BLASTX nr result

ID: Panax21_contig00021179 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00021179
         (701 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302391.1| predicted protein [Populus trichocarpa] gi|2...    60   4e-07

>ref|XP_002302391.1| predicted protein [Populus trichocarpa] gi|222844117|gb|EEE81664.1|
           predicted protein [Populus trichocarpa]
          Length = 418

 Score = 60.1 bits (144), Expect = 4e-07
 Identities = 56/186 (30%), Positives = 85/186 (45%), Gaps = 33/186 (17%)
 Frame = -2

Query: 484 KQLGDLLQEQQEPFTLEIYLIERGYSKNKFNLELNTSSKFLK-----------------N 356
           KQL +LLQEQQEPF L IYL+ERGYS+   + E  +SS+F                   +
Sbjct: 10  KQLRELLQEQQEPFILNIYLLERGYSRKSSDSE--SSSRFCHVNSRKSQKRSVGRGLNIS 67

Query: 355 KKIIPICSKAVRALFNKLGYLNP--RINDSG-------TKKRKKNSQEIREENTFXXXXX 203
           K++ P  SK +RA+  ++  +    RIN S          ++ +++Q++ E + F     
Sbjct: 68  KRVNPQGSKVLRAVLKQVISIKQMLRINSSDHRGGKLKVNEKGRSNQQVAESDIFSTASS 127

Query: 202 XXXXXXXXXSDTE-------DRYISPRKGPQRNGNLLGEEEVDPDIKRQRRILEDNMQHS 44
                    S+ E       D  ++     Q        +E   D K Q+R +ED+ Q S
Sbjct: 128 TTVFNSISKSEVEAPCATQKDSLLTTNTCYQPLNLHNPTDETAADRKLQQRGIEDSRQLS 187

Query: 43  PVSVLE 26
           P SVLE
Sbjct: 188 PASVLE 193


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