BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00021140
         (751 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285325.1| PREDICTED: photosystem II core complex prote...   148   1e-33
gb|AFK46434.1| unknown [Lotus japonicus]                              144   3e-32
ref|XP_002515034.1| photosystem II core complex proteins psbY, c...   142   8e-32
ref|XP_003538579.1| PREDICTED: photosystem II core complex prote...   137   2e-30
ref|XP_002315645.1| hypothetical protein POPTRDRAFT_726168 [Popu...   137   2e-30

>ref|XP_002285325.1| PREDICTED: photosystem II core complex proteins psbY,
           chloroplastic-like [Vitis vinifera]
          Length = 201

 Score =  148 bits (373), Expect = 1e-33
 Identities = 105/204 (51%), Positives = 116/204 (56%), Gaps = 9/204 (4%)
 Frame = +2

Query: 107 LNAKCISSSSSPKPQLINNNLN-SKSTKLPISL---QNLPKPLTGL-----QLTTSSLAG 259
           LNAKC+S +S PK      NLN SK T  PISL   QNLPK LT L     Q  ++SLAG
Sbjct: 11  LNAKCLSINS-PK------NLNLSKPTAKPISLLSIQNLPKGLTTLKSSENQNLSTSLAG 63

Query: 260 TAIAGAIFSTLSSCDXXXXXXXXXXXXXGGDNRGXXXXXXXXXXXXWVLYNILQPALNQI 439
           TAIAGAIFSTLSSCD             G DNRG            WVL+NILQPALNQ+
Sbjct: 64  TAIAGAIFSTLSSCDPALAAQQIAEIADG-DNRGLALLLPIIPAIAWVLFNILQPALNQL 122

Query: 440 NKMANSKGVIIXXXXXXXXXXXXXXXXTPXXXXXXXXXXXXXXXXXXGSDNRGQLLLIVV 619
           NKM ++KGVII                TP                   SDNRGQLLL VV
Sbjct: 123 NKMRSTKGVII--GLGLGGLAASGFMLTP----HASASEIATLADAASSDNRGQLLLFVV 176

Query: 620 APAILWVLYNILQPALNQINKMKS 691
            PAILWVLYNILQPALNQ+N+M+S
Sbjct: 177 TPAILWVLYNILQPALNQLNRMRS 200


>gb|AFK46434.1| unknown [Lotus japonicus]
          Length = 205

 Score =  144 bits (362), Expect = 3e-32
 Identities = 91/200 (45%), Positives = 113/200 (56%), Gaps = 5/200 (2%)
 Frame = +2

Query: 107 LNAKCISSSSSPKPQLINNNLNSKST--KLPISLQNLPKPLTGLQ---LTTSSLAGTAIA 271
           +N+KC+++      +L+ N  N+K T  K  IS QNLPK L+  +   ++T+S+AGTAIA
Sbjct: 12  INSKCLNT------KLMINPTNTKLTTSKPTISFQNLPKGLSSAENTSISTTSMAGTAIA 65

Query: 272 GAIFSTLSSCDXXXXXXXXXXXXXGGDNRGXXXXXXXXXXXXWVLYNILQPALNQINKMA 451
           GAIFS+L SCD             G DNRG            WVL+NILQPALNQIN+M 
Sbjct: 66  GAIFSSLVSCDAAFAAQQIAEIAEG-DNRGLALLLPLIPAIVWVLFNILQPALNQINRMR 124

Query: 452 NSKGVIIXXXXXXXXXXXXXXXXTPXXXXXXXXXXXXXXXXXXGSDNRGQLLLIVVAPAI 631
           N+KGVI+                                    GSDNRGQLLL VVAPAI
Sbjct: 125 NTKGVIVGLGLGLGGLAAGSGMLWAPEASAGELGIIADAAAAGGSDNRGQLLLFVVAPAI 184

Query: 632 LWVLYNILQPALNQINKMKS 691
            WVL+NILQPALNQIN+M+S
Sbjct: 185 GWVLFNILQPALNQINRMRS 204


>ref|XP_002515034.1| photosystem II core complex proteins psbY, chloroplast precursor
           [Ricinus communis] gi|223546085|gb|EEF47588.1|
           photosystem II core complex proteins psbY, chloroplast
           precursor [Ricinus communis]
          Length = 195

 Score =  142 bits (358), Expect = 8e-32
 Identities = 96/200 (48%), Positives = 109/200 (54%), Gaps = 5/200 (2%)
 Frame = +2

Query: 107 LNAKCISSSSSPKPQLINNNLNSKSTKLPISL---QNLPKPLTGLQLTTSS--LAGTAIA 271
           LN KC+S+ +S K      N+N  +T  PISL   Q LPK LT  + T  +  LAGTAIA
Sbjct: 7   LNTKCLSNINSGK------NINKPTTTKPISLLSMQELPKGLTISKPTNENKLLAGTAIA 60

Query: 272 GAIFSTLSSCDXXXXXXXXXXXXXGGDNRGXXXXXXXXXXXXWVLYNILQPALNQINKMA 451
           GAIFSTLSSCD             G DNRG            WVL+NIL+PALNQIN+M 
Sbjct: 61  GAIFSTLSSCDPAFAAQQIAEIAEG-DNRGLALLLPIIPALGWVLFNILRPALNQINRMR 119

Query: 452 NSKGVIIXXXXXXXXXXXXXXXXTPXXXXXXXXXXXXXXXXXXGSDNRGQLLLIVVAPAI 631
            +KGVII                                     SDNRGQLLL VVAPAI
Sbjct: 120 ETKGVIIGLGLGGLAATGFM-----AAAPEASASENIAMIADAASDNRGQLLLFVVAPAI 174

Query: 632 LWVLYNILQPALNQINKMKS 691
           LWVLYNILQPALNQIN+M+S
Sbjct: 175 LWVLYNILQPALNQINRMRS 194


>ref|XP_003538579.1| PREDICTED: photosystem II core complex proteins psbY,
           chloroplastic-like [Glycine max]
          Length = 197

 Score =  137 bits (345), Expect = 2e-30
 Identities = 90/196 (45%), Positives = 109/196 (55%), Gaps = 1/196 (0%)
 Frame = +2

Query: 107 LNAKCISSSSSPKPQLINNNLN-SKSTKLPISLQNLPKPLTGLQLTTSSLAGTAIAGAIF 283
           +N+KCI+++ S   +L N  L  SK T    SLQNLPK LT     ++S AGTAIAGAIF
Sbjct: 12  INSKCINTTGSSH-KLHNPKLPPSKPTLSLFSLQNLPKGLTSH--VSTSTAGTAIAGAIF 68

Query: 284 STLSSCDXXXXXXXXXXXXXGGDNRGXXXXXXXXXXXXWVLYNILQPALNQINKMANSKG 463
           S+L++CD             G DNRG            WVL+NILQPALNQ+N+M NSKG
Sbjct: 69  SSLANCDAALAASQIAELAEG-DNRGLALLLPLIPAIAWVLFNILQPALNQLNRMRNSKG 127

Query: 464 VIIXXXXXXXXXXXXXXXXTPXXXXXXXXXXXXXXXXXXGSDNRGQLLLIVVAPAILWVL 643
           VI+                                     SDNRGQLLL VV PAI+WVL
Sbjct: 128 VIVGLGLGLCASGMMSGPEA-------SASEIAMIADAAASDNRGQLLLFVVTPAIVWVL 180

Query: 644 YNILQPALNQINKMKS 691
           YNILQPALNQ+N+M+S
Sbjct: 181 YNILQPALNQLNRMRS 196


>ref|XP_002315645.1| hypothetical protein POPTRDRAFT_726168 [Populus trichocarpa]
           gi|118489255|gb|ABK96433.1| unknown [Populus trichocarpa
           x Populus deltoides] gi|222864685|gb|EEF01816.1|
           hypothetical protein POPTRDRAFT_726168 [Populus
           trichocarpa]
          Length = 196

 Score =  137 bits (345), Expect = 2e-30
 Identities = 97/202 (48%), Positives = 108/202 (53%), Gaps = 7/202 (3%)
 Frame = +2

Query: 107 LNAKCISSSSSPKPQLINNNLNSKSTK---LPISL---QNLPKPLT-GLQLTTSSLAGTA 265
           LNAKC+S         IN+N N   TK    P+SL   QNLPK LT       + L GTA
Sbjct: 11  LNAKCLS---------INSNKNISPTKPSTKPVSLLSMQNLPKGLTISKPADNTVLTGTA 61

Query: 266 IAGAIFSTLSSCDXXXXXXXXXXXXXGGDNRGXXXXXXXXXXXXWVLYNILQPALNQINK 445
           IAGAIF+TLSSC+             G DNRG            WVL+NILQPALNQIN+
Sbjct: 62  IAGAIFTTLSSCEPAFAAQQIAEIAEG-DNRGLALLLPLIPAIAWVLFNILQPALNQINR 120

Query: 446 MANSKGVIIXXXXXXXXXXXXXXXXTPXXXXXXXXXXXXXXXXXXGSDNRGQLLLIVVAP 625
           M  +KGVI+                TP                   SDNRG LLLIVVAP
Sbjct: 121 MRQTKGVIV--GLGLGGLAASGFISTPHASASEIAMIADAT-----SDNRGTLLLIVVAP 173

Query: 626 AILWVLYNILQPALNQINKMKS 691
           AILWVLYNILQPALNQINKM+S
Sbjct: 174 AILWVLYNILQPALNQINKMRS 195