BLASTX nr result

ID: Panax21_contig00021215 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00021215
         (558 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632652.1| PREDICTED: ubiquitin-conjugating enzyme E2 v...   100   3e-19
tpg|DAA60927.1| TPA: hypothetical protein ZEAMMB73_653551 [Zea m...    94   1e-17
gb|ABA26987.1| TO38-23 [Taraxacum officinale]                          94   2e-17
ref|NP_001190073.1| ubiquitin-conjugating enzyme E2 variant 1D [...    93   3e-17
ref|XP_002881424.1| hypothetical protein ARALYDRAFT_482581 [Arab...    93   3e-17

>ref|XP_003632652.1| PREDICTED: ubiquitin-conjugating enzyme E2 variant 1D-like isoform
           4 [Vitis vinifera]
          Length = 171

 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 43/49 (87%), Positives = 47/49 (95%)
 Frame = +2

Query: 410 FVYIFLQSVHEGRIYQLKLFCDKDYPDKPPTVRFHSRINMTCVNHETGV 556
           F +IF Q+VHEGRIYQLKLFCDKDYP+KPP+VRFHSRINMTCVNHETGV
Sbjct: 77  FSFIFFQTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGV 125


>tpg|DAA60927.1| TPA: hypothetical protein ZEAMMB73_653551 [Zea mays]
          Length = 161

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 39/48 (81%), Positives = 47/48 (97%)
 Frame = +2

Query: 413 VYIFLQSVHEGRIYQLKLFCDKDYPDKPPTVRFHSRINMTCVNHETGV 556
           ++ +L++VHEGRIYQLKLFCDKDYP+KPP+VRFHSRIN+TCVNHETGV
Sbjct: 68  LFSYLKTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINLTCVNHETGV 115


>gb|ABA26987.1| TO38-23 [Taraxacum officinale]
          Length = 138

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 40/42 (95%), Positives = 42/42 (100%)
 Frame = +2

Query: 431 SVHEGRIYQLKLFCDKDYPDKPPTVRFHSRINMTCVNHETGV 556
           SVHEGRIYQLKLFCDKDYP+KPPTVRFHSR+NMTCVNHETGV
Sbjct: 51  SVHEGRIYQLKLFCDKDYPEKPPTVRFHSRVNMTCVNHETGV 92


>ref|NP_001190073.1| ubiquitin-conjugating enzyme E2 variant 1D [Arabidopsis thaliana]
           gi|332645441|gb|AEE78962.1| ubiquitin-conjugating enzyme
           E2 variant 1D [Arabidopsis thaliana]
          Length = 164

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 40/50 (80%), Positives = 44/50 (88%)
 Frame = +2

Query: 407 TFVYIFLQSVHEGRIYQLKLFCDKDYPDKPPTVRFHSRINMTCVNHETGV 556
           T +    Q+VHEGRIYQLKLFCDKDYP+KPPTVRFHSR+NM CVNHETGV
Sbjct: 69  TEINFMSQTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRVNMACVNHETGV 118


>ref|XP_002881424.1| hypothetical protein ARALYDRAFT_482581 [Arabidopsis lyrata subsp.
           lyrata] gi|297327263|gb|EFH57683.1| hypothetical protein
           ARALYDRAFT_482581 [Arabidopsis lyrata subsp. lyrata]
          Length = 146

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 40/42 (95%), Positives = 42/42 (100%)
 Frame = +2

Query: 431 SVHEGRIYQLKLFCDKDYPDKPPTVRFHSRINMTCVNHETGV 556
           +VHEGRIYQLKLFCDKDYP+KPPTVRFHSRINMTCVNHETGV
Sbjct: 59  TVHEGRIYQLKLFCDKDYPEKPPTVRFHSRINMTCVNHETGV 100


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