BLASTX nr result

ID: Panax21_contig00021146 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00021146
         (493 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265027.2| PREDICTED: A/G-specific adenine DNA glycosyl...   125   5e-27
emb|CBI25679.3| unnamed protein product [Vitis vinifera]              125   5e-27
emb|CAN71629.1| hypothetical protein VITISV_015579 [Vitis vinifera]   125   5e-27
ref|XP_002321221.1| predicted protein [Populus trichocarpa] gi|2...   122   4e-26
ref|XP_003528811.1| PREDICTED: A/G-specific adenine DNA glycosyl...   115   4e-24

>ref|XP_002265027.2| PREDICTED: A/G-specific adenine DNA glycosylase [Vitis vinifera]
          Length = 464

 Score =  125 bits (313), Expect = 5e-27
 Identities = 70/133 (52%), Positives = 84/133 (63%), Gaps = 4/133 (3%)
 Frame = -2

Query: 387 GANDKKKRQRGMREAKPKTTYQVEEGCCTVIRDIEDFNIGRDEIFKIRASLLDWYENNQR 208
           G+ D K++    R+ K +TT ++E      + DIEDF  GRDE  KIRASLL WY+ N+R
Sbjct: 10  GSRDNKEK----RKRKQRTTSEIE------VMDIEDF--GRDETLKIRASLLGWYDLNKR 57

Query: 207 DLPWXXXXXXXXXXXXXXXXXXXR----AYAVWVSEIMLQQTRVQTVIDYFNRWMHKWPT 40
           +LPW                        AYAVWVSE+MLQQTRV+TVIDY+NRWM KWPT
Sbjct: 58  NLPWRTPTTTTTHEDEDDADAHEDLDNRAYAVWVSEVMLQQTRVETVIDYYNRWMQKWPT 117

Query: 39  LLHLSQASLEEVN 1
           L HLS ASLEEVN
Sbjct: 118 LHHLSLASLEEVN 130


>emb|CBI25679.3| unnamed protein product [Vitis vinifera]
          Length = 506

 Score =  125 bits (313), Expect = 5e-27
 Identities = 70/133 (52%), Positives = 84/133 (63%), Gaps = 4/133 (3%)
 Frame = -2

Query: 387 GANDKKKRQRGMREAKPKTTYQVEEGCCTVIRDIEDFNIGRDEIFKIRASLLDWYENNQR 208
           G+ D K++    R+ K +TT ++E      + DIEDF  GRDE  KIRASLL WY+ N+R
Sbjct: 52  GSRDNKEK----RKRKQRTTSEIE------VMDIEDF--GRDETLKIRASLLGWYDLNKR 99

Query: 207 DLPWXXXXXXXXXXXXXXXXXXXR----AYAVWVSEIMLQQTRVQTVIDYFNRWMHKWPT 40
           +LPW                        AYAVWVSE+MLQQTRV+TVIDY+NRWM KWPT
Sbjct: 100 NLPWRTPTTTTTHEDEDDADAHEDLDNRAYAVWVSEVMLQQTRVETVIDYYNRWMQKWPT 159

Query: 39  LLHLSQASLEEVN 1
           L HLS ASLEEVN
Sbjct: 160 LHHLSLASLEEVN 172


>emb|CAN71629.1| hypothetical protein VITISV_015579 [Vitis vinifera]
          Length = 1031

 Score =  125 bits (313), Expect = 5e-27
 Identities = 70/133 (52%), Positives = 84/133 (63%), Gaps = 4/133 (3%)
 Frame = -2

Query: 387 GANDKKKRQRGMREAKPKTTYQVEEGCCTVIRDIEDFNIGRDEIFKIRASLLDWYENNQR 208
           G+ D K++    R+ K +TT ++E      + DIEDF  GRDE  KIRASLL WY+ N+R
Sbjct: 555 GSRDNKEK----RKRKQRTTSEIE------VMDIEDF--GRDETLKIRASLLGWYDLNKR 602

Query: 207 DLPWXXXXXXXXXXXXXXXXXXXR----AYAVWVSEIMLQQTRVQTVIDYFNRWMHKWPT 40
           +LPW                        AYAVWVSE+MLQQTRV+TVIDY+NRWM KWPT
Sbjct: 603 NLPWRTPTTTTTHEDEDDADAHEDLDNRAYAVWVSEVMLQQTRVETVIDYYNRWMQKWPT 662

Query: 39  LLHLSQASLEEVN 1
           L HLS ASLEEVN
Sbjct: 663 LHHLSLASLEEVN 675


>ref|XP_002321221.1| predicted protein [Populus trichocarpa] gi|222861994|gb|EEE99536.1|
           predicted protein [Populus trichocarpa]
          Length = 480

 Score =  122 bits (305), Expect = 4e-26
 Identities = 70/132 (53%), Positives = 78/132 (59%), Gaps = 3/132 (2%)
 Frame = -2

Query: 387 GANDKKKRQRGMREAKPKTTYQVEEGCCTVIRDIEDFNIGRDEIFKIRASLLDWYENNQR 208
           G     KR+R    AKPK   Q       V+ DIED      E  KIRASLL+WY++NQR
Sbjct: 5   GIEKPSKRKRNAAIAKPKEQRQ-HSSKKQVVADIEDL-FSDKETQKIRASLLEWYDHNQR 62

Query: 207 DLPWXXXXXXXXXXXXXXXXXXXR---AYAVWVSEIMLQQTRVQTVIDYFNRWMHKWPTL 37
           DLPW                       AY VWVSE+MLQQTRVQTVIDY+NRWM KWPTL
Sbjct: 63  DLPWRRITQTKETPFKEEEEEEEEERRAYGVWVSEVMLQQTRVQTVIDYYNRWMLKWPTL 122

Query: 36  LHLSQASLEEVN 1
            HL+QASLEEVN
Sbjct: 123 HHLAQASLEEVN 134


>ref|XP_003528811.1| PREDICTED: A/G-specific adenine DNA glycosylase-like [Glycine max]
          Length = 471

 Score =  115 bits (288), Expect = 4e-24
 Identities = 60/128 (46%), Positives = 77/128 (60%), Gaps = 1/128 (0%)
 Frame = -2

Query: 381 NDKKKRQRGMREAKPKTTYQVEEGCCTVIRDIED-FNIGRDEIFKIRASLLDWYENNQRD 205
           ++KKK++   R +        +      + DIED  +  +DE  K+R +LLDWY+ N+RD
Sbjct: 16  SEKKKKKNSTRRSVVVVGESKKPQPLVEVEDIEDSLSFSKDETHKLRVALLDWYDLNRRD 75

Query: 204 LPWXXXXXXXXXXXXXXXXXXXRAYAVWVSEIMLQQTRVQTVIDYFNRWMHKWPTLLHLS 25
           LPW                    AY VWVSE+MLQQTRVQTVI Y+NRWM KWPT+ HL+
Sbjct: 76  LPWRTTFKQEDEEVERR------AYGVWVSEVMLQQTRVQTVIAYYNRWMQKWPTIHHLA 129

Query: 24  QASLEEVN 1
           QASLEEVN
Sbjct: 130 QASLEEVN 137


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