BLASTX nr result
ID: Panax21_contig00021116
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00021116 (351 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI34688.3| unnamed protein product [Vitis vinifera] 113 1e-23 ref|XP_002269627.2| PREDICTED: RNA-binding protein NOB1-like [Vi... 111 7e-23 emb|CAN66411.1| hypothetical protein VITISV_020978 [Vitis vinifera] 108 5e-22 ref|XP_004159959.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding ... 104 9e-21 ref|XP_004143919.1| PREDICTED: RNA-binding protein NOB1-like [Cu... 104 9e-21 >emb|CBI34688.3| unnamed protein product [Vitis vinifera] Length = 560 Score = 113 bits (283), Expect = 1e-23 Identities = 64/117 (54%), Positives = 77/117 (65%), Gaps = 1/117 (0%) Frame = -2 Query: 350 IFPISTMEPAPAPCWSNVVK-QXXXXPNQHQNGQAAAFVADRVFVGNCKSTKGXXXXXXX 174 +F +S P+ APCWSN+VK Q P+ HQ A + + VG+CKS+KG Sbjct: 9 LFFLSLEPPSQAPCWSNIVKAQPPPKPHHHQQ----ALIPPNLPVGSCKSSKGISIAVVD 64 Query: 173 XXAIIQGGENLHNRADKFVSVSEVIDEVRDPRSRHSFNLLPFSVDTMEPSSDSLKKV 3 AIIQGGE L ADKFVSVSEVIDEVRDP SRH +PF++DTMEPS +SLKKV Sbjct: 65 ATAIIQGGEQLTRCADKFVSVSEVIDEVRDPVSRHKLAFVPFTIDTMEPSPESLKKV 121 >ref|XP_002269627.2| PREDICTED: RNA-binding protein NOB1-like [Vitis vinifera] Length = 633 Score = 111 bits (277), Expect = 7e-23 Identities = 62/109 (56%), Positives = 73/109 (66%), Gaps = 1/109 (0%) Frame = -2 Query: 326 PAPAPCWSNVVK-QXXXXPNQHQNGQAAAFVADRVFVGNCKSTKGXXXXXXXXXAIIQGG 150 P+ APCWSN+VK Q P+ HQ A + + VG+CKS+KG AIIQGG Sbjct: 5 PSQAPCWSNIVKAQPPPKPHHHQQ----ALIPPNLPVGSCKSSKGISIAVVDATAIIQGG 60 Query: 149 ENLHNRADKFVSVSEVIDEVRDPRSRHSFNLLPFSVDTMEPSSDSLKKV 3 E L ADKFVSVSEVIDEVRDP SRH +PF++DTMEPS +SLKKV Sbjct: 61 EQLTRCADKFVSVSEVIDEVRDPVSRHKLAFVPFTIDTMEPSPESLKKV 109 >emb|CAN66411.1| hypothetical protein VITISV_020978 [Vitis vinifera] Length = 621 Score = 108 bits (270), Expect = 5e-22 Identities = 61/109 (55%), Positives = 72/109 (66%), Gaps = 1/109 (0%) Frame = -2 Query: 326 PAPAPCWSNVVK-QXXXXPNQHQNGQAAAFVADRVFVGNCKSTKGXXXXXXXXXAIIQGG 150 P+ APCWSN+VK Q P+ HQ A + + VG+CKS+KG AIIQGG Sbjct: 5 PSQAPCWSNIVKAQPPPKPHXHQQ----ALIPPNLPVGSCKSSKGISIAVVDATAIIQGG 60 Query: 149 ENLHNRADKFVSVSEVIDEVRDPRSRHSFNLLPFSVDTMEPSSDSLKKV 3 E L ADKFVSVSEVIDEVRDP S H +PF++DTMEPS +SLKKV Sbjct: 61 EQLTRCADKFVSVSEVIDEVRDPVSXHKLAFVPFTIDTMEPSPESLKKV 109 >ref|XP_004159959.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein NOB1-like [Cucumis sativus] Length = 617 Score = 104 bits (259), Expect = 9e-21 Identities = 53/108 (49%), Positives = 70/108 (64%) Frame = -2 Query: 326 PAPAPCWSNVVKQXXXXPNQHQNGQAAAFVADRVFVGNCKSTKGXXXXXXXXXAIIQGGE 147 P+PA CWSNVVK QHQ ++ +VF +CKS+KG AIIQGG+ Sbjct: 4 PSPASCWSNVVKTQPAPKPQHQTPSSSV----QVFADSCKSSKGVAVAVVDANAIIQGGD 59 Query: 146 NLHNRADKFVSVSEVIDEVRDPRSRHSFNLLPFSVDTMEPSSDSLKKV 3 L + ADKFVSV EV+DE+RDP SRH +PF++++M+PS D+L KV Sbjct: 60 KLSSSADKFVSVPEVLDEIRDPVSRHRLAFVPFTLESMDPSPDALNKV 107 >ref|XP_004143919.1| PREDICTED: RNA-binding protein NOB1-like [Cucumis sativus] Length = 617 Score = 104 bits (259), Expect = 9e-21 Identities = 53/108 (49%), Positives = 70/108 (64%) Frame = -2 Query: 326 PAPAPCWSNVVKQXXXXPNQHQNGQAAAFVADRVFVGNCKSTKGXXXXXXXXXAIIQGGE 147 P+PA CWSNVVK QHQ ++ +VF +CKS+KG AIIQGG+ Sbjct: 4 PSPASCWSNVVKTQPAPKPQHQTPSSSV----QVFADSCKSSKGVAVAVVDANAIIQGGD 59 Query: 146 NLHNRADKFVSVSEVIDEVRDPRSRHSFNLLPFSVDTMEPSSDSLKKV 3 L + ADKFVSV EV+DE+RDP SRH +PF++++M+PS D+L KV Sbjct: 60 KLSSSADKFVSVPEVLDEIRDPVSRHRLAFVPFTLESMDPSPDALNKV 107