BLASTX nr result

ID: Panax21_contig00021134 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00021134
         (1279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519213.1| DELLA protein RGL1, putative [Ricinus commun...    72   5e-17
ref|XP_002523464.1| DELLA protein GAI1, putative [Ricinus commun...    66   3e-16
ref|XP_003594754.1| DELLA protein GAI [Medicago truncatula] gi|1...    71   9e-16
ref|XP_002519214.1| DELLA protein RGL2, putative [Ricinus commun...    67   1e-15
ref|XP_003594755.1| DELLA protein RGL2 [Medicago truncatula] gi|...    70   9e-15

>ref|XP_002519213.1| DELLA protein RGL1, putative [Ricinus communis]
           gi|223541528|gb|EEF43077.1| DELLA protein RGL1, putative
           [Ricinus communis]
          Length = 562

 Score = 72.4 bits (176), Expect(2) = 5e-17
 Identities = 38/61 (62%), Positives = 44/61 (72%), Gaps = 2/61 (3%)
 Frame = -2

Query: 294 RIRKDNTTISVWKAFFARFGMVEKELSMSSLYQVSLVLKNFACGSSCTLDRDGSSYR--W 121
           RIR  +  I VW++FFARFGM++ ELS SSLYQ SLVLK F CGSSCTLD +  S    W
Sbjct: 491 RIR--HVKIDVWRSFFARFGMIQTELSTSSLYQASLVLKKFPCGSSCTLDVNEKSLNISW 548

Query: 120 K 118
           K
Sbjct: 549 K 549



 Score = 42.7 bits (99), Expect(2) = 5e-17
 Identities = 19/35 (54%), Positives = 28/35 (80%)
 Frame = -3

Query: 377 CMDRENPNRLILESMYFN*CIKTIVATEG*ERTIR 273
           CM+R++PNR+  ES++F+  I+ IVA+EG ER IR
Sbjct: 459 CMERDDPNRMAAESVFFHHGIRNIVASEGEERRIR 493


>ref|XP_002523464.1| DELLA protein GAI1, putative [Ricinus communis]
           gi|223537292|gb|EEF38923.1| DELLA protein GAI1, putative
           [Ricinus communis]
          Length = 594

 Score = 66.2 bits (160), Expect(2) = 3e-16
 Identities = 29/50 (58%), Positives = 38/50 (76%)
 Frame = -2

Query: 279 NTTISVWKAFFARFGMVEKELSMSSLYQVSLVLKNFACGSSCTLDRDGSS 130
           N  +  W+AFFARFGMVE +LS S+L Q +L++K FACG+  TLDR+G S
Sbjct: 516 NVKLDAWRAFFARFGMVETDLSSSALLQANLIVKKFACGNCFTLDRNGKS 565



 Score = 46.2 bits (108), Expect(2) = 3e-16
 Identities = 21/35 (60%), Positives = 27/35 (77%)
 Frame = -3

Query: 377 CMDRENPNRLILESMYFN*CIKTIVATEG*ERTIR 273
           CM+R + NR+I+ESMYF   IK ++ATEG ER IR
Sbjct: 481 CMERNDKNRMIMESMYFGIGIKNMIATEGEERVIR 515


>ref|XP_003594754.1| DELLA protein GAI [Medicago truncatula] gi|124359962|gb|ABN07978.1|
           GRAS transcription factor [Medicago truncatula]
           gi|355483802|gb|AES65005.1| DELLA protein GAI [Medicago
           truncatula]
          Length = 587

 Score = 70.9 bits (172), Expect(2) = 9e-16
 Identities = 32/48 (66%), Positives = 35/48 (72%)
 Frame = -2

Query: 279 NTTISVWKAFFARFGMVEKELSMSSLYQVSLVLKNFACGSSCTLDRDG 136
           N  I VW+AFF RFGMVE ELSM SLYQ  LV K FACG +CT D +G
Sbjct: 519 NVKIDVWRAFFTRFGMVETELSMKSLYQAELVAKRFACGYACTFDMNG 566



 Score = 40.0 bits (92), Expect(2) = 9e-16
 Identities = 21/37 (56%), Positives = 24/37 (64%)
 Frame = -3

Query: 383 EDCMDRENPNRLILESMYFN*CIKTIVATEG*ERTIR 273
           E CM  +  NR ILESMYF+  I+ IVA EG ER  R
Sbjct: 482 ETCMKGDEKNRFILESMYFSHGIRNIVAEEGAERKSR 518


>ref|XP_002519214.1| DELLA protein RGL2, putative [Ricinus communis]
           gi|223541529|gb|EEF43078.1| DELLA protein RGL2, putative
           [Ricinus communis]
          Length = 576

 Score = 66.6 bits (161), Expect(2) = 1e-15
 Identities = 29/50 (58%), Positives = 35/50 (70%)
 Frame = -2

Query: 279 NTTISVWKAFFARFGMVEKELSMSSLYQVSLVLKNFACGSSCTLDRDGSS 130
           N  +  W+AFF RFGM+E ELS SSL Q  L+ K FACG++CTL  DG S
Sbjct: 508 NAKLDAWRAFFTRFGMLETELSTSSLCQAKLIAKKFACGNACTLSMDGKS 557



 Score = 43.5 bits (101), Expect(2) = 1e-15
 Identities = 23/39 (58%), Positives = 29/39 (74%)
 Frame = -3

Query: 383 EDCMDRENPNRLILESMYFN*CIKTIVATEG*ERTIRQS 267
           E CM ++N NR+ILES++F   IK IVATEG ER IR +
Sbjct: 472 ESCM-KDNSNRMILESLHFGEGIKNIVATEGKERKIRNA 509


>ref|XP_003594755.1| DELLA protein RGL2 [Medicago truncatula]
           gi|124359963|gb|ABN07979.1| GRAS transcription factor
           [Medicago truncatula] gi|355483803|gb|AES65006.1| DELLA
           protein RGL2 [Medicago truncatula]
          Length = 586

 Score = 70.1 bits (170), Expect(2) = 9e-15
 Identities = 32/48 (66%), Positives = 35/48 (72%)
 Frame = -2

Query: 279 NTTISVWKAFFARFGMVEKELSMSSLYQVSLVLKNFACGSSCTLDRDG 136
           N  I VW+AFFARFGMVE ELSM SLYQ  L+ K F CG SCT D +G
Sbjct: 518 NVKIDVWRAFFARFGMVETELSMMSLYQAELMAKRFPCGISCTFDMNG 565



 Score = 37.4 bits (85), Expect(2) = 9e-15
 Identities = 20/37 (54%), Positives = 26/37 (70%)
 Frame = -3

Query: 383 EDCMDRENPNRLILESMYFN*CIKTIVATEG*ERTIR 273
           EDCM +++ NR+ILES YF   I+ +VA EG ER  R
Sbjct: 482 EDCM-KDDENRMILESKYFGHGIRNMVAEEGAERKSR 517


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