            EVF LNGDSGQ+SVLNR+L
Sbjct: 439  EVFLLNGDSGQISVLNRTL 457


>ref|XP_003525975.1| PREDICTED: rab3 GTPase-activating protein non-catalytic subunit-like
            [Glycine max]
          Length = 460

 Score =  488 bits (1255), Expect = e-135
 Identities = 241/319 (75%), Positives = 281/319 (88%), Gaps = 4/319 (1%)
 Frame = -1

Query: 968  EDTSSEEVCIVLAGVIARFDGSDIQSMLRRWFQETHTQFWDQMXXXXXXXXXXXXXGRLP 789
            +DTSSEE C++++GVIARFDGSDIQ+ML++WF+E +++F DQ               ++P
Sbjct: 140  QDTSSEEFCLIMSGVIARFDGSDIQNMLQKWFEEANSRFSDQNPKSQDSEDFENTDVKIP 199

Query: 788  YQLWNVSKYGSCADAAITGIMPPPLMELQ-SSQRYYCAVTVGNDAVISAFRLSEDRKRSL 612
            YQLWN+ KYG+CADAAITGIMPPPLME Q S+QRYYCAV VG DAVISA+RLSE++ RSL
Sbjct: 200  YQLWNIGKYGTCADAAITGIMPPPLMEQQQSNQRYYCAVAVGEDAVISAYRLSENKGRSL 259

Query: 611  VGAILSKVVPATFSTIASFSKMFWRSEQNSVKKPEPKPQPFARASPLTCLKDHPRKGEKL 432
            VGAILSKVVPATFSTI+SFSK+ WR+E++S KK + KP+PFARASPLTCLKDHPRKGEKL
Sbjct: 260  VGAILSKVVPATFSTISSFSKLIWRNERSSPKKSDLKPRPFARASPLTCLKDHPRKGEKL 319

Query: 431  TLSPSGTLAAITDSLGRILLLDTQALVVVRLWKGYRDASCLFVEMLVNRDTA-ASSSYHE 255
            TLSPSGTLAAITDSLGRILLLDTQALVVVRLWKGYRDASCLF+EMLVN+D A +SSSY E
Sbjct: 320  TLSPSGTLAAITDSLGRILLLDTQALVVVRLWKGYRDASCLFMEMLVNKDIASSSSSYSE 379

Query: 254  YVKSDYCLCLAIHAPRKGIVEVWQMRTGPRIRTVQCTKGSKILQPTYRFGS--SSSYVPL 81
             +KSDYCLCLAIHAPRKGI+E+WQMRTG R+RT+ CTKGSK+LQP+YRFG+  SS YVPL
Sbjct: 380  PLKSDYCLCLAIHAPRKGIIEIWQMRTGQRLRTISCTKGSKMLQPSYRFGASVSSPYVPL 439

Query: 80   EVFFLNGDSGQLSVLNRSL 24
            EVF LNGDSGQ+SVLNR+L
Sbjct: 440  EVFLLNGDSGQISVLNRTL 458


>ref|XP_002331804.1| predicted protein [Populus trichocarpa] gi|222874500|gb|EEF11631.1|
           predicted protein [Populus trichocarpa]
          Length = 354

 Score =  486 bits (1250), Expect = e-135
 Identities = 243/315 (77%), Positives = 273/315 (86%), Gaps = 3/315 (0%)
 Frame = -1

Query: 959 SSEEVCIVLAGVIARFDGSDIQSMLRRWFQETHTQFWDQMXXXXXXXXXXXXXGRLPYQL 780
           SSEEV +V+ GVIARFDG+DI+++L+ WFQET++ FWD+               RLP+QL
Sbjct: 39  SSEEVSVVIPGVIARFDGADIRNILQEWFQETNSHFWDEKSKRRDYEELGNGFKRLPHQL 98

Query: 779 WNVSKYGSCADAAITGIMPPPLMELQSSQRYYCAVTVGNDAVISAFRLSEDRKRSLVGAI 600
           W+V K+G CADAAITGIMPPPLME+QSSQRYY AVT+G DAVISA+RLSEDR RSLVGAI
Sbjct: 99  WSVDKFGLCADAAITGIMPPPLMEIQSSQRYYRAVTIGEDAVISAYRLSEDRSRSLVGAI 158

Query: 599 LSKVVPATFSTIASFSKMFWRSEQNSVKKPEPKPQPFARASPLTCLKDHPRKGEKLTLSP 420
           LSKV+PA FSTI+S SKM WRSE+   KKPE KPQ FA+ASPLTCLKDHPRKGEKLTLSP
Sbjct: 159 LSKVMPAAFSTISSVSKMIWRSERTPTKKPEVKPQSFAKASPLTCLKDHPRKGEKLTLSP 218

Query: 419 SGTLAAITDSLGRILLLDTQALVVVRLWKGYRDASCLFVEMLVNRDTA-ASSSYHEYVKS 243
           SGTLAAITDSLGRILLLDTQALVVVRLWKGYRDA+CLF+EMLV+ ++A ASSS+HE  KS
Sbjct: 219 SGTLAAITDSLGRILLLDTQALVVVRLWKGYRDANCLFMEMLVSMNSAGASSSHHEPSKS 278

Query: 242 DYCLCLAIHAPRKGIVEVWQMRTGPRIRTVQCTKGSKILQPTYRFGSS--SSYVPLEVFF 69
           DYCLCLAIHAPRKGI+EVWQMRTGPR+ T+QC KGSK+LQPTYRFGSS  S YVPLEVF 
Sbjct: 279 DYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCAKGSKLLQPTYRFGSSLDSPYVPLEVFL 338

Query: 68  LNGDSGQLSVLNRSL 24
           LNGDSGQLSVLNRSL
Sbjct: 339 LNGDSGQLSVLNRSL 353


>ref|XP_002524520.1| rab3 gtpase-activating protein non-catalytic subunit, putative
            [Ricinus communis] gi|223536194|gb|EEF37847.1| rab3
            gtpase-activating protein non-catalytic subunit, putative
            [Ricinus communis]
          Length = 484

 Score =  481 bits (1238), Expect = e-133
 Identities = 239/311 (76%), Positives = 268/311 (86%), Gaps = 3/311 (0%)
 Frame = -1

Query: 968  EDTSSEEVCIVLAGVIARFDGSDIQSMLRRWFQETHTQFWDQMXXXXXXXXXXXXXGRLP 789
            + +SSEE+ IV+ GVIARFDGSD+Q+ML+ W QE H+QFWD+               RLP
Sbjct: 136  QTSSSEEISIVMPGVIARFDGSDLQNMLQEWIQEKHSQFWDEKPNRDADGLGITYK-RLP 194

Query: 788  YQLWNVSKYGSCADAAITGIMPPPLMELQSSQRYYCAVTVGNDAVISAFRLSEDRKRSLV 609
            YQLWNV+KYGSCADAAITG+MPPPLME+QSSQRYYCAVT+G+DAVISA+RLSEDR +SLV
Sbjct: 195  YQLWNVNKYGSCADAAITGVMPPPLMEVQSSQRYYCAVTIGDDAVISAYRLSEDRSKSLV 254

Query: 608  GAILSKVVPATFSTIASFSKMFWRSEQNSVKKPEPKPQPFARASPLTCLKDHPRKGEKLT 429
            GAILSKVVPATFSTIAS SKM WRSE+ S KK E KPQ FA+ASPLTCLKDHPRKGEKLT
Sbjct: 255  GAILSKVVPATFSTIASLSKMIWRSEKASPKKSEAKPQSFAKASPLTCLKDHPRKGEKLT 314

Query: 428  LSPSGTLAAITDSLGRILLLDTQALVVVRLWKGYRDASCLFVEMLVNRDTA-ASSSYHEY 252
            LSP GTLAAITDSLGRILLLDTQAL+VVRLWKGYRDASC F+EM V RD A ASSSY+E 
Sbjct: 315  LSPGGTLAAITDSLGRILLLDTQALIVVRLWKGYRDASCFFMEMQVKRDNAGASSSYYEP 374

Query: 251  VKSDYCLCLAIHAPRKGIVEVWQMRTGPRIRTVQCTKGSKILQPTYRFGSS--SSYVPLE 78
             KSDYCLCLAIHAPRKGI+EVWQMRTGPR+ T+QC +G+K+LQPTYRFGSS  S Y+PLE
Sbjct: 375  SKSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCARGTKLLQPTYRFGSSPDSPYIPLE 434

Query: 77   VFFLNGDSGQL 45
            VF LNG+SGQL
Sbjct: 435  VFVLNGESGQL 445


Top