BLASTX nr result

ID: Panax21_contig00021232 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00021232
         (603 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004170243.1| PREDICTED: mechanosensitive ion channel prot...   228   5e-58
ref|XP_004140046.1| PREDICTED: mechanosensitive ion channel prot...   228   5e-58
gb|AAG51988.1|AC024260_26 unknown protein, 5' partial; 111936-11...   228   6e-58
ref|NP_175752.1| mechanosensitive channel of small conductance-l...   228   6e-58
ref|NP_001189895.1| mechanosensitive channel of small conductanc...   226   2e-57

>ref|XP_004170243.1| PREDICTED: mechanosensitive ion channel protein 8-like [Cucumis
            sativus]
          Length = 923

 Score =  228 bits (582), Expect = 5e-58
 Identities = 104/161 (64%), Positives = 138/161 (85%)
 Frame = +3

Query: 3    DRCEIDGVQMTVEEMNILTTVFLRFDNQKIIYPNGTLSTIRIHNYYRSPDMDDAIDFWVH 182
            DRCEIDGVQM VEEMNILTT+FLR+DNQKII+PN  L+T  IHN+YRSPDM D I+F +H
Sbjct: 758  DRCEIDGVQMIVEEMNILTTIFLRYDNQKIIFPNSVLATKAIHNFYRSPDMGDGIEFCLH 817

Query: 183  IATPTKKINLMKQLIISYIENKKDHWYANPQIVMRNMDDLTRIQMSIWPTHKMNHQNMVE 362
            I+TP +KI +M+Q IISYIE KK+HW   P IV++++++L R++++IW TH+MNHQ+M E
Sbjct: 818  ISTPPEKIAIMRQRIISYIEGKKEHWCPAPMIVLKDVEELNRMRIAIWLTHRMNHQDMGE 877

Query: 363  RYNRRALLVEEIVKIVKELDMEYRLYPLNINIQTMPTVNST 485
            R+ RRALLVEE+VKI +ELD++YRL PL+IN++++P VNST
Sbjct: 878  RWTRRALLVEELVKIFQELDLQYRLLPLDINVRSLPPVNST 918


>ref|XP_004140046.1| PREDICTED: mechanosensitive ion channel protein 8-like [Cucumis
            sativus]
          Length = 923

 Score =  228 bits (582), Expect = 5e-58
 Identities = 104/161 (64%), Positives = 138/161 (85%)
 Frame = +3

Query: 3    DRCEIDGVQMTVEEMNILTTVFLRFDNQKIIYPNGTLSTIRIHNYYRSPDMDDAIDFWVH 182
            DRCEIDGVQM VEEMNILTT+FLR+DNQKII+PN  L+T  IHN+YRSPDM D I+F +H
Sbjct: 758  DRCEIDGVQMIVEEMNILTTIFLRYDNQKIIFPNSVLATKAIHNFYRSPDMGDGIEFCLH 817

Query: 183  IATPTKKINLMKQLIISYIENKKDHWYANPQIVMRNMDDLTRIQMSIWPTHKMNHQNMVE 362
            I+TP +KI +M+Q IISYIE KK+HW   P IV++++++L R++++IW TH+MNHQ+M E
Sbjct: 818  ISTPPEKIAIMRQRIISYIEGKKEHWCPAPMIVLKDVEELNRMRIAIWLTHRMNHQDMGE 877

Query: 363  RYNRRALLVEEIVKIVKELDMEYRLYPLNINIQTMPTVNST 485
            R+ RRALLVEE+VKI +ELD++YRL PL+IN++++P VNST
Sbjct: 878  RWTRRALLVEELVKIFQELDLQYRLLPLDINVRSLPPVNST 918


>gb|AAG51988.1|AC024260_26 unknown protein, 5' partial; 111936-110607 [Arabidopsis thaliana]
          Length = 327

 Score =  228 bits (581), Expect = 6e-58
 Identities = 104/156 (66%), Positives = 130/156 (83%)
 Frame = +3

Query: 3   DRCEIDGVQMTVEEMNILTTVFLRFDNQKIIYPNGTLSTIRIHNYYRSPDMDDAIDFWVH 182
           DRCEIDGVQM VEEMNILTTVFLRFDNQKI+YPN  L T  I NYYRSPDM DAI+F+VH
Sbjct: 152 DRCEIDGVQMIVEEMNILTTVFLRFDNQKIVYPNSLLGTKPIANYYRSPDMQDAIEFFVH 211

Query: 183 IATPTKKINLMKQLIISYIENKKDHWYANPQIVMRNMDDLTRIQMSIWPTHKMNHQNMVE 362
           IATP +K   ++Q I+SY++NKKDHW+ +P IV R+M  L  +++++WPTHKMNHQNM E
Sbjct: 212 IATPPEKTTALRQRILSYVDNKKDHWHPSPMIVFRDMCGLNSVKIAMWPTHKMNHQNMGE 271

Query: 363 RYNRRALLVEEIVKIVKELDMEYRLYPLNINIQTMP 470
           RY RR  L+EEI ++ +ELD+EYRLYPLNIN++++P
Sbjct: 272 RYVRRGQLLEEIGRLCRELDIEYRLYPLNINVKSLP 307


>ref|NP_175752.1| mechanosensitive channel of small conductance-like 4 [Arabidopsis
            thaliana] gi|75176759|sp|Q9LPG3.1|MSL4_ARATH RecName:
            Full=Mechanosensitive ion channel protein 4; AltName:
            Full=Mechanosensitive channel of small conductance-like
            4; AltName: Full=MscS-Like protein 4
            gi|8671879|gb|AAF78442.1|AC018748_21 Contains similarity
            to a putative protein T30F21.6 gi|4836872 from
            Arabidopsis thaliana BAC T30F21 gb|AC007260 and contains
            an uncharacterized protein PF|00924 family [Arabidopsis
            thaliana] gi|332194824|gb|AEE32945.1| mechanosensitive
            channel of small conductance-like 4 [Arabidopsis
            thaliana]
          Length = 881

 Score =  228 bits (581), Expect = 6e-58
 Identities = 104/156 (66%), Positives = 130/156 (83%)
 Frame = +3

Query: 3    DRCEIDGVQMTVEEMNILTTVFLRFDNQKIIYPNGTLSTIRIHNYYRSPDMDDAIDFWVH 182
            DRCEIDGVQM VEEMNILTTVFLRFDNQKI+YPN  L T  I NYYRSPDM DAI+F+VH
Sbjct: 706  DRCEIDGVQMIVEEMNILTTVFLRFDNQKIVYPNSLLGTKPIANYYRSPDMQDAIEFFVH 765

Query: 183  IATPTKKINLMKQLIISYIENKKDHWYANPQIVMRNMDDLTRIQMSIWPTHKMNHQNMVE 362
            IATP +K   ++Q I+SY++NKKDHW+ +P IV R+M  L  +++++WPTHKMNHQNM E
Sbjct: 766  IATPPEKTTALRQRILSYVDNKKDHWHPSPMIVFRDMCGLNSVKIAMWPTHKMNHQNMGE 825

Query: 363  RYNRRALLVEEIVKIVKELDMEYRLYPLNINIQTMP 470
            RY RR  L+EEI ++ +ELD+EYRLYPLNIN++++P
Sbjct: 826  RYVRRGQLLEEIGRLCRELDIEYRLYPLNINVKSLP 861


>ref|NP_001189895.1| mechanosensitive channel of small conductance-like 5 [Arabidopsis
            thaliana] gi|332642048|gb|AEE75569.1| mechanosensitive
            channel of small conductance-like 5 [Arabidopsis
            thaliana]
          Length = 846

 Score =  226 bits (577), Expect = 2e-57
 Identities = 106/162 (65%), Positives = 132/162 (81%), Gaps = 1/162 (0%)
 Frame = +3

Query: 3    DRCEIDGVQMTVEEMNILTTVFLRFDNQKIIYPNGTLSTIRIHNYYRSPDMDDAIDFWVH 182
            DRCEIDGVQ+ VEEMNILTTVFLR+DNQKIIYPN  L T  I NYYRSPDM DA++F VH
Sbjct: 670  DRCEIDGVQLVVEEMNILTTVFLRYDNQKIIYPNSVLGTKPIANYYRSPDMGDAVEFCVH 729

Query: 183  IATPTKKINLMKQLIISYIENKKDHWYANPQIVMRNMDDLTRIQMSIWPTHKMNHQNMVE 362
            IATP +KI  +KQ I+SY++NKKD+WY  P IV  +MDDL  +++++W TH+MNHQ+M E
Sbjct: 730  IATPPEKITAIKQRILSYVDNKKDYWYPAPMIVFLSMDDLNSVKIAVWLTHRMNHQDMGE 789

Query: 363  RYNRRALLVEEIVKIVKELDMEYRLYPLNINIQTM-PTVNST 485
            RY RR LL+EE+ K  +ELD+EYRLYPLNIN++++ PT N T
Sbjct: 790  RYIRRGLLLEEVGKTCRELDIEYRLYPLNINVRSLPPTANPT 831


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