BLASTX nr result

ID: Panax21_contig00021228 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00021228
         (1002 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81739.1| hypothetical protein VITISV_009673 [Vitis vinifera]    53   2e-14
gb|ABD63142.1| Retrotransposon gag protein [Asparagus officinalis]     59   1e-12
emb|CAN82739.1| hypothetical protein VITISV_015052 [Vitis vinifera]    53   6e-11
emb|CAN65719.1| hypothetical protein VITISV_020846 [Vitis vinifera]    53   2e-10
ref|XP_003631849.1| PREDICTED: uncharacterized protein LOC100259...    53   2e-10

>emb|CAN81739.1| hypothetical protein VITISV_009673 [Vitis vinifera]
          Length = 2377

 Score = 53.1 bits (126), Expect(3) = 2e-14
 Identities = 31/59 (52%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
 Frame = +1

Query: 391  VVDNDNLPCLDNEIISPISDNACVNP--VVPKHLGITVIQNDENILVPLGNEYGWQVWI 561
            VV N+ L  LD  II PISD++ V+P  VVPK  GITV++NDE  L+P     GW+V I
Sbjct: 896  VVRNEVLKLLDAGIIYPISDSSWVSPTQVVPKKSGITVMKNDEGELIPTRLTTGWRVCI 954



 Score = 39.7 bits (91), Expect(3) = 2e-14
 Identities = 22/66 (33%), Positives = 32/66 (48%)
 Frame = +2

Query: 578  NFLKRNYHFSLSFLDSILKESVGYAHNCSSVANSNYFQLPRPPENHTKSTLGCLFVSLII 757
            N + +  HF L FLD +L+   G+ + C     S YFQ+    E+  K+T  C F     
Sbjct: 960  NAVTKKDHFPLPFLDQVLERVAGHDYYCFLDGYSGYFQIAIALEDQEKTTFTCPF-GTYA 1018

Query: 758  YSRIVF 775
            Y R+ F
Sbjct: 1019 YRRMXF 1024



 Score = 32.7 bits (73), Expect(3) = 2e-14
 Identities = 35/139 (25%), Positives = 60/139 (43%), Gaps = 17/139 (12%)
 Frame = +2

Query: 2    GNMTIDLNVFNVGEQPSDLFD-QSVEVNMIQKM--SGNELTREDEIINF--------CLN 148
            GNMT+++NVFN+ +QP D  D ++ E  +I+ +     E   E+ I  F        C+ 
Sbjct: 733  GNMTVEMNVFNLCKQPMDHDDVENEEACLIEALVQEHTEKLMEENIDEFFSTIVKEECV- 791

Query: 149  HFGQNWDETEYLNEVNEMLDSTTQK------SYSRLEPIIESSLTHFEHF*ENQIDLKSS 310
                 W E   +  +N + +    K      S   L+P+  ++LT      E ++ L   
Sbjct: 792  QVATEWKEKYTIQSLNSVENDEESKXEEVEISKPELKPLPHATLTE-----EQEMKLLKV 846

Query: 311  YDHFKSTLGPSEAPSKILN 367
                K  +G S +  K +N
Sbjct: 847  LKENKRAIGWSISDLKGIN 865


>gb|ABD63142.1| Retrotransposon gag protein [Asparagus officinalis]
          Length = 1788

 Score = 58.5 bits (140), Expect(2) = 1e-12
 Identities = 32/60 (53%), Positives = 41/60 (68%), Gaps = 2/60 (3%)
 Frame = +1

Query: 388  KVVDNDNLPCLDNEIISPISDNACVNPV--VPKHLGITVIQNDENILVPLGNEYGWQVWI 561
            + V  D L CLD+ II PISD++ V+PV  VPK  GITVIQN+ N L+P   + GW+V I
Sbjct: 847  EAVRKDILKCLDHGIIYPISDSSWVSPVQVVPKKSGITVIQNEANELIPTRIQTGWRVCI 906



 Score = 40.8 bits (94), Expect(2) = 1e-12
 Identities = 22/66 (33%), Positives = 31/66 (46%)
 Frame = +2

Query: 578  NFLKRNYHFSLSFLDSILKESVGYAHNCSSVANSNYFQLPRPPENHTKSTLGCLFVSLII 757
            N   R  HF L F+D +L+   G+   C     S Y Q+P  PE+  K+T  C +     
Sbjct: 912  NLATRKDHFPLPFIDQMLERLAGHEFYCFLDGYSGYNQIPIAPEDQEKTTFTCPY-GTFA 970

Query: 758  YSRIVF 775
            Y R+ F
Sbjct: 971  YRRMPF 976


>emb|CAN82739.1| hypothetical protein VITISV_015052 [Vitis vinifera]
          Length = 275

 Score = 53.1 bits (126), Expect(2) = 6e-11
 Identities = 31/59 (52%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
 Frame = +1

Query: 391 VVDNDNLPCLDNEIISPISDNACVNP--VVPKHLGITVIQNDENILVPLGNEYGWQVWI 561
           VV N+ L  LD  II PISD++ V+P  VVPK  GITV++NDE  L+P     GW+V I
Sbjct: 4   VVRNEVLKLLDAGIIYPISDSSWVSPTQVVPKKSGITVMKNDEGELIPTRLTTGWRVCI 62



 Score = 40.8 bits (94), Expect(2) = 6e-11
 Identities = 23/66 (34%), Positives = 33/66 (50%)
 Frame = +2

Query: 578 NFLKRNYHFSLSFLDSILKESVGYAHNCSSVANSNYFQLPRPPENHTKSTLGCLFVSLII 757
           N + +  HF L FLD +L+  VG+ + C     S YFQ+    E+  K+T  C F     
Sbjct: 68  NAVTKKDHFPLPFLDQVLERVVGHDYYCFLDGYSGYFQIAIALEDQEKTTFTCPF-GTYA 126

Query: 758 YSRIVF 775
           Y R+ F
Sbjct: 127 YRRMPF 132


>emb|CAN65719.1| hypothetical protein VITISV_020846 [Vitis vinifera]
          Length = 1791

 Score = 53.1 bits (126), Expect(2) = 2e-10
 Identities = 31/59 (52%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
 Frame = +1

Query: 391  VVDNDNLPCLDNEIISPISDNACVNP--VVPKHLGITVIQNDENILVPLGNEYGWQVWI 561
            VV N+ L  LD  II PISD++ V+P  VVPK  GITV++NDE  L+P     GW+V I
Sbjct: 914  VVRNEVLKLLDAGIIYPISDSSWVSPTQVVPKKSGITVMKNDEGELIPTRLTTGWRVCI 972



 Score = 39.3 bits (90), Expect(2) = 2e-10
 Identities = 22/66 (33%), Positives = 32/66 (48%)
 Frame = +2

Query: 578  NFLKRNYHFSLSFLDSILKESVGYAHNCSSVANSNYFQLPRPPENHTKSTLGCLFVSLII 757
            N + +  HF L FLD +L+   G+ + C     S YFQ+    E+  K+T  C F     
Sbjct: 978  NAVTKKDHFPLPFLDQVLERVAGHDYYCFLDGYSGYFQIAIALEDQEKTTFTCPF-GTYA 1036

Query: 758  YSRIVF 775
            Y R+ F
Sbjct: 1037 YRRMPF 1042


>ref|XP_003631849.1| PREDICTED: uncharacterized protein LOC100259900 [Vitis vinifera]
          Length = 1409

 Score = 53.1 bits (126), Expect(2) = 2e-10
 Identities = 31/59 (52%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
 Frame = +1

Query: 391  VVDNDNLPCLDNEIISPISDNACVNP--VVPKHLGITVIQNDENILVPLGNEYGWQVWI 561
            VV N+ L  LD  II PISD++ V+P  VVPK  GITV++NDE  L+P     GW+V I
Sbjct: 888  VVRNEVLKLLDAGIIYPISDSSWVSPTQVVPKKSGITVMKNDEGELIPTRLTTGWRVCI 946



 Score = 39.3 bits (90), Expect(2) = 2e-10
 Identities = 22/66 (33%), Positives = 32/66 (48%)
 Frame = +2

Query: 578  NFLKRNYHFSLSFLDSILKESVGYAHNCSSVANSNYFQLPRPPENHTKSTLGCLFVSLII 757
            N + +  HF L FLD +L+   G+ + C     S YFQ+    E+  K+T  C F     
Sbjct: 952  NAVTKKDHFPLPFLDQVLERVAGHDYYCFLDGYSGYFQIAIALEDQEKTTFTCPF-GTYA 1010

Query: 758  YSRIVF 775
            Y R+ F
Sbjct: 1011 YRRMPF 1016


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