BLASTX nr result

ID: Panax21_contig00021236 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00021236
         (547 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFN88198.1| retropepsin-like protein [Phaseolus vulgaris]          189   2e-46
ref|XP_004173142.1| PREDICTED: uncharacterized protein LOC101232...   146   2e-33
gb|AAD20430.1| putative Athila retroelement ORF1 protein [Arabid...   108   4e-22
gb|AAF79809.1|AC020646_32 T32E20.9 [Arabidopsis thaliana]             108   7e-22
pir||S66306 hypothetical protein 1 - Arabidopsis thaliana retrot...   107   1e-21

>gb|AFN88198.1| retropepsin-like protein [Phaseolus vulgaris]
          Length = 725

 Score =  189 bits (481), Expect = 2e-46
 Identities = 90/149 (60%), Positives = 112/149 (75%)
 Frame = +3

Query: 99  LCITFPNLDANTHFELKSGLIHLLPTFHCLAGEDPHKHLKEFHVACTSMKPIGVTKEQIK 278
           +CI +P+       ELKSGLIHLLP FH LAGEDPHKHLK+FH  CT+M+P GVT++ IK
Sbjct: 1   MCIQYPDGQC----ELKSGLIHLLPKFHGLAGEDPHKHLKKFHTMCTTMRPAGVTEKHIK 56

Query: 279 LRAFPFSXXXXXXXXXXXXPYGSITKSEEMKRLFLEKYFPASRAANIRKEICGVRQNNGE 458
           L+AFP S            P GS+T  E +KR+FLEK+FPASRA +IRKEICG+RQ + E
Sbjct: 57  LKAFPSSLQDAAKDWLYYLPAGSVTNWERLKRVFLEKFFPASRATSIRKEICGIRQQDRE 116

Query: 459 TLHEYWERFKKLCASCPHH*ISDQLLIQY 545
           +L+EYWE FK+LC SCP+H I++QLLIQY
Sbjct: 117 SLYEYWEIFKRLCTSCPYHQINEQLLIQY 145


>ref|XP_004173142.1| PREDICTED: uncharacterized protein LOC101232801 [Cucumis sativus]
          Length = 573

 Score =  146 bits (369), Expect = 2e-33
 Identities = 75/167 (44%), Positives = 107/167 (64%)
 Frame = +3

Query: 45  AETRTLKELAAPTLNQQPLCITFPNLDANTHFELKSGLIHLLPTFHCLAGEDPHKHLKEF 224
           A  +TL++L  P ++Q+P+ I  P     T+F L+S LI  LP F    GEDPHKHL++F
Sbjct: 66  APEKTLRKLYEPDIHQRPIGIVIP--PTTTNFHLRSVLISNLPIFRGSNGEDPHKHLRDF 123

Query: 225 HVACTSMKPIGVTKEQIKLRAFPFSXXXXXXXXXXXXPYGSITKSEEMKRLFLEKYFPAS 404
             AC  ++P GVT+EQ+ LRAF FS               +IT  E++K+ FLEK+FP +
Sbjct: 124 SWACDLLRPHGVTEEQLNLRAFSFSLADSAKRWLINLESQTITTWEQLKKRFLEKFFPIT 183

Query: 405 RAANIRKEICGVRQNNGETLHEYWERFKKLCASCPHH*ISDQLLIQY 545
           RA  + KEI G RQ+N ETL EYWER+ +LCA  P++ +S++ ++QY
Sbjct: 184 RAQTVLKEIYGARQSNNETLFEYWERYIELCARLPYNQLSERDIVQY 230


>gb|AAD20430.1| putative Athila retroelement ORF1 protein [Arabidopsis thaliana]
          Length = 622

 Score =  108 bits (271), Expect = 4e-22
 Identities = 55/140 (39%), Positives = 82/140 (58%), Gaps = 2/140 (1%)
 Frame = +3

Query: 129 NTHFELKSGLIHLLPT--FHCLAGEDPHKHLKEFHVACTSMKPIGVTKEQIKLRAFPFSX 302
           N +FE+KS LI+++ T  FH L+ EDP  HL++F + C+++K  G++++  KLR FPFS 
Sbjct: 54  NNNFEIKSSLINMVQTSKFHGLSMEDPLDHLEQFDMLCSTVKINGISEDAFKLRLFPFSL 113

Query: 303 XXXXXXXXXXXPYGSITKSEEMKRLFLEKYFPASRAANIRKEICGVRQNNGETLHEYWER 482
                      P  SIT  ++ KR FL K+F  +R A +R EI    Q + E+  E WER
Sbjct: 114 GDRARIWEKNLPQRSITSWDQCKRAFLSKFFSTTRTARLRNEISSFTQRSNESFCEAWER 173

Query: 483 FKKLCASCPHH*ISDQLLIQ 542
           FK     CPHH  S + +++
Sbjct: 174 FKGYKMQCPHHGFSKESILK 193


>gb|AAF79809.1|AC020646_32 T32E20.9 [Arabidopsis thaliana]
          Length = 1586

 Score =  108 bits (269), Expect = 7e-22
 Identities = 58/131 (44%), Positives = 73/131 (55%), Gaps = 2/131 (1%)
 Frame = +3

Query: 129 NTHFELKSGLIHLLPT--FHCLAGEDPHKHLKEFHVACTSMKPIGVTKEQIKLRAFPFSX 302
           N +FE+KSGLI ++ +  FH L  EDP  HL EF   C+  K   V+++  KLR FPFS 
Sbjct: 68  NNNFEIKSGLIAMVQSNKFHGLPMEDPLDHLDEFDRLCSLTKINRVSEDGFKLRLFPFSL 127

Query: 303 XXXXXXXXXXXPYGSITKSEEMKRLFLEKYFPASRAANIRKEICGVRQNNGETLHEYWER 482
                      P GSIT   + K+ FL K+F  SR A +R +I G  Q N ET +E WER
Sbjct: 128 GDKAHQWEKSLPQGSITSWNDCKKAFLAKFFSNSRTARLRNDISGFTQTNNETFYEAWER 187

Query: 483 FKKLCASCPHH 515
           FK     CPHH
Sbjct: 188 FKGYQTQCPHH 198


>pir||S66306 hypothetical protein 1 - Arabidopsis thaliana retrotransposon
           Athila gi|806535|emb|CAA57397.1| unnamed protein product
           [Arabidopsis thaliana]
          Length = 935

 Score =  107 bits (267), Expect = 1e-21
 Identities = 59/139 (42%), Positives = 75/139 (53%), Gaps = 2/139 (1%)
 Frame = +3

Query: 129 NTHFELKSGLIHLLP--TFHCLAGEDPHKHLKEFHVACTSMKPIGVTKEQIKLRAFPFSX 302
           N +FE+KSGLI ++    FH L  EDP  HL EF   C   K  GV+++  KLR FPFS 
Sbjct: 68  NNNFEIKSGLIAMVQGNKFHGLLMEDPLDHLDEFERLCRLTKINGVSEDGFKLRLFPFSL 127

Query: 303 XXXXXXXXXXXPYGSITKSEEMKRLFLEKYFPASRAANIRKEICGVRQNNGETLHEYWER 482
                      P+GSIT  ++ K+ FL K+F  SR A +R EI G  Q   E+  E WER
Sbjct: 128 GDKAHLWEKTLPHGSITTWDDCKKAFLAKFFSNSRTARLRNEISGFTQKQNESFCEAWER 187

Query: 483 FKKLCASCPHH*ISDQLLI 539
           FK     CPHH   +  L+
Sbjct: 188 FKGYPTKCPHHGFKEASLL 206


Top