BLASTX nr result

ID: Panax21_contig00021098 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00021098
         (507 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528600.1| PREDICTED: pentatricopeptide repeat-containi...   136   2e-30
emb|CBI35582.3| unnamed protein product [Vitis vinifera]              135   3e-30
ref|XP_002313273.1| predicted protein [Populus trichocarpa] gi|2...   128   6e-28
ref|XP_004169216.1| PREDICTED: pentatricopeptide repeat-containi...   127   7e-28
ref|XP_004140275.1| PREDICTED: pentatricopeptide repeat-containi...   127   7e-28

>ref|XP_003528600.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 813

 Score =  136 bits (342), Expect = 2e-30
 Identities = 62/82 (75%), Positives = 70/82 (85%)
 Frame = -3

Query: 505 NIELGCWAAEHLFKLKPEHPGYYILLSNMYAEAGRWDDADRVRELMKSRGVKKNPGCSWV 326
           NIELG WAAEHLF+LKP+H GYYILLSNMYAEA RWD+A++VRELMKSRG KKNPGCSWV
Sbjct: 726 NIELGLWAAEHLFELKPQHCGYYILLSNMYAEAERWDEANKVRELMKSRGAKKNPGCSWV 785

Query: 325 QIRDQVHGFAVGERIEECDAFF 260
           Q+ D VH F VGE+I+  D  F
Sbjct: 786 QVGDLVHAFLVGEKIDSLDDDF 807


>emb|CBI35582.3| unnamed protein product [Vitis vinifera]
          Length = 638

 Score =  135 bits (341), Expect = 3e-30
 Identities = 60/79 (75%), Positives = 68/79 (86%)
 Frame = -3

Query: 505 NIELGCWAAEHLFKLKPEHPGYYILLSNMYAEAGRWDDADRVRELMKSRGVKKNPGCSWV 326
           N+EL  WAAEHLF+LKPEH GYY LLSNMYAE GRWD+A+R+RELMKSRGVKK+PGCSWV
Sbjct: 527 NLELAAWAAEHLFELKPEHSGYYTLLSNMYAETGRWDEANRIRELMKSRGVKKSPGCSWV 586

Query: 325 QIRDQVHGFAVGERIEECD 269
           QI +Q H F VGE+IE  D
Sbjct: 587 QIGEQAHAFVVGEKIEGLD 605


>ref|XP_002313273.1| predicted protein [Populus trichocarpa] gi|222849681|gb|EEE87228.1|
           predicted protein [Populus trichocarpa]
          Length = 680

 Score =  128 bits (321), Expect = 6e-28
 Identities = 57/79 (72%), Positives = 67/79 (84%)
 Frame = -3

Query: 502 IELGCWAAEHLFKLKPEHPGYYILLSNMYAEAGRWDDADRVRELMKSRGVKKNPGCSWVQ 323
           IEL  WAAEHLFKLKP+H GYY +LSNMYAEAG+WD+A++VR+LMKSRG KKNPGCSWVQ
Sbjct: 595 IELAHWAAEHLFKLKPQHSGYYSVLSNMYAEAGKWDEANQVRKLMKSRGAKKNPGCSWVQ 654

Query: 322 IRDQVHGFAVGERIEECDA 266
           I +QVH F  GER+   D+
Sbjct: 655 IDNQVHAFVAGERMMNVDS 673


>ref|XP_004169216.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 684

 Score =  127 bits (320), Expect = 7e-28
 Identities = 57/76 (75%), Positives = 66/76 (86%)
 Frame = -3

Query: 505 NIELGCWAAEHLFKLKPEHPGYYILLSNMYAEAGRWDDADRVRELMKSRGVKKNPGCSWV 326
           N+ELG  AAEHLF+LKP+H GYYILLSN+YAE GRWD+A+++RELMKSRG KKNPGCSWV
Sbjct: 597 NVELGRRAAEHLFELKPQHCGYYILLSNIYAETGRWDEANKIRELMKSRGAKKNPGCSWV 656

Query: 325 QIRDQVHGFAVGERIE 278
           QI DQVH F   ER+E
Sbjct: 657 QIYDQVHAFVAEERVE 672


>ref|XP_004140275.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 833

 Score =  127 bits (320), Expect = 7e-28
 Identities = 57/76 (75%), Positives = 66/76 (86%)
 Frame = -3

Query: 505 NIELGCWAAEHLFKLKPEHPGYYILLSNMYAEAGRWDDADRVRELMKSRGVKKNPGCSWV 326
           N+ELG  AAEHLF+LKP+H GYYILLSN+YAE GRWD+A+++RELMKSRG KKNPGCSWV
Sbjct: 746 NVELGRRAAEHLFELKPQHCGYYILLSNIYAETGRWDEANKIRELMKSRGAKKNPGCSWV 805

Query: 325 QIRDQVHGFAVGERIE 278
           QI DQVH F   ER+E
Sbjct: 806 QIYDQVHAFVAEERVE 821


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