BLASTX nr result

ID: Panax21_contig00021246 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00021246
         (1739 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...   139   2e-30
ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...   139   2e-30
ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|2...   136   2e-29
ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|2...   136   2e-29
gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana]              109   3e-21

>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
            predicted protein [Populus trichocarpa]
          Length = 1386

 Score =  139 bits (351), Expect = 2e-30
 Identities = 82/253 (32%), Positives = 119/253 (47%), Gaps = 1/253 (0%)
 Frame = -1

Query: 1739 IGNGACTSLWFDPWLGHSPLAPSIHSPLIINSGLGLAASVSQIIINSSWVLPASNHNDLI 1560
            IG+G  TSLWFD W  HSPLA S     I +SG+   A V+ +I NS W  P +      
Sbjct: 1108 IGDGMTTSLWFDNWHPHSPLADSYGERFIYDSGMAKNAKVNVLIQNSEWKTPTTQAIGWH 1167

Query: 1559 KF*NSFDMYRICNSDAQDVILWDGTKAKDIKTSTFWCSIRKVGLTVGWHNMGWHSMVPPR 1380
                +           +D I+W  +          W  +R+    V WH++ W     PR
Sbjct: 1168 PIIEAIPSNSNPKMGQKDEIVWLDSPNHRFLVKVAWEHLRRHRQMVEWHDIVWFKNAVPR 1227

Query: 1379 YSFLLWLAFHKGLRTIDRLLMFGMEMNPLCVLCSTERKTFHHLFFQCRFSFQLLVTTLRR 1200
            +SFLLW+A  + L T D+L  FG+     C LC    +  +HLFF+C ++  +      R
Sbjct: 1228 HSFLLWMAVQQKLTTQDKLYRFGIHGPNRCSLCLRNNEDHNHLFFECSYTKAIWWDVCDR 1287

Query: 1199 CGWRGMTRSWSSKTDFLCCS-SGPNFKHGLLLFGFATVVYRIWQERNSRIFSNKATPVRV 1023
            C    MT+ W     +   S  G +F +      FA  VY +WQERN+RIF+  +    +
Sbjct: 1288 CDIPRMTKGWDEWIRWATVSWHGKSFVNFSRKLSFAATVYHVWQERNARIFAGMSRTPNL 1347

Query: 1022 ILRDILHIIKCRL 984
            +L  I  II+ +L
Sbjct: 1348 VLNQIECIIRDKL 1360


>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
            predicted protein [Populus trichocarpa]
          Length = 517

 Score =  139 bits (351), Expect = 2e-30
 Identities = 81/253 (32%), Positives = 119/253 (47%), Gaps = 1/253 (0%)
 Frame = -1

Query: 1739 IGNGACTSLWFDPWLGHSPLAPSIHSPLIINSGLGLAASVSQIIINSSWVLPASNHNDLI 1560
            IG+G  TSLWFD W  HSPLA S     I +SG+   A V+ +I NS W  P +      
Sbjct: 235  IGDGMTTSLWFDNWHPHSPLADSYGERFIYDSGMAKNAKVNVLIQNSEWKTPTTQAIGWH 294

Query: 1559 KF*NSFDMYRICNSDAQDVILWDGTKAKDIKTSTFWCSIRKVGLTVGWHNMGWHSMVPPR 1380
                +           +D ++W  +          W  +R+    V WH++ W     PR
Sbjct: 295  PIIEAIPSNSNPKMGQKDELVWLDSPNHRFSVKVAWEQLRRHRQMVEWHDIVWFKNAVPR 354

Query: 1379 YSFLLWLAFHKGLRTIDRLLMFGMEMNPLCVLCSTERKTFHHLFFQCRFSFQLLVTTLRR 1200
            +SFLLW+A  + L T D+L  FG+     C LC    +  +HLFF+C ++  +      R
Sbjct: 355  HSFLLWMAVQQKLTTQDKLHRFGIHGPNRCSLCLRNNEDHNHLFFECSYTKAIWWDVCDR 414

Query: 1199 CGWRGMTRSWSSKTDFLCCS-SGPNFKHGLLLFGFATVVYRIWQERNSRIFSNKATPVRV 1023
            C    MT+ W     +   S  G +F +      FA  VY +WQERN+RIF+  +    +
Sbjct: 415  CDIPRMTKGWDEWIRWATVSWHGKSFVNFSCKLSFAATVYHVWQERNARIFAGMSRTPNL 474

Query: 1022 ILRDILHIIKCRL 984
            +L  I  II+ +L
Sbjct: 475  VLNQIECIIRDKL 487


>ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|222870351|gb|EEF07482.1|
            predicted protein [Populus trichocarpa]
          Length = 1046

 Score =  136 bits (343), Expect = 2e-29
 Identities = 80/253 (31%), Positives = 117/253 (46%), Gaps = 1/253 (0%)
 Frame = -1

Query: 1739 IGNGACTSLWFDPWLGHSPLAPSIHSPLIINSGLGLAASVSQIIINSSWVLPASNHNDLI 1560
            IG+G  TSLWFD W  HSPLA S     I +SG+   A V+ +I NS W  P +      
Sbjct: 768  IGDGMTTSLWFDNWHPHSPLADSYGERFIYDSGMAKNAKVNVLIQNSEWKTPTTQAIGWH 827

Query: 1559 KF*NSFDMYRICNSDAQDVILWDGTKAKDIKTSTFWCSIRKVGLTVGWHNMGWHSMVPPR 1380
                +           +D I+W  +          W  +R+    V WH++ W     PR
Sbjct: 828  PIIEAIPSNSNPKMGQKDEIIWLDSPNHRFSVKVAWEQLRRHRQLVEWHDIVWFKNAVPR 887

Query: 1379 YSFLLWLAFHKGLRTIDRLLMFGMEMNPLCVLCSTERKTFHHLFFQCRFSFQLLVTTLRR 1200
            +SFLLW+   + L T D+L  FG+     C LC    +  +HLFF+C ++  +      R
Sbjct: 888  HSFLLWMVVQQKLTTQDKLHRFGIHGPNRCSLCLRNNEDHNHLFFECSYTKAIWWDVCDR 947

Query: 1199 CGWRGMTRSWSSKTDFLCCS-SGPNFKHGLLLFGFATVVYRIWQERNSRIFSNKATPVRV 1023
            C    MT+ W     +   S  G +F +      FA  VY +WQERN+RIF+  +    +
Sbjct: 948  CDIPRMTKGWDEWIRWATVSWHGKSFINFSRKLSFAATVYHVWQERNARIFAGLSRTSNL 1007

Query: 1022 ILRDILHIIKCRL 984
            +   I  II+ +L
Sbjct: 1008 VFNQIECIIRDKL 1020


>ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|222849970|gb|EEE87517.1|
            predicted protein [Populus trichocarpa]
          Length = 331

 Score =  136 bits (342), Expect = 2e-29
 Identities = 80/253 (31%), Positives = 117/253 (46%), Gaps = 1/253 (0%)
 Frame = -1

Query: 1739 IGNGACTSLWFDPWLGHSPLAPSIHSPLIINSGLGLAASVSQIIINSSWVLPASNHNDLI 1560
            IG+G  TSLWFD W  HSPLA S     I +SG+   A V+ +I NS W  P +      
Sbjct: 53   IGDGMTTSLWFDNWHPHSPLADSYGERFIYDSGMAKNAKVNVLIQNSEWKTPTTQAIGWH 112

Query: 1559 KF*NSFDMYRICNSDAQDVILWDGTKAKDIKTSTFWCSIRKVGLTVGWHNMGWHSMVPPR 1380
                +           +D I+W  +          W  +R+    V WH++ W     PR
Sbjct: 113  PIIEAIPSNSNPKMGQKDEIVWLDSPNHRFSVKVAWEQLRRHRHMVEWHDIVWFKNAVPR 172

Query: 1379 YSFLLWLAFHKGLRTIDRLLMFGMEMNPLCVLCSTERKTFHHLFFQCRFSFQLLVTTLRR 1200
            +SFLLW+   + L T D+L  FG+     C LC    +  +HLFF+C ++  +      R
Sbjct: 173  HSFLLWMVVQQKLTTQDKLHRFGIHGPNRCSLCLRNNEDHNHLFFECSYTKAIWWDVCDR 232

Query: 1199 CGWRGMTRSWSSKTDFLCCS-SGPNFKHGLLLFGFATVVYRIWQERNSRIFSNKATPVRV 1023
            C    MT+ W     +   S  G +F +      FA  VY +WQERN+RIF+  +    +
Sbjct: 233  CDIPRMTKGWDEWIRWATVSWHGKSFVNFSRKLSFAATVYHVWQERNARIFAGLSRTSNL 292

Query: 1022 ILRDILHIIKCRL 984
            +   I  II+ +L
Sbjct: 293  VFNQIECIIRDKL 305


>gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana]
          Length = 1161

 Score =  109 bits (272), Expect = 3e-21
 Identities = 79/290 (27%), Positives = 123/290 (42%), Gaps = 26/290 (8%)
 Frame = -1

Query: 1739 IGNGACTSLWFDPWLGHSPLAPSIHSPLIINSGLGLAASVSQIIINSSWVLPAS-NHNDL 1563
            +G+G   S W D W  H PL         + +GL L + V   + + +W + +S + N +
Sbjct: 873  VGSGVTASFWHDNWTDHGPLLHLTGPAGPLLAGLPLNSVVRDALRDDTWRISSSRSRNPV 932

Query: 1562 IKF*NSFDMYRICNSDAQ-------DVILWD---GTKAKDIKTSTFWCSIRKVGLTVGWH 1413
            I       + R+  S A        D  LW       +    T+  W  ++    +V WH
Sbjct: 933  ITL-----LQRVLPSAASLIDCPHDDTYLWKIGHHAPSNRFSTADTWSYLQPSSTSVLWH 987

Query: 1412 NMGWHSMVPPRYSFLLWLAFHKGLRTIDRLLMFGMEMNPLCVLCSTERKTFHHLFFQCRF 1233
               W     P+ +F+ W+  H  L T DRL  +G  + P CVLC+   ++  HLFF+C+F
Sbjct: 988  KAVWFKDHVPKQAFICWVVAHNRLHTRDRLRRWGFSIPPTCVLCNDLDESREHLFFRCQF 1047

Query: 1232 SFQLLVTTLRRCGWRGMTRSWSSKTDFLCCSSGPNFKHGLL---------------LFGF 1098
            S ++                WS     L  +  P F H LL                  F
Sbjct: 1048 SSEI----------------WSFFMRALNLNPPPQFMHCLLWTLTASRDRNITLITKLLF 1091

Query: 1097 ATVVYRIWQERNSRIFSNKATPVRVILRDILHIIKCRLHTYARFQKLESK 948
               VY IW+ERN RI SN   P  +I+++I  I++ RL   +R  ++ S+
Sbjct: 1092 HASVYFIWRERNLRIHSNSVRPAHLIIKEIQLIVRARLDPLSRSSRVVSQ 1141


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