BLASTX nr result
ID: Panax21_contig00021148
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00021148 (1141 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI34639.3| unnamed protein product [Vitis vinifera] 301 2e-79 ref|XP_004170627.1| PREDICTED: LOW QUALITY PROTEIN: nucleoporin ... 291 3e-76 ref|XP_002277144.1| PREDICTED: nuclear pore complex protein Nup9... 284 3e-74 ref|XP_004148101.1| PREDICTED: nucleoporin nup189-like [Cucumis ... 281 2e-73 ref|XP_002317654.1| predicted protein [Populus trichocarpa] gi|2... 281 3e-73 >emb|CBI34639.3| unnamed protein product [Vitis vinifera] Length = 1047 Score = 301 bits (772), Expect = 2e-79 Identities = 152/269 (56%), Positives = 192/269 (71%) Frame = +2 Query: 2 ENPRSLVIGPTEEWNLMANFENSSVAKNTSIHVYENGNVSVNVSAPGVDGSLYQNKDGNS 181 ENPRSLVI P E+W+L +N E +S K S V+ENG VS G++GS +KD N Sbjct: 765 ENPRSLVIRPMEQWSLRSNAEKTSPLKEASKPVHENGKVSEE----GLNGSNAGDKDANL 820 Query: 182 DQTSTSKDSAASAEHSHKPDGVHDDHLAPKGDSAIVDELTLKITYSFSSMGFSGGVDVMK 361 + +K+ + + + KP+GVHDDH KGDS I +++ + G D+ Sbjct: 821 VENGLAKERIHTMKPNQKPNGVHDDHSIQKGDSYIT---LTGHRAGEAAIVYEHGADIEA 877 Query: 362 LMPKIRHTDYYIEPRIEELAVKEISESGFCSNVKDFVVGWLGYGNIKFLGETDVRELDIE 541 LMPK+R +DYY EPRI+ELA KE +E GFC VKDFVVG GYG+IKF+GETDVR LD+E Sbjct: 878 LMPKLRRSDYYTEPRIQELAAKERAEPGFCRRVKDFVVGRHGYGSIKFMGETDVRRLDLE 937 Query: 542 SHVQFNDREVVVYMDETKKPLVGQGLNKPAEITLCNIKCIDKKTGKQYIDGPKVDMYKEM 721 S VQFN+REV+VYMD++KKP VGQGLNKPAE+TL NIKC DKKTG QY +GPK+ YKEM Sbjct: 938 SLVQFNNREVIVYMDDSKKPPVGQGLNKPAEVTLLNIKCFDKKTGVQYTEGPKIGKYKEM 997 Query: 722 LMKKTAEQGAEFVSYDPVQGDWKFKVQHF 808 L +K +QGAEFVSYDP++G+WKF+V HF Sbjct: 998 LKRKAEDQGAEFVSYDPMKGEWKFRVNHF 1026 >ref|XP_004170627.1| PREDICTED: LOW QUALITY PROTEIN: nucleoporin NUP145-like [Cucumis sativus] Length = 362 Score = 291 bits (744), Expect = 3e-76 Identities = 148/274 (54%), Positives = 195/274 (71%), Gaps = 5/274 (1%) Frame = +2 Query: 2 ENPRSLVIGPTEEWNLMANFENSSVAKNTSIHVYENGNVSVNVSAPGVDGSLYQNKDGNS 181 ENPR+LVI PT++W N + S +K+TS+ ENG V+ S+ + ++ +GN Sbjct: 87 ENPRALVIRPTDQWPSKGNLDKSLPSKDTSVR--ENGKVAERTSSAVNN---LKDTNGNV 141 Query: 182 DQTSTSKDSAASAEHSHKPDGVHDDHLAPKGDSAIVDELTLKITYSFSSMG-----FSGG 346 + TSK++ + + KP+GVH+DH APK D L T++ G + G Sbjct: 142 VENGTSKENIHLNKVNXKPNGVHEDHSAPKED--------LYRTFAGHRAGEAAIVYEHG 193 Query: 347 VDVMKLMPKIRHTDYYIEPRIEELAVKEISESGFCSNVKDFVVGWLGYGNIKFLGETDVR 526 D+ LMPK+RH+DYY EP+I+ELA KE +E GFC +VKDFVVG GYG+IKF GETDVR Sbjct: 194 ADIEALMPKLRHSDYYTEPKIQELAAKERAEPGFCRHVKDFVVGRHGYGSIKFFGETDVR 253 Query: 527 ELDIESHVQFNDREVVVYMDETKKPLVGQGLNKPAEITLCNIKCIDKKTGKQYIDGPKVD 706 LD+ES VQFN+REV+VY+DE+KKP GQGLNKPAE+T+ NIKC+DK+TG QY +GPKV+ Sbjct: 254 RLDLESIVQFNNREVIVYLDESKKPPCGQGLNKPAEVTILNIKCVDKQTGHQYTEGPKVE 313 Query: 707 MYKEMLMKKTAEQGAEFVSYDPVQGDWKFKVQHF 808 YKE+L KKT QGAEFVSYDPV+G+WKF+V+HF Sbjct: 314 KYKELLRKKTEAQGAEFVSYDPVKGEWKFRVEHF 347 >ref|XP_002277144.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform 1 [Vitis vinifera] Length = 1013 Score = 284 bits (726), Expect = 3e-74 Identities = 145/269 (53%), Positives = 182/269 (67%) Frame = +2 Query: 2 ENPRSLVIGPTEEWNLMANFENSSVAKNTSIHVYENGNVSVNVSAPGVDGSLYQNKDGNS 181 ENPRSLVI P E+W+L +N E +S K S V+EN N+ N Sbjct: 748 ENPRSLVIRPMEQWSLRSNAEKTSPLKEASKPVHENANLVEN------------------ 789 Query: 182 DQTSTSKDSAASAEHSHKPDGVHDDHLAPKGDSAIVDELTLKITYSFSSMGFSGGVDVMK 361 +K+ + + + KP+GVHDDH KGDS I +++ + G D+ Sbjct: 790 ---GLAKERIHTMKPNQKPNGVHDDHSIQKGDSYIT---LTGHRAGEAAIVYEHGADIEA 843 Query: 362 LMPKIRHTDYYIEPRIEELAVKEISESGFCSNVKDFVVGWLGYGNIKFLGETDVRELDIE 541 LMPK+R +DYY EPRI+ELA KE +E GFC VKDFVVG GYG+IKF+GETDVR LD+E Sbjct: 844 LMPKLRRSDYYTEPRIQELAAKERAEPGFCRRVKDFVVGRHGYGSIKFMGETDVRRLDLE 903 Query: 542 SHVQFNDREVVVYMDETKKPLVGQGLNKPAEITLCNIKCIDKKTGKQYIDGPKVDMYKEM 721 S VQFN+REV+VYMD++KKP VGQGLNKPAE+TL NIKC DKKTG QY +GPK+ YKEM Sbjct: 904 SLVQFNNREVIVYMDDSKKPPVGQGLNKPAEVTLLNIKCFDKKTGVQYTEGPKIGKYKEM 963 Query: 722 LMKKTAEQGAEFVSYDPVQGDWKFKVQHF 808 L +K +QGAEFVSYDP++G+WKF+V HF Sbjct: 964 LKRKAEDQGAEFVSYDPMKGEWKFRVNHF 992 >ref|XP_004148101.1| PREDICTED: nucleoporin nup189-like [Cucumis sativus] Length = 994 Score = 281 bits (720), Expect = 2e-73 Identities = 146/274 (53%), Positives = 186/274 (67%), Gaps = 5/274 (1%) Frame = +2 Query: 2 ENPRSLVIGPTEEWNLMANFENSSVAKNTSIHVYENGNVSVNVSAPGVDGSLYQNKDGNS 181 ENPR+LVI PT++W N + S +K+TS+ ENGNV N Sbjct: 737 ENPRALVIRPTDQWPSKGNLDKSLPSKDTSVR--ENGNVVEN------------------ 776 Query: 182 DQTSTSKDSAASAEHSHKPDGVHDDHLAPKGDSAIVDELTLKITYSFSSMG-----FSGG 346 TSK++ + + KP+GVH+DH APK D L T++ G + G Sbjct: 777 ---GTSKENIHLNKVNQKPNGVHEDHSAPKED--------LYRTFAGHRAGEAAIVYEHG 825 Query: 347 VDVMKLMPKIRHTDYYIEPRIEELAVKEISESGFCSNVKDFVVGWLGYGNIKFLGETDVR 526 D+ LMPK+ H+DYY EP+I+ELA KE +E GFC +VKDFVVG GYG+IKF GETDVR Sbjct: 826 ADIEALMPKLLHSDYYTEPKIQELAAKERAEPGFCRHVKDFVVGRHGYGSIKFFGETDVR 885 Query: 527 ELDIESHVQFNDREVVVYMDETKKPLVGQGLNKPAEITLCNIKCIDKKTGKQYIDGPKVD 706 LD+ES VQFN+REV+VY+DE+KKP GQGLNKPAE+T+ NIKC+DK+TG QY +GPKV+ Sbjct: 886 RLDLESIVQFNNREVIVYLDESKKPPCGQGLNKPAEVTILNIKCVDKQTGHQYTEGPKVE 945 Query: 707 MYKEMLMKKTAEQGAEFVSYDPVQGDWKFKVQHF 808 YKE+L KKT QGAEFVSYDPV+G+WKF+V+HF Sbjct: 946 KYKELLRKKTEAQGAEFVSYDPVKGEWKFRVEHF 979 >ref|XP_002317654.1| predicted protein [Populus trichocarpa] gi|222860719|gb|EEE98266.1| predicted protein [Populus trichocarpa] Length = 1007 Score = 281 bits (718), Expect = 3e-73 Identities = 145/270 (53%), Positives = 191/270 (70%), Gaps = 1/270 (0%) Frame = +2 Query: 2 ENPRSLVIGPTEEWNLMANFENSSVAKNTSIHVYENGNVSVNVSAPGVDGSLYQNKDGNS 181 ENPR+LVI P ++W A+ E +S N S V+ENG S + A +G +K+ N Sbjct: 723 ENPRALVIRPMDQWPSRASAEKASPV-NASAPVHENGKNSESDFANLSNGYTAGDKNKNL 781 Query: 182 DQTSTSKDSAASAEHSHKPDGVHDDHLAPKGDSAIVDELTLK-ITYSFSSMGFSGGVDVM 358 + K+ A + + KP+GVH+DH A K +S +TL +++ + G D+ Sbjct: 782 AENGVIKEQAPHVKVNQKPNGVHEDHSAQKEESY----MTLSGHRAGEAAIVYEHGADIE 837 Query: 359 KLMPKIRHTDYYIEPRIEELAVKEISESGFCSNVKDFVVGWLGYGNIKFLGETDVRELDI 538 LMPK+R +DY+ EPRI+ELA KE ++ GFC +VKDFVVG GYG+IKF GETDVR LD+ Sbjct: 838 ALMPKLRRSDYFTEPRIQELAAKERAKPGFCRHVKDFVVGRHGYGSIKFSGETDVRRLDL 897 Query: 539 ESHVQFNDREVVVYMDETKKPLVGQGLNKPAEITLCNIKCIDKKTGKQYIDGPKVDMYKE 718 ES VQFN+REV+VYMD++KKP VGQGLNKPAE+TL NIKC DKKTG+Q+ +GPK++ YKE Sbjct: 898 ESLVQFNNREVIVYMDDSKKPPVGQGLNKPAEVTLLNIKCFDKKTGRQFTEGPKIEKYKE 957 Query: 719 MLMKKTAEQGAEFVSYDPVQGDWKFKVQHF 808 ML +K +QGAEFVSYDPV+G+WKFKV HF Sbjct: 958 MLKRKAEDQGAEFVSYDPVKGEWKFKVNHF 987