BLASTX nr result

ID: Panax21_contig00021198 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00021198
         (625 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284547.1| PREDICTED: carnitinyl-CoA dehydratase-like [...   115   4e-32
ref|XP_002284541.1| PREDICTED: carnitinyl-CoA dehydratase-like [...   115   3e-31
emb|CAN82902.1| hypothetical protein VITISV_036844 [Vitis vinifera]   111   6e-30
ref|XP_003543071.1| PREDICTED: 3-hydroxypropionyl-coenzyme A deh...   103   1e-27
ref|XP_004134080.1| PREDICTED: carnitinyl-CoA dehydratase-like [...    98   3e-27

>ref|XP_002284547.1| PREDICTED: carnitinyl-CoA dehydratase-like [Vitis vinifera]
          Length = 238

 Score =  115 bits (289), Expect(2) = 4e-32
 Identities = 56/79 (70%), Positives = 68/79 (86%)
 Frame = -2

Query: 378 RDVLLRAMKVKAEEAVAMGLIDSAHDSGESTVEAAVRLGEVLAKRKWDGGVYGEIRKALY 199
           RDV+LRA KVKAEEAV MG++DSAHDS ESTVEAAVRL E L+ RKW+G VY EIRKA++
Sbjct: 160 RDVMLRAKKVKAEEAVRMGIVDSAHDSAESTVEAAVRLAEQLSGRKWNGEVYAEIRKAMH 219

Query: 198 PELCGVLGLADKAIVPSRL 142
           PE+CG+LGL+ +A+V  RL
Sbjct: 220 PEVCGLLGLSHRAVVAPRL 238



 Score = 48.1 bits (113), Expect(2) = 4e-32
 Identities = 20/27 (74%), Positives = 24/27 (88%)
 Frame = -3

Query: 575 SHDHVLMRRDRGVLYMSEIDIGMTLPD 495
           SHD+VLM+ DR VLYMSE+DIG+T PD
Sbjct: 117 SHDYVLMKNDRSVLYMSELDIGLTFPD 143


>ref|XP_002284541.1| PREDICTED: carnitinyl-CoA dehydratase-like [Vitis vinifera]
          Length = 238

 Score =  115 bits (289), Expect(2) = 3e-31
 Identities = 56/79 (70%), Positives = 68/79 (86%)
 Frame = -2

Query: 378 RDVLLRAMKVKAEEAVAMGLIDSAHDSGESTVEAAVRLGEVLAKRKWDGGVYGEIRKALY 199
           RDV+LRA KVKAEEAV MG++DSAHDS ESTVEAAVRL E L+ RKW+G VY EIRKA++
Sbjct: 160 RDVMLRAKKVKAEEAVRMGIVDSAHDSAESTVEAAVRLAEQLSGRKWNGEVYAEIRKAMH 219

Query: 198 PELCGVLGLADKAIVPSRL 142
           PE+CG+LGL+ +A+V  RL
Sbjct: 220 PEVCGLLGLSHRAVVAPRL 238



 Score = 45.1 bits (105), Expect(2) = 3e-31
 Identities = 19/27 (70%), Positives = 23/27 (85%)
 Frame = -3

Query: 575 SHDHVLMRRDRGVLYMSEIDIGMTLPD 495
           SHD+VLM+ DR VLYMSE+DIG+T  D
Sbjct: 117 SHDYVLMKNDRSVLYMSELDIGLTFAD 143


>emb|CAN82902.1| hypothetical protein VITISV_036844 [Vitis vinifera]
          Length = 238

 Score =  111 bits (278), Expect(2) = 6e-30
 Identities = 53/75 (70%), Positives = 65/75 (86%)
 Frame = -2

Query: 378 RDVLLRAMKVKAEEAVAMGLIDSAHDSGESTVEAAVRLGEVLAKRKWDGGVYGEIRKALY 199
           RDV+LRA KVKAEEAV MG++DS HDS ESTVEAAVRL E L+ RKW+G VY EIRKA++
Sbjct: 160 RDVMLRAKKVKAEEAVRMGIVDSTHDSAESTVEAAVRLAEQLSGRKWNGEVYAEIRKAMH 219

Query: 198 PELCGVLGLADKAIV 154
           PE+CG+LGL+ +A+V
Sbjct: 220 PEVCGLLGLSHRAVV 234



 Score = 45.1 bits (105), Expect(2) = 6e-30
 Identities = 19/27 (70%), Positives = 23/27 (85%)
 Frame = -3

Query: 575 SHDHVLMRRDRGVLYMSEIDIGMTLPD 495
           SHD+VLM+ DR VLYMSE+DIG+T  D
Sbjct: 117 SHDYVLMKNDRSVLYMSELDIGLTFAD 143


>ref|XP_003543071.1| PREDICTED: 3-hydroxypropionyl-coenzyme A dehydratase-like [Glycine
           max]
          Length = 241

 Score =  103 bits (256), Expect(2) = 1e-27
 Identities = 51/75 (68%), Positives = 60/75 (80%)
 Frame = -2

Query: 378 RDVLLRAMKVKAEEAVAMGLIDSAHDSGESTVEAAVRLGEVLAKRKWDGGVYGEIRKALY 199
           RD++L   K+ A EAV MG++DSAHDS ESTVEAA+RLGE LA+RKW G VY EIRK+LY
Sbjct: 164 RDLVLGGAKLTAAEAVRMGIVDSAHDSAESTVEAAMRLGEQLARRKWVGEVYAEIRKSLY 223

Query: 198 PELCGVLGLADKAIV 154
           P+ C VLGL  KAIV
Sbjct: 224 PDACKVLGLTQKAIV 238



 Score = 45.8 bits (107), Expect(2) = 1e-27
 Identities = 19/26 (73%), Positives = 23/26 (88%)
 Frame = -3

Query: 575 SHDHVLMRRDRGVLYMSEIDIGMTLP 498
           SHD+VLMR DRGVLYM E+D+G+ LP
Sbjct: 121 SHDYVLMRSDRGVLYMPEVDLGLPLP 146


>ref|XP_004134080.1| PREDICTED: carnitinyl-CoA dehydratase-like [Cucumis sativus]
           gi|449523557|ref|XP_004168790.1| PREDICTED:
           carnitinyl-CoA dehydratase-like [Cucumis sativus]
          Length = 239

 Score = 97.8 bits (242), Expect(2) = 3e-27
 Identities = 49/79 (62%), Positives = 59/79 (74%)
 Frame = -2

Query: 378 RDVLLRAMKVKAEEAVAMGLIDSAHDSGESTVEAAVRLGEVLAKRKWDGGVYGEIRKALY 199
           RDVL+R MKVK E AV MG+ DSAHD     +EAAVRLGE L +RKW+G  Y EIRK+LY
Sbjct: 161 RDVLMRGMKVKGEAAVKMGIADSAHDGENGVMEAAVRLGEQLGERKWNGEPYAEIRKSLY 220

Query: 198 PELCGVLGLADKAIVPSRL 142
           PE+  +LGL +KAI  S+L
Sbjct: 221 PEISRLLGLPEKAISISKL 239



 Score = 49.7 bits (117), Expect(2) = 3e-27
 Identities = 20/27 (74%), Positives = 26/27 (96%)
 Frame = -3

Query: 575 SHDHVLMRRDRGVLYMSEIDIGMTLPD 495
           SHD++LMR DRGVLYMSE+D+G++LPD
Sbjct: 118 SHDYLLMRSDRGVLYMSEVDLGLSLPD 144


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