BLASTX nr result

ID: Panax21_contig00021141 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00021141
         (637 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD73296.1| unknown [Panax ginseng]                                158   7e-37
ref|XP_002330611.1| predicted protein [Populus trichocarpa] gi|2...   119   5e-25
ref|XP_002330609.1| predicted protein [Populus trichocarpa] gi|2...   118   1e-24
ref|XP_002330608.1| predicted protein [Populus trichocarpa] gi|2...   118   1e-24
ref|XP_002299045.1| predicted protein [Populus trichocarpa] gi|2...   117   2e-24

>gb|ABD73296.1| unknown [Panax ginseng]
          Length = 153

 Score =  158 bits (400), Expect = 7e-37
 Identities = 71/108 (65%), Positives = 87/108 (80%)
 Frame = +2

Query: 2   GTLYMVYARIHWVGNTTHKLEWIKSLHSYLTPYVSNNPRRAYSNYDDLDLGVNDPKGTTT 181
           GTL+M+Y+ + WVGNTT KLEWI+SLH YLTPYVS+NPRRAY NYDD+DLGVN   G  +
Sbjct: 47  GTLFMIYSSVLWVGNTTQKLEWIRSLHEYLTPYVSSNPRRAYWNYDDIDLGVNSGSGIIS 106

Query: 182 PEEAKKTWGKMYFKNNFERLVQAKTFIDPDNFFRHEQSIPPLSLKADM 325
              A+K WG+ YF NNF++L++ KT +DP NFFRHEQSIPP SL +DM
Sbjct: 107 NIRARK-WGRSYFNNNFDKLIRVKTLVDPLNFFRHEQSIPPFSLFSDM 153


>ref|XP_002330611.1| predicted protein [Populus trichocarpa] gi|222872169|gb|EEF09300.1|
           predicted protein [Populus trichocarpa]
          Length = 501

 Score =  119 bits (298), Expect = 5e-25
 Identities = 57/107 (53%), Positives = 76/107 (71%), Gaps = 4/107 (3%)
 Frame = +2

Query: 2   GTLYMVYARIHWV--GNTTHK--LEWIKSLHSYLTPYVSNNPRRAYSNYDDLDLGVNDPK 169
           G +Y +  ++ W   G    K  ++WI+ L+SY+TPYVS NPR AY NY DLD+G+N   
Sbjct: 396 GNIYKIEHQVSWSEEGKEASKRHVDWIRRLYSYMTPYVSKNPREAYINYRDLDIGMNSLA 455

Query: 170 GTTTPEEAKKTWGKMYFKNNFERLVQAKTFIDPDNFFRHEQSIPPLS 310
           G T+ E+A   WG+ YFKNNF++LV+ KT +DP NFFR+EQSIPPLS
Sbjct: 456 GNTSYEQAS-IWGRKYFKNNFDKLVRVKTAVDPANFFRNEQSIPPLS 501


>ref|XP_002330609.1| predicted protein [Populus trichocarpa] gi|222872167|gb|EEF09298.1|
           predicted protein [Populus trichocarpa]
          Length = 534

 Score =  118 bits (295), Expect = 1e-24
 Identities = 55/107 (51%), Positives = 74/107 (69%), Gaps = 4/107 (3%)
 Frame = +2

Query: 2   GTLYMVYARIHWVGN----TTHKLEWIKSLHSYLTPYVSNNPRRAYSNYDDLDLGVNDPK 169
           G LY ++  + W       +   + WI+ L+SY+TPYVS NPR AY NY DLDLG+N+  
Sbjct: 427 GNLYKIHYYVAWTEEGKEASERHISWIRRLYSYMTPYVSKNPREAYVNYRDLDLGINNLA 486

Query: 170 GTTTPEEAKKTWGKMYFKNNFERLVQAKTFIDPDNFFRHEQSIPPLS 310
           G T+ ++A   WG+ YFKNNF++LV+ KT +DP NFFR+EQSIPP S
Sbjct: 487 GNTSYKQA-SIWGRKYFKNNFDKLVRIKTEVDPANFFRNEQSIPPFS 532


>ref|XP_002330608.1| predicted protein [Populus trichocarpa] gi|222872166|gb|EEF09297.1|
           predicted protein [Populus trichocarpa]
          Length = 535

 Score =  118 bits (295), Expect = 1e-24
 Identities = 56/107 (52%), Positives = 74/107 (69%), Gaps = 4/107 (3%)
 Frame = +2

Query: 2   GTLYMVYARIHWVGN----TTHKLEWIKSLHSYLTPYVSNNPRRAYSNYDDLDLGVNDPK 169
           G LY +   + W       +   + WI+ L+SY  PYVS NPR AY NY DLD+G+N+ +
Sbjct: 429 GNLYKIQYLLLWNEQGKEASMRHIAWIRRLYSYTAPYVSKNPREAYINYRDLDVGMNNIQ 488

Query: 170 GTTTPEEAKKTWGKMYFKNNFERLVQAKTFIDPDNFFRHEQSIPPLS 310
           G T+ ++A   WG+ YFKNNF+RL+Q KT +DPDNFFR+EQSIPPLS
Sbjct: 489 GNTSYKQAS-IWGRKYFKNNFDRLIQVKTAVDPDNFFRNEQSIPPLS 534


>ref|XP_002299045.1| predicted protein [Populus trichocarpa] gi|222846303|gb|EEE83850.1|
           predicted protein [Populus trichocarpa]
          Length = 533

 Score =  117 bits (293), Expect = 2e-24
 Identities = 57/107 (53%), Positives = 75/107 (70%), Gaps = 4/107 (3%)
 Frame = +2

Query: 2   GTLYMVYARIHWVGNTTHK----LEWIKSLHSYLTPYVSNNPRRAYSNYDDLDLGVNDPK 169
           G LY++ + + W   +       + WI+ L+SYLT YVS NPR AY NY DLDLG+N+  
Sbjct: 426 GNLYVLVSSVSWREESKEASRRHMAWIRRLYSYLTKYVSKNPREAYVNYRDLDLGINNLT 485

Query: 170 GTTTPEEAKKTWGKMYFKNNFERLVQAKTFIDPDNFFRHEQSIPPLS 310
           GTT+ ++A   WG+ YFKNNF+RLV+ KT +DP NFFR+EQSIP LS
Sbjct: 486 GTTSYKQAS-IWGRKYFKNNFDRLVRVKTEVDPTNFFRNEQSIPSLS 531


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