BLASTX nr result

ID: Panax21_contig00021218 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00021218
         (810 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633412.1| PREDICTED: ZF-HD homeobox protein At4g24660 ...   321   1e-85
ref|XP_002525870.1| transcription factor, putative [Ricinus comm...   307   2e-81
gb|ABY61024.1| zinc finger-homeodomain protein 2 [Saruma henryi]      303   2e-80
ref|XP_002328807.1| predicted protein [Populus trichocarpa] gi|2...   287   2e-75
ref|XP_003529692.1| PREDICTED: ZF-HD homeobox protein At4g24660-...   262   8e-68

>ref|XP_003633412.1| PREDICTED: ZF-HD homeobox protein At4g24660 [Vitis vinifera]
          Length = 281

 Score =  321 bits (822), Expect = 1e-85
 Identities = 174/275 (63%), Positives = 201/275 (73%), Gaps = 29/275 (10%)
 Frame = +3

Query: 72  VSLSSQDEEMPIPINSTYG----------HSHMIHDDPPPPPQTHN-IVPNSVSQIPSNG 218
           + L+SQ+ E+PIPINS YG          H HMIH DP P    HN I+ +S  QIPSNG
Sbjct: 1   MELTSQEGEIPIPINSAYGGGGGHGHGHGHGHMIHHDPAP----HNHIIHSSAPQIPSNG 56

Query: 219 P-----MEDHLPYKKMDKYRECLKNHAAAMGGNATDGCGEFMPSGEENTLEALTCSACNC 383
           P     +EDH+PYKK  +YRECLKNHAAAMGGNATDGCGEFMP GEE TLEAL CSAC+C
Sbjct: 57  PPIPSTLEDHVPYKKAVRYRECLKNHAAAMGGNATDGCGEFMPGGEEGTLEALNCSACHC 116

Query: 384 HRNFHRKEIQGETTFWD-----NRRNIGRKLILGHH---FGTQQ--YPTTGNTLVPSRAA 533
           HRNFHRKE++GE +  D     +   +GRK+ILGHH    G +   YPT   TL+ SR  
Sbjct: 117 HRNFHRKEVEGERSSCDCFHSPHLNRVGRKVILGHHKNIIGPEALGYPT--GTLISSRPP 174

Query: 534 HPHQMMMSTHNMMGSFPSESD---DNGHRFGTVAKAPHLMRKRFRTKFSQQQKEKMLNFA 704
            PHQM+MS +  MGS PSESD   D G   G VA+ P L++KRFRTKFSQ+QKEKML+FA
Sbjct: 175 PPHQMIMSYN--MGSLPSESDEQEDGGG--GVVARPPQLVKKRFRTKFSQEQKEKMLSFA 230

Query: 705 EKVGWKIQKQEESVVQQFCQEVGVKRRVLKVWMHN 809
           EKVGWKIQKQEE+VVQQFCQE+GVKRRVLKVWMHN
Sbjct: 231 EKVGWKIQKQEEAVVQQFCQEIGVKRRVLKVWMHN 265


>ref|XP_002525870.1| transcription factor, putative [Ricinus communis]
           gi|223534875|gb|EEF36564.1| transcription factor,
           putative [Ricinus communis]
          Length = 311

 Score =  307 bits (786), Expect = 2e-81
 Identities = 167/283 (59%), Positives = 196/283 (69%), Gaps = 37/283 (13%)
 Frame = +3

Query: 72  VSLSSQDEEMPIPINSTYG-----------HSHMIHDDPPPPPQTHNIVPNSVSQIPSN- 215
           + LSS + E+PIP+NSTYG           H HMIH D       ++I+P+S  Q+ SN 
Sbjct: 1   MELSSHEVEIPIPLNSTYGGGHGHAHGGHGHGHMIHHDHHNSTPHNHIIPSSAPQLTSNN 60

Query: 216 GP-------MEDH-------LPYKKMDKYRECLKNHAAAMGGNATDGCGEFMPSGEENTL 353
           GP       ++DH         +KKM KY+ECLKNHAAAMGGNATDGCGEFMPSGEE ++
Sbjct: 61  GPSSLPNTGLDDHHHVTSTTSTFKKMVKYKECLKNHAAAMGGNATDGCGEFMPSGEEGSI 120

Query: 354 EALTCSACNCHRNFHRKEIQGETTFWD----NRRNIGRKLILGHHFG-----TQQYPTTG 506
           EALTCSACNCHRNFHRKEI GET   D    +   +GRK+ILGHH          YPT  
Sbjct: 121 EALTCSACNCHRNFHRKEIDGETNPCDYYPPHFNRVGRKVILGHHKNILAPEALGYPTGT 180

Query: 507 NTLVPSRA-AHPHQMMMSTHNMMGSFPSESDDNGHRFGTV-AKAPHLMRKRFRTKFSQQQ 680
            TLVPSRA   PH  M+ ++NM GS PSESD+     G V A+   L++KR+RTKFSQ+Q
Sbjct: 181 GTLVPSRATVAPHHQMIMSYNMGGSLPSESDEQEDGGGVVMARPQQLVKKRYRTKFSQEQ 240

Query: 681 KEKMLNFAEKVGWKIQKQEESVVQQFCQEVGVKRRVLKVWMHN 809
           KEKMLNFAEKVGWKIQKQEE+VVQQFCQE+GVKRRVLKVWMHN
Sbjct: 241 KEKMLNFAEKVGWKIQKQEEAVVQQFCQEIGVKRRVLKVWMHN 283


>gb|ABY61024.1| zinc finger-homeodomain protein 2 [Saruma henryi]
          Length = 258

 Score =  303 bits (777), Expect = 2e-80
 Identities = 159/256 (62%), Positives = 200/256 (78%), Gaps = 10/256 (3%)
 Frame = +3

Query: 72  VSLSSQDE-EMPIPINSTYGHS-HMIHDDPPPPPQTHNIVPNSVSQIPSNGPMEDHLPYK 245
           +++S+ DE ++P+PI S+YGH  HMIHD   PPP TH I+P++   +PSNGP+EDHLPYK
Sbjct: 1   MNISAADEGDIPLPITSSYGHHIHMIHD---PPPHTH-IIPSTAPPLPSNGPLEDHLPYK 56

Query: 246 KMDKYRECLKNHAAAMGGNATDGCGEFMPSGEENTLEALTCSACNCHRNFHRKEIQGETT 425
           K+ +YRECLKNHAA+MGGNATDGCGEFMPSGEE ++EAL CSAC+CHRNFHRKEI+GET+
Sbjct: 57  KVVRYRECLKNHAASMGGNATDGCGEFMPSGEEGSIEALKCSACSCHRNFHRKEIEGETS 116

Query: 426 FWD-----NRRNIGRKLILGHHFGTQQYPTTGNTLVPSRAAHPHQMMMSTHNMMGSFPSE 590
            WD      R+ +G+K +L        YPT   +L+P     PH  M+ ++N +G+ PSE
Sbjct: 117 -WDCCHLKARKVVGQKGVLIAGSDAFGYPT--GSLIP----RPHPQMIMSYN-LGALPSE 168

Query: 591 SD--DNGHRFGTVAKAP-HLMRKRFRTKFSQQQKEKMLNFAEKVGWKIQKQEESVVQQFC 761
           SD  D G   G++A  P  L++KRFRTKF+Q+QKEKML+FAEKVGW+IQKQEESVVQQFC
Sbjct: 169 SDEQDGGVGGGSMACRPLPLVKKRFRTKFTQEQKEKMLSFAEKVGWRIQKQEESVVQQFC 228

Query: 762 QEVGVKRRVLKVWMHN 809
           QE+GVKRRVLKVWMHN
Sbjct: 229 QEIGVKRRVLKVWMHN 244


>ref|XP_002328807.1| predicted protein [Populus trichocarpa] gi|222839105|gb|EEE77456.1|
           predicted protein [Populus trichocarpa]
          Length = 271

 Score =  287 bits (735), Expect = 2e-75
 Identities = 153/263 (58%), Positives = 185/263 (70%), Gaps = 17/263 (6%)
 Frame = +3

Query: 72  VSLSSQDEEMPIPINSTYG------HSHMIHDDPPPPPQTHN-IVPNSVSQIPS--NGPM 224
           + LSS +  +PIP+NST+G      H H+IH D P  P  HN I+ ++  QIPS  NG  
Sbjct: 1   MELSSHEAGIPIPLNSTFGGAHGHGHGHLIHHDHPAVPHNHNNIISSTAPQIPSSNNGTS 60

Query: 225 -------EDHLPYKKMDKYRECLKNHAAAMGGNATDGCGEFMPSGEENTLEALTCSACNC 383
                  ++H+PYKKM +YRECLKNHAA+MGGNATDGCGEFMPSGEE ++EALTCSACNC
Sbjct: 61  ITTASIDDNHVPYKKMVRYRECLKNHAASMGGNATDGCGEFMPSGEEGSIEALTCSACNC 120

Query: 384 HRNFHRKEIQGETTFWDNRRNIGRKLILGHHFGTQQYPTTGNTLVPSRAAHPHQMMMSTH 563
           HRNFHRKEI+GE T               +H     +   G  ++ + A H HQM+MS +
Sbjct: 121 HRNFHRKEIEGEHTSCTGDH--------CYHNSPVHFNRLGRKVILASAPH-HQMIMSYN 171

Query: 564 NMMGSFPSESDDNGHRFGT-VAKAPHLMRKRFRTKFSQQQKEKMLNFAEKVGWKIQKQEE 740
             MGS PSESD+     G  +A+   LM+KRFRTKFSQ+QKEKMLNFAEKVGWK+QKQEE
Sbjct: 172 --MGSLPSESDEQEDGGGVLMARPAQLMKKRFRTKFSQEQKEKMLNFAEKVGWKLQKQEE 229

Query: 741 SVVQQFCQEVGVKRRVLKVWMHN 809
           +VVQQFCQE+GVKRRVLKVWMHN
Sbjct: 230 TVVQQFCQEIGVKRRVLKVWMHN 252


>ref|XP_003529692.1| PREDICTED: ZF-HD homeobox protein At4g24660-like [Glycine max]
          Length = 283

 Score =  262 bits (669), Expect = 8e-68
 Identities = 159/280 (56%), Positives = 186/280 (66%), Gaps = 34/280 (12%)
 Frame = +3

Query: 72  VSLSSQDEEMPIPINS--TYGHSH------MIHDDPPPPPQTHNIVPNSVSQIPSNG--- 218
           + LSSQ+ E+PIPINS  TYGH +      MIH D       HN + +S +  PSNG   
Sbjct: 1   MELSSQEGEIPIPINSSTTYGHGNGHGHGLMIHHD-------HNHIISSTA--PSNGIPT 51

Query: 219 --PMEDHL--PYKKMDKYRECLKNHAAAMGGNATDGCGEFMPSGEENTLEALTCSACNCH 386
               EDH    YKK+ +YRECLKNHAAAMGGNATDGCGEFMPSGEE T+EAL CSAC+CH
Sbjct: 52  MQQEEDHGLGSYKKVVRYRECLKNHAAAMGGNATDGCGEFMPSGEEGTIEALNCSACHCH 111

Query: 387 RNFHRKEIQGETTFWDNRRNIGRKL-ILGHHFG-----TQQYPTTGNTLVPSRAAHPHQM 548
           RNFHRKE++GE +   +  NI R+  ILG H          YPT       +R+  PHQM
Sbjct: 112 RNFHRKEVEGEPSCDYHHLNINRRRHILGPHKNLLPPEALGYPTA------ARSVPPHQM 165

Query: 549 MMSTHNMMG---SFPSESD---DNGHRFGTV-------AKAPHLMRKRFRTKFSQQQKEK 689
           +M  +N+ G     PSESD   D G   G V       +    L++KRFRTKFSQ+QK+K
Sbjct: 166 IM-PYNIGGIGHHLPSESDEQEDGGGGGGMVQLSSRPISSQQQLVKKRFRTKFSQEQKDK 224

Query: 690 MLNFAEKVGWKIQKQEESVVQQFCQEVGVKRRVLKVWMHN 809
           MLNFAEKVGWKIQKQEESVVQQFCQE+GVKRRVLKVWMHN
Sbjct: 225 MLNFAEKVGWKIQKQEESVVQQFCQEIGVKRRVLKVWMHN 264


Top