BLASTX nr result

ID: Panax21_contig00021210 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00021210
         (397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20191.3| unnamed protein product [Vitis vinifera]              121   7e-26
ref|XP_002285451.1| PREDICTED: uroporphyrinogen decarboxylase 1,...   121   7e-26
emb|CAN82689.1| hypothetical protein VITISV_026490 [Vitis vinifera]   119   3e-25
gb|AFK42086.1| unknown [Lotus japonicus]                              114   6e-24
ref|XP_003540489.1| PREDICTED: uroporphyrinogen decarboxylase 1,...   114   6e-24

>emb|CBI20191.3| unnamed protein product [Vitis vinifera]
          Length = 1560

 Score =  121 bits (303), Expect = 7e-26
 Identities = 71/101 (70%), Positives = 77/101 (76%), Gaps = 1/101 (0%)
 Frame = +3

Query: 96   MSFSSVPSASCCCNLGWKSSSLFVQLGFLSNGVF-LSPKPKLSPHKFPQVSASFSSDPLL 272
            MS SS P++ CCC LGW SSS  VQLGFL    F +S +P    H F   S+   SDPLL
Sbjct: 1152 MSLSS-PTSMCCC-LGWSSSSS-VQLGFLPARFFRVSSRPTKRFH-FKCSSSVPDSDPLL 1207

Query: 273  VKAARGDPVTRPPAWMMRQAGRYMAVYRKLAEKYPSFRERS 395
            VKAARGDPVTRPPAWMMRQAGRYMAVYRKLAEKYPSFR+RS
Sbjct: 1208 VKAARGDPVTRPPAWMMRQAGRYMAVYRKLAEKYPSFRQRS 1248


>ref|XP_002285451.1| PREDICTED: uroporphyrinogen decarboxylase 1, chloroplastic-like
           [Vitis vinifera]
          Length = 409

 Score =  121 bits (303), Expect = 7e-26
 Identities = 71/101 (70%), Positives = 77/101 (76%), Gaps = 1/101 (0%)
 Frame = +3

Query: 96  MSFSSVPSASCCCNLGWKSSSLFVQLGFLSNGVF-LSPKPKLSPHKFPQVSASFSSDPLL 272
           MS SS P++ CCC LGW SSS  VQLGFL    F +S +P    H F   S+   SDPLL
Sbjct: 1   MSLSS-PTSMCCC-LGWSSSSS-VQLGFLPARFFRVSSRPTKRFH-FKCSSSVPDSDPLL 56

Query: 273 VKAARGDPVTRPPAWMMRQAGRYMAVYRKLAEKYPSFRERS 395
           VKAARGDPVTRPPAWMMRQAGRYMAVYRKLAEKYPSFR+RS
Sbjct: 57  VKAARGDPVTRPPAWMMRQAGRYMAVYRKLAEKYPSFRQRS 97


>emb|CAN82689.1| hypothetical protein VITISV_026490 [Vitis vinifera]
          Length = 412

 Score =  119 bits (298), Expect = 3e-25
 Identities = 70/102 (68%), Positives = 75/102 (73%), Gaps = 2/102 (1%)
 Frame = +3

Query: 96  MSFSSVPSASCCCNLGWKSSSLFVQLGFLSNGVF-LSPKPKLSPH-KFPQVSASFSSDPL 269
           MS SS P++ CCC LGW SSS  VQLGFL    F +S +P    H K         SDPL
Sbjct: 1   MSLSS-PTSMCCC-LGW-SSSTSVQLGFLPARFFRVSSRPTKRFHFKCSSSVPDSGSDPL 57

Query: 270 LVKAARGDPVTRPPAWMMRQAGRYMAVYRKLAEKYPSFRERS 395
           LVKAARGDPVTRPPAWMMRQAGRYMAVYRKLAEKYPSFR+RS
Sbjct: 58  LVKAARGDPVTRPPAWMMRQAGRYMAVYRKLAEKYPSFRQRS 99


>gb|AFK42086.1| unknown [Lotus japonicus]
          Length = 407

 Score =  114 bits (286), Expect = 6e-24
 Identities = 62/91 (68%), Positives = 65/91 (71%), Gaps = 3/91 (3%)
 Frame = +3

Query: 132 CNLGWKSSSLFVQ---LGFLSNGVFLSPKPKLSPHKFPQVSASFSSDPLLVKAARGDPVT 302
           C LGWKSSSLF      GF        PKPK S       +AS SSDPLLVKA RGDP +
Sbjct: 8   CGLGWKSSSLFAHSTSTGFNLISPSFKPKPKFS---LTCSAASSSSDPLLVKATRGDPAS 64

Query: 303 RPPAWMMRQAGRYMAVYRKLAEKYPSFRERS 395
           RPPAWMMRQAGRYMAVYRKLAEK+PSFRERS
Sbjct: 65  RPPAWMMRQAGRYMAVYRKLAEKHPSFRERS 95


>ref|XP_003540489.1| PREDICTED: uroporphyrinogen decarboxylase 1, chloroplastic-like
           [Glycine max]
          Length = 410

 Score =  114 bits (286), Expect = 6e-24
 Identities = 62/89 (69%), Positives = 69/89 (77%), Gaps = 3/89 (3%)
 Frame = +3

Query: 138 LGWKSSSLFVQL--GF-LSNGVFLSPKPKLSPHKFPQVSASFSSDPLLVKAARGDPVTRP 308
           LGWK SSLFVQ   GF +++  F    P+ S       +AS SSDPLLVKAARGDPV+RP
Sbjct: 10  LGWKHSSLFVQSNNGFNVASPPFKHKPPRSSKFSLTCSAASSSSDPLLVKAARGDPVSRP 69

Query: 309 PAWMMRQAGRYMAVYRKLAEKYPSFRERS 395
           PAWMMRQAGRYMAVY+KLAEKYPSFRERS
Sbjct: 70  PAWMMRQAGRYMAVYKKLAEKYPSFRERS 98


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