BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00021185
         (1082 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265193.1| PREDICTED: cleavage stimulation factor subun...   223   6e-56
ref|XP_002303484.1| predicted protein [Populus trichocarpa] gi|2...   209   1e-51
ref|XP_004165274.1| PREDICTED: LOW QUALITY PROTEIN: cleavage sti...   207   4e-51
ref|XP_004144686.1| PREDICTED: cleavage stimulation factor subun...   207   4e-51
ref|XP_002519397.1| plant RNA cleavage stimulation factor, putat...   199   1e-48

>ref|XP_002265193.1| PREDICTED: cleavage stimulation factor subunit 3 [Vitis vinifera]
            gi|297736046|emb|CBI24084.3| unnamed protein product
            [Vitis vinifera]
          Length = 769

 Score =  223 bits (568), Expect = 6e-56
 Identities = 136/265 (51%), Positives = 151/265 (56%), Gaps = 8/265 (3%)
 Frame = -3

Query: 1080 SRYSFMDLWPCSSKDLDNLVWQEWLXXXXXXXXXXXSLANGAGPIDK-ASGLTTNSNSSA 904
            SRYSFMDLWPCSS+DLD+L  QEWL           ++  G G  +K ASG TTNSN + 
Sbjct: 509  SRYSFMDLWPCSSRDLDHLARQEWLAKNINKKVEKSAILKGVGSTEKSASGFTTNSNPAT 568

Query: 903  KVIYPDTSRMMVYDPRQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP------NDILR 742
            KV YPDTS+M+VYDPRQK                                     ++IL+
Sbjct: 569  KVFYPDTSQMVVYDPRQKPGTGALPSTTAPVLPSISGTLSNPSVPMVSSRPANPLDEILK 628

Query: 741  AAPPALVAFIANLPAVEGPSPDVDFVLSICLQSNFPTVQAGKSGTTSMQLQGIPAPSTSD 562
            + PPALVAFIANLPAVEGPSPDVD VLSICLQSN  T Q G     S QL   P PSTSD
Sbjct: 629  STPPALVAFIANLPAVEGPSPDVDVVLSICLQSNVSTGQTG----LSTQLAAGPVPSTSD 684

Query: 561  XXXXXXXXXXXXXXSFKPTXXXXXXXXXXXXXXXXXDTATVQSQPLPKDVFKIRQLRKAR 382
                          SFKP                  +TAT QS PLP+DVFKIRQ+RKAR
Sbjct: 685  LSGSSKSHPVPSGSSFKPMRDRQPGKRKDLDRQEDDETATAQSLPLPRDVFKIRQIRKAR 744

Query: 381  -ATGSQTGSASYGSTFSGELSGSTG 310
              T SQTGSASYGS FSGELSGSTG
Sbjct: 745  GGTTSQTGSASYGSAFSGELSGSTG 769


>ref|XP_002303484.1| predicted protein [Populus trichocarpa] gi|222840916|gb|EEE78463.1|
            predicted protein [Populus trichocarpa]
          Length = 769

 Score =  209 bits (532), Expect = 1e-51
 Identities = 124/260 (47%), Positives = 154/260 (59%), Gaps = 4/260 (1%)
 Frame = -3

Query: 1080 SRYSFMDLWPCSSKDLDNLVWQEWLXXXXXXXXXXXSLANGAGPIDK-ASGLTTNSNSSA 904
            SRYSFMDLWPCSSKDLD+L  QEWL           +++NG   +DK  +GL +NSN S 
Sbjct: 512  SRYSFMDLWPCSSKDLDHLARQEWLAKNINKKAEKSAVSNGPATLDKIPAGLASNSNVSG 571

Query: 903  KVIYPDTSRMMVYDPRQK-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNDILRAAPPA 727
            KVIYPDTS+ ++YDPRQK                                +++L+A PPA
Sbjct: 572  KVIYPDTSQTVIYDPRQKLEAGIPPSTTASGFKAASNPLSNPIGLAPNVFDEVLKATPPA 631

Query: 726  LVAFIANLPAVEGPSPDVDFVLSICLQSNFPTVQAGKSGTTSMQLQGIPAPSTSDXXXXX 547
            L++F+ANLP VEGP+P+VD VLSICLQS+ P  + GKSGTT  Q   +  P+TSD     
Sbjct: 632  LISFLANLPVVEGPAPNVDIVLSICLQSDVPVGKTGKSGTT--QTPMLSGPATSDLSGSS 689

Query: 546  XXXXXXXXXSFKPTXXXXXXXXXXXXXXXXXDTATVQSQPLPKDVFKIRQLRKAR--ATG 373
                     SFK T                 +TATVQSQPLP+DVF+IRQ++K+R  AT 
Sbjct: 690  RSRPVPSGSSFK-TRDRQSGKRKDRDRQEEDETATVQSQPLPRDVFRIRQIQKSRAAATT 748

Query: 372  SQTGSASYGSTFSGELSGST 313
            SQTGS SYGS  SG+LSGST
Sbjct: 749  SQTGSVSYGSALSGDLSGST 768


>ref|XP_004165274.1| PREDICTED: LOW QUALITY PROTEIN: cleavage stimulation factor subunit
            3-like [Cucumis sativus]
          Length = 460

 Score =  207 bits (527), Expect = 4e-51
 Identities = 121/259 (46%), Positives = 148/259 (57%), Gaps = 2/259 (0%)
 Frame = -3

Query: 1080 SRYSFMDLWPCSSKDLDNLVWQEWLXXXXXXXXXXXSLANGAGPIDKAS-GLTTNSNSSA 904
            SRYSFMDLWPC+S DLDNL  QEWL           SL  G G +D  S G  ++S  S 
Sbjct: 203  SRYSFMDLWPCTSSDLDNLTRQEWLAKNISKNSEKSSLPGGTGFLDTGSAGFMSHSIPST 262

Query: 903  KVIYPDTSRMMVYDPRQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNDILRAAPPAL 724
            KV+YPDTS+M++YDP Q                                ++IL+A P AL
Sbjct: 263  KVVYPDTSQMVIYDPSQILGILPTATASGLPANPSNPVSVASGAPTSVFDEILKATPAAL 322

Query: 723  VAFIANLPAVEGPSPDVDFVLSICLQSNFPTVQAGKSGTTSMQLQGIPAPSTSDXXXXXX 544
            +AF+ANLPAV+GP+PDVD VLS+CL+S+ PTV   KSG T  Q+ G P P+TSD      
Sbjct: 323  IAFLANLPAVDGPTPDVDIVLSVCLESDLPTVPLVKSGATPAQVSGGPVPTTSD-LSGSS 381

Query: 543  XXXXXXXXSFKPTXXXXXXXXXXXXXXXXXDTATVQSQPLPKDVFKIRQLRKAR-ATGSQ 367
                    S K T                 ++ TVQSQP+PKD F+IRQ++KAR AT SQ
Sbjct: 382  KSHAFSNSSLKHTRDKQSGKRKDYDRQEDNESTTVQSQPMPKDXFRIRQIQKARGATSSQ 441

Query: 366  TGSASYGSTFSGELSGSTG 310
            TGSASYGS  SG+LSGSTG
Sbjct: 442  TGSASYGSAISGDLSGSTG 460


>ref|XP_004144686.1| PREDICTED: cleavage stimulation factor subunit 3-like [Cucumis
            sativus]
          Length = 871

 Score =  207 bits (527), Expect = 4e-51
 Identities = 121/259 (46%), Positives = 148/259 (57%), Gaps = 2/259 (0%)
 Frame = -3

Query: 1080 SRYSFMDLWPCSSKDLDNLVWQEWLXXXXXXXXXXXSLANGAGPIDKAS-GLTTNSNSSA 904
            SRYSFMDLWPC+S DLDNL  QEWL           SL  G G +D  S G  ++S  S 
Sbjct: 614  SRYSFMDLWPCTSSDLDNLTRQEWLAKNISKNSEKSSLPGGTGFLDTGSAGFMSHSIPST 673

Query: 903  KVIYPDTSRMMVYDPRQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNDILRAAPPAL 724
            KV+YPDTS+M++YDP Q                                ++IL+A P AL
Sbjct: 674  KVVYPDTSQMVIYDPSQILGILPTATASGLPANPSNPVSVASGAPTSVFDEILKATPAAL 733

Query: 723  VAFIANLPAVEGPSPDVDFVLSICLQSNFPTVQAGKSGTTSMQLQGIPAPSTSDXXXXXX 544
            +AF+ANLPAV+GP+PDVD VLS+CL+S+ PTV   KSG T  Q+ G P P+TSD      
Sbjct: 734  IAFLANLPAVDGPTPDVDIVLSVCLESDLPTVPLVKSGATPAQVSGGPVPTTSD-LSGSS 792

Query: 543  XXXXXXXXSFKPTXXXXXXXXXXXXXXXXXDTATVQSQPLPKDVFKIRQLRKAR-ATGSQ 367
                    S K T                 ++ TVQSQP+PKD F+IRQ++KAR AT SQ
Sbjct: 793  KSHAFSNSSLKHTRDKQSGKRKDYDRQEDNESTTVQSQPMPKDFFRIRQIQKARGATSSQ 852

Query: 366  TGSASYGSTFSGELSGSTG 310
            TGSASYGS  SG+LSGSTG
Sbjct: 853  TGSASYGSAISGDLSGSTG 871


>ref|XP_002519397.1| plant RNA cleavage stimulation factor, putative [Ricinus communis]
            gi|223541464|gb|EEF43014.1| plant RNA cleavage
            stimulation factor, putative [Ricinus communis]
          Length = 767

 Score =  199 bits (506), Expect = 1e-48
 Identities = 121/263 (46%), Positives = 148/263 (56%), Gaps = 7/263 (2%)
 Frame = -3

Query: 1080 SRYSFMDLWPCSSKDLDNLVWQEWLXXXXXXXXXXXSLANGAGPIDKAS-GLTTNSNSSA 904
            SRYSFMDLWPCSSKDLD+L  QEWL           +++NG G +D+ S GL +NS  SA
Sbjct: 510  SRYSFMDLWPCSSKDLDHLARQEWLAKNISKKMEKSTISNGLGILDRVSTGLKSNSAVSA 569

Query: 903  KVIYPDTSRMMVYDPRQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP-----NDILRA 739
            KVIYPDTS M +Y+PRQK                                    ++IL+A
Sbjct: 570  KVIYPDTSSMAIYEPRQKHEVGISLSTTATGFGSASNPSSNTIVGLVGSGANAFDEILKA 629

Query: 738  APPALVAFIANLPAVEGPSPDVDFVLSICLQSNFPTVQAGKSGTTSMQLQGIPAPSTSDX 559
             PPAL++F++ LP VEGP+P+VD VLSICLQS     Q GK G TS  +   PAP+TSD 
Sbjct: 630  TPPALISFLSTLPTVEGPTPNVDIVLSICLQSELTNGQMGKLG-TSPAVPAPPAPATSD- 687

Query: 558  XXXXXXXXXXXXXSFKPTXXXXXXXXXXXXXXXXXDTATVQSQPLPKDVFKIRQLRKAR- 382
                           KP+                 +TATVQSQPLP+D+F+IR  +KAR 
Sbjct: 688  ----LSGSSKSRPVLKPSRDRQSGKRKDIERQEEDETATVQSQPLPRDIFRIRHSQKARV 743

Query: 381  ATGSQTGSASYGSTFSGELSGST 313
             T SQTGSASYGS  SG+LSGST
Sbjct: 744  GTASQTGSASYGSALSGDLSGST 766