BLASTX nr result

ID: Panax21_contig00021095 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00021095
         (415 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004145915.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   242   3e-62
emb|CBI24105.3| unnamed protein product [Vitis vinifera]              240   1e-61
ref|XP_002273212.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   240   1e-61
emb|CAN66431.1| hypothetical protein VITISV_041393 [Vitis vinifera]   240   1e-61
ref|XP_002513373.1| dead box ATP-dependent RNA helicase, putativ...   234   5e-60

>ref|XP_004145915.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 10-like [Cucumis
           sativus]
          Length = 449

 Score =  242 bits (617), Expect = 3e-62
 Identities = 116/137 (84%), Positives = 129/137 (94%)
 Frame = -3

Query: 413 EEDNEELRSFKDLGVCEQLVEACDNLGWKNPSKIQALVLPHALEGRDLIGLAQTGSGKTG 234
           E+DNEE+++F+ LG+CEQLVEACD+LGWKNPSKIQA  +PHALEG+DLIGLAQTGSGKTG
Sbjct: 2   EQDNEEVKTFQSLGICEQLVEACDSLGWKNPSKIQAEAIPHALEGKDLIGLAQTGSGKTG 61

Query: 233 AFALPILQSLLETPQAFFACVLSPTRELAIQIAEQFEALGSGIGVKCAVLVGGVDQVQQS 54
           AFALPILQ+LLE PQAFFACVLSPTRELAIQIAEQFEALGSGIG+KCAVLVGGVD VQQ+
Sbjct: 62  AFALPILQALLEAPQAFFACVLSPTRELAIQIAEQFEALGSGIGIKCAVLVGGVDMVQQA 121

Query: 53  IALGKRPHIVVATPGRL 3
           I L KRPH+VV TPGRL
Sbjct: 122 INLAKRPHVVVGTPGRL 138


>emb|CBI24105.3| unnamed protein product [Vitis vinifera]
          Length = 536

 Score =  240 bits (612), Expect = 1e-61
 Identities = 116/136 (85%), Positives = 127/136 (93%)
 Frame = -3

Query: 410 EDNEELRSFKDLGVCEQLVEACDNLGWKNPSKIQALVLPHALEGRDLIGLAQTGSGKTGA 231
           EDN+E++SFKDLG+CEQLVEAC+NLGWK PSKIQA  +PHALEG+DLIGLAQTGSGKTGA
Sbjct: 3   EDNKEVKSFKDLGICEQLVEACENLGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGA 62

Query: 230 FALPILQSLLETPQAFFACVLSPTRELAIQIAEQFEALGSGIGVKCAVLVGGVDQVQQSI 51
           FALPILQ+LL+TPQ  FACVLSPTRELAIQIAEQFEALGSGIG+KCAVLVGGVD  QQ+I
Sbjct: 63  FALPILQALLDTPQVLFACVLSPTRELAIQIAEQFEALGSGIGLKCAVLVGGVDHTQQAI 122

Query: 50  ALGKRPHIVVATPGRL 3
           AL KRPHIVV TPGRL
Sbjct: 123 ALAKRPHIVVGTPGRL 138


>ref|XP_002273212.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 10-like [Vitis
           vinifera]
          Length = 470

 Score =  240 bits (612), Expect = 1e-61
 Identities = 116/136 (85%), Positives = 127/136 (93%)
 Frame = -3

Query: 410 EDNEELRSFKDLGVCEQLVEACDNLGWKNPSKIQALVLPHALEGRDLIGLAQTGSGKTGA 231
           EDN+E++SFKDLG+CEQLVEAC+NLGWK PSKIQA  +PHALEG+DLIGLAQTGSGKTGA
Sbjct: 37  EDNKEVKSFKDLGICEQLVEACENLGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGA 96

Query: 230 FALPILQSLLETPQAFFACVLSPTRELAIQIAEQFEALGSGIGVKCAVLVGGVDQVQQSI 51
           FALPILQ+LL+TPQ  FACVLSPTRELAIQIAEQFEALGSGIG+KCAVLVGGVD  QQ+I
Sbjct: 97  FALPILQALLDTPQVLFACVLSPTRELAIQIAEQFEALGSGIGLKCAVLVGGVDHTQQAI 156

Query: 50  ALGKRPHIVVATPGRL 3
           AL KRPHIVV TPGRL
Sbjct: 157 ALAKRPHIVVGTPGRL 172


>emb|CAN66431.1| hypothetical protein VITISV_041393 [Vitis vinifera]
          Length = 199

 Score =  240 bits (612), Expect = 1e-61
 Identities = 116/136 (85%), Positives = 127/136 (93%)
 Frame = -3

Query: 410 EDNEELRSFKDLGVCEQLVEACDNLGWKNPSKIQALVLPHALEGRDLIGLAQTGSGKTGA 231
           EDN+E++SFKDLG+CEQLVEAC+NLGWK PSKIQA  +PHALEG+DLIGLAQTGSGKTGA
Sbjct: 3   EDNKEVKSFKDLGICEQLVEACENLGWKTPSKIQAEAIPHALEGKDLIGLAQTGSGKTGA 62

Query: 230 FALPILQSLLETPQAFFACVLSPTRELAIQIAEQFEALGSGIGVKCAVLVGGVDQVQQSI 51
           FALPILQ+LL+TPQ  FACVLSPTRELAIQIAEQFEALGSGIG+KCAVLVGGVD  QQ+I
Sbjct: 63  FALPILQALLDTPQVLFACVLSPTRELAIQIAEQFEALGSGIGLKCAVLVGGVDHTQQAI 122

Query: 50  ALGKRPHIVVATPGRL 3
           AL KRPHIVV TPGRL
Sbjct: 123 ALAKRPHIVVGTPGRL 138


>ref|XP_002513373.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223547281|gb|EEF48776.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 442

 Score =  234 bits (597), Expect = 5e-60
 Identities = 119/141 (84%), Positives = 129/141 (91%), Gaps = 4/141 (2%)
 Frame = -3

Query: 413 EEDNEELRSFKDLGVCEQLVEACDNLGWKNPSKIQALVLPHALEGRDLIGLAQTGSGKTG 234
           EE+ EE+++FK+LGVC+QLV ACDNLGWKNP+KIQ   +PHALEG+DLIGLAQTGSGKTG
Sbjct: 2   EEEKEEVKTFKELGVCDQLVTACDNLGWKNPTKIQIESIPHALEGKDLIGLAQTGSGKTG 61

Query: 233 AFALPILQSLLE----TPQAFFACVLSPTRELAIQIAEQFEALGSGIGVKCAVLVGGVDQ 66
           AFALPILQSLLE    + QAFFACVLSPTRELAIQIAEQFEALGS IGVKCAVLVGGVD 
Sbjct: 62  AFALPILQSLLEASEKSVQAFFACVLSPTRELAIQIAEQFEALGSDIGVKCAVLVGGVDM 121

Query: 65  VQQSIALGKRPHIVVATPGRL 3
           VQQSIALGKRPHIVVATPGRL
Sbjct: 122 VQQSIALGKRPHIVVATPGRL 142


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