BLASTX nr result

ID: Panax21_contig00021100 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00021100
         (472 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAE17114.1| Cys2-His2 type zinc finger protein [Nicotiana ta...   142   2e-32
dbj|BAA05079.1| zinc-finger protein [Petunia x hybrida]               140   1e-31
gb|ADL36636.1| C2H2L domain class transcription factor [Malus x ...   139   2e-31
gb|ACJ84437.1| unknown [Medicago truncatula]                          139   3e-31
gb|AAQ54303.1| zinc finger protein PIF1 [Nicotiana benthamiana]       138   5e-31

>dbj|BAE17114.1| Cys2-His2 type zinc finger protein [Nicotiana tabacum]
          Length = 253

 Score =  142 bits (359), Expect = 2e-32
 Identities = 83/178 (46%), Positives = 90/178 (50%), Gaps = 21/178 (11%)
 Frame = -1

Query: 472 LCLIMLARGGNNNATTARIXXXXXXXXXXXXXXXSNLIHKCKVCNKAFGSYQALGGHKAS 293
           LCLIMLAR   +      +                 +++KC VC K FGSYQALGGHKAS
Sbjct: 55  LCLIMLARSDGSANQEQSLTPPPAPVMKIHAPPEEKMVYKCSVCGKGFGSYQALGGHKAS 114

Query: 292 HRKHAAGGAD-DHQSATITAA------------ANGGVRTHECSICHKCFPTGQALGGHK 152
           HRK  AGG   D QS T T               NG  +THECSICHKCFPTGQALGGHK
Sbjct: 115 HRKLVAGGGGGDDQSTTSTTTNATGTTSSANGNGNGSGKTHECSICHKCFPTGQALGGHK 174

Query: 151 RRHYXXXXXXXXXXXXXXXXXXXXSHRGG------FDLNLPALPVFWP--GFGEDEVE 2
           R HY                       G       FDLN+PALP FWP  GFGEDEVE
Sbjct: 175 RCHYDGGNSNASVSVSASVGVTSSEGVGSTVSHRDFDLNIPALPEFWPRFGFGEDEVE 232


>dbj|BAA05079.1| zinc-finger protein [Petunia x hybrida]
          Length = 253

 Score =  140 bits (352), Expect = 1e-31
 Identities = 85/178 (47%), Positives = 95/178 (53%), Gaps = 21/178 (11%)
 Frame = -1

Query: 472 LCLIMLAR--GGNNNATTARIXXXXXXXXXXXXXXXSNL----IHKCKVCNKAFGSYQAL 311
           LCLIMLAR  G  NN+ +                  + L    ++KC VC K FGSYQAL
Sbjct: 54  LCLIMLARSDGSVNNSRSLPPPPLPPSVPVTSQINATLLEQKNLYKCSVCGKGFGSYQAL 113

Query: 310 GGHKASHRKHAAGGADDHQSATIT--------AAANGGVRTHECSICHKCFPTGQALGGH 155
           GGHKASHRK  + G D+  + + T        A  NG  RTHECSICHKCFPTGQALGGH
Sbjct: 114 GGHKASHRKLVSMGGDEQSTTSTTTNVTGTSSANVNGNGRTHECSICHKCFPTGQALGGH 173

Query: 154 KRRHY-----XXXXXXXXXXXXXXXXXXXXSHRGGFDLNLPALPVFWPGF--GEDEVE 2
           KR HY                         SH   FDLN+PALP FWPGF  GEDEVE
Sbjct: 174 KRCHYDGGNGNGNGSVSVGVTSSEGVGSTISHHRDFDLNIPALPEFWPGFGSGEDEVE 231


>gb|ADL36636.1| C2H2L domain class transcription factor [Malus x domestica]
          Length = 246

 Score =  139 bits (350), Expect = 2e-31
 Identities = 80/164 (48%), Positives = 85/164 (51%), Gaps = 9/164 (5%)
 Frame = -1

Query: 472 LCLIMLARGGNNNATTARIXXXXXXXXXXXXXXXSNLIHKCKVCNKAFGSYQALGGHKAS 293
           LCLIMLARG     TT+                   L +KC VCNK F SYQALGGHKAS
Sbjct: 64  LCLIMLARGTTAAVTTSS-------SESPAQPPSGELSYKCSVCNKGFSSYQALGGHKAS 116

Query: 292 HRKH----AAGGADDHQSATITAAANGGVRTHECSICHKCFPTGQALGGHKRRHYXXXXX 125
           HRK     AA    DH  A  +A      RTHECSICHK FPTGQALGGHKR HY     
Sbjct: 117 HRKSDSSAAAAATVDHPIAAASAGPATSARTHECSICHKTFPTGQALGGHKRCHYDGGSA 176

Query: 124 XXXXXXXXXXXXXXXSHRG-----GFDLNLPALPVFWPGFGEDE 8
                            +      GFDLNLPALP FWPGFG D+
Sbjct: 177 VTTSEGGGAGASSHSQSQSHQSQRGFDLNLPALPEFWPGFGADK 220


>gb|ACJ84437.1| unknown [Medicago truncatula]
          Length = 232

 Score =  139 bits (349), Expect = 3e-31
 Identities = 84/165 (50%), Positives = 93/165 (56%), Gaps = 8/165 (4%)
 Frame = -1

Query: 472 LCLIMLARGGNNNATTARIXXXXXXXXXXXXXXXSNLIHKCKVCNKAFGSYQALGGHKAS 293
           LCLIMLARG  N      +                 L +KC VCNK F SYQALGGHKAS
Sbjct: 45  LCLIMLARGHTNRHDFNPLNPPPTTIDNNNNNT--KLSYKCSVCNKEFSSYQALGGHKAS 102

Query: 292 HRKHA-AGGADDH---QSATITAAAN---GGVRTHECSICHKCFPTGQALGGHKRRHY-X 137
           HRK++  GG DDH    SA  T+AAN   GGVR+HECSICH+ FPTGQALGGHKR HY  
Sbjct: 103 HRKNSVGGGGDDHPSTSSAATTSAANTNGGGVRSHECSICHRSFPTGQALGGHKRCHYEG 162

Query: 136 XXXXXXXXXXXXXXXXXXXSHRGGFDLNLPALPVFWPGFGEDEVE 2
                              SH+  FDLN+PA P F    GEDEVE
Sbjct: 163 VVGGGASAVTVSEGMGSTHSHQRDFDLNIPAFPEFANKVGEDEVE 207


>gb|AAQ54303.1| zinc finger protein PIF1 [Nicotiana benthamiana]
          Length = 253

 Score =  138 bits (347), Expect = 5e-31
 Identities = 82/178 (46%), Positives = 89/178 (50%), Gaps = 21/178 (11%)
 Frame = -1

Query: 472 LCLIMLARGGNNNATTARIXXXXXXXXXXXXXXXSNLIHKCKVCNKAFGSYQALGGHKAS 293
           LCLIMLAR   +      +                 +++KC VC K FGSYQALGGHKAS
Sbjct: 55  LCLIMLARSDGSANREQSLPPPPVPVMKIHAPPEEKMVYKCSVCGKGFGSYQALGGHKAS 114

Query: 292 HRK-HAAGGADDHQSATITAA------------ANGGVRTHECSICHKCFPTGQALGGHK 152
           HRK  A GG  D QS T T               NG  +THECSICHK FPTGQALGGHK
Sbjct: 115 HRKLVAGGGGGDDQSTTSTTTNATGTTSSANGNGNGSGKTHECSICHKRFPTGQALGGHK 174

Query: 151 RRHYXXXXXXXXXXXXXXXXXXXXSHRGG------FDLNLPALPVFWPGF--GEDEVE 2
           R HY                       G       FDLN+PALP FWPGF  GEDEVE
Sbjct: 175 RCHYDGGNSNGGVSVSASVGLTSSEGVGSTVSHRDFDLNIPALPEFWPGFGSGEDEVE 232


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