BLASTX nr result

ID: Panax21_contig00021089 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00021089
         (509 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281078.1| PREDICTED: ribonuclease H2 subunit B [Vitis ...   259   2e-67
emb|CAN79021.1| hypothetical protein VITISV_009443 [Vitis vinifera]   259   2e-67
ref|XP_002517803.1| conserved hypothetical protein [Ricinus comm...   249   2e-64
ref|XP_004138774.1| PREDICTED: ribonuclease H2 subunit B-like [C...   237   6e-61
ref|XP_002333390.1| predicted protein [Populus trichocarpa] gi|2...   231   5e-59

>ref|XP_002281078.1| PREDICTED: ribonuclease H2 subunit B [Vitis vinifera]
           gi|296081827|emb|CBI20832.3| unnamed protein product
           [Vitis vinifera]
          Length = 277

 Score =  259 bits (661), Expect = 2e-67
 Identities = 120/156 (76%), Positives = 135/156 (86%)
 Frame = +1

Query: 40  KTTSYLLTNGVLQELHWFKQAYGSWFLGDYICEDGRLYAATPVDPVFILLPILEEARMKK 219
           K T YL  NG LQEL+WFKQ+YGSWFLGDY+CEDGRLY AT VDPVFI+LPI EEARMKK
Sbjct: 38  KATCYLFKNGTLQELNWFKQSYGSWFLGDYVCEDGRLYTATIVDPVFIMLPIFEEARMKK 97

Query: 220 EGDPGKFRQLDEIIFINGYPGYQHLSTIADKSMQVVCDFKEIGSTKFFRLNDSKVLAWLY 399
             DPGKFRQLDEI+F+N YPGYQHL  IA+  MQVVC+ KEIGS+KFFRL+DSKVLAWL 
Sbjct: 98  RDDPGKFRQLDEIMFVNSYPGYQHLIPIAENCMQVVCEIKEIGSSKFFRLDDSKVLAWLC 157

Query: 400 YKVHQLKQTIPTLDRNYAAQDEKDILADAVSILAEY 507
           YKVHQLKQ +PTLD+NYAA+D+KD L DA+SIL EY
Sbjct: 158 YKVHQLKQILPTLDKNYAARDKKDTLTDAISILGEY 193


>emb|CAN79021.1| hypothetical protein VITISV_009443 [Vitis vinifera]
          Length = 277

 Score =  259 bits (661), Expect = 2e-67
 Identities = 120/156 (76%), Positives = 135/156 (86%)
 Frame = +1

Query: 40  KTTSYLLTNGVLQELHWFKQAYGSWFLGDYICEDGRLYAATPVDPVFILLPILEEARMKK 219
           K T YL  NG LQEL+WFKQ+YGSWFLGDY+CEDGRLY AT VDPVFI+LPI EEARMKK
Sbjct: 38  KATCYLFKNGTLQELNWFKQSYGSWFLGDYVCEDGRLYTATIVDPVFIMLPIFEEARMKK 97

Query: 220 EGDPGKFRQLDEIIFINGYPGYQHLSTIADKSMQVVCDFKEIGSTKFFRLNDSKVLAWLY 399
             DPGKFRQLDEI+F+N YPGYQHL  IA+  MQVVC+ KEIGS+KFFRL+DSKVLAWL 
Sbjct: 98  RDDPGKFRQLDEIMFVNSYPGYQHLIPIAENCMQVVCEIKEIGSSKFFRLDDSKVLAWLC 157

Query: 400 YKVHQLKQTIPTLDRNYAAQDEKDILADAVSILAEY 507
           YKVHQLKQ +PTLD+NYAA+D+KD L DA+SIL EY
Sbjct: 158 YKVHQLKQILPTLDKNYAARDKKDTLTDAISILGEY 193


>ref|XP_002517803.1| conserved hypothetical protein [Ricinus communis]
           gi|223543075|gb|EEF44610.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 299

 Score =  249 bits (635), Expect = 2e-64
 Identities = 117/156 (75%), Positives = 134/156 (85%)
 Frame = +1

Query: 40  KTTSYLLTNGVLQELHWFKQAYGSWFLGDYICEDGRLYAATPVDPVFILLPILEEARMKK 219
           KTT YLL N +LQELHWFKQ+Y SWFLGDY+C+DG LY+ATPVDPVFILLPI EEARM+K
Sbjct: 61  KTTCYLLNNRMLQELHWFKQSYTSWFLGDYVCQDGCLYSATPVDPVFILLPIFEEARMRK 120

Query: 220 EGDPGKFRQLDEIIFINGYPGYQHLSTIADKSMQVVCDFKEIGSTKFFRLNDSKVLAWLY 399
             DPGKFRQLDEI+FINGYPGY++L  IA+  MQVVC+ KEIGS+KFFRLNDSKV AWL 
Sbjct: 121 GDDPGKFRQLDEILFINGYPGYRYLMPIAENCMQVVCEIKEIGSSKFFRLNDSKVFAWLL 180

Query: 400 YKVHQLKQTIPTLDRNYAAQDEKDILADAVSILAEY 507
            KV QLKQ + +LD+NYAAQDEK+ LADA+ IL EY
Sbjct: 181 CKVSQLKQAVSSLDKNYAAQDEKNTLADAIMILGEY 216


>ref|XP_004138774.1| PREDICTED: ribonuclease H2 subunit B-like [Cucumis sativus]
           gi|449499524|ref|XP_004160839.1| PREDICTED: ribonuclease
           H2 subunit B-like [Cucumis sativus]
          Length = 281

 Score =  237 bits (605), Expect = 6e-61
 Identities = 110/154 (71%), Positives = 133/154 (86%)
 Frame = +1

Query: 46  TSYLLTNGVLQELHWFKQAYGSWFLGDYICEDGRLYAATPVDPVFILLPILEEARMKKEG 225
           T +L  N +L+E+HWFKQ+Y SWFLGDY+ EDGRLY+ATPVDPVFI LPI EEARMKK  
Sbjct: 40  TCFLYVNEMLEEIHWFKQSYSSWFLGDYVAEDGRLYSATPVDPVFIFLPIFEEARMKKGD 99

Query: 226 DPGKFRQLDEIIFINGYPGYQHLSTIADKSMQVVCDFKEIGSTKFFRLNDSKVLAWLYYK 405
           D GKFRQLD+I+FINGYPGY HL  +A+K MQVVC+ KE+GS++FFRL+DSKVLAWLY+K
Sbjct: 100 DLGKFRQLDDIMFINGYPGYLHLLPLAEKFMQVVCEVKEVGSSRFFRLDDSKVLAWLYHK 159

Query: 406 VHQLKQTIPTLDRNYAAQDEKDILADAVSILAEY 507
           V QLK+T+ TLD+NYAA++EK+ L DAVSIL EY
Sbjct: 160 VCQLKRTLCTLDKNYAAREEKETLCDAVSILGEY 193


>ref|XP_002333390.1| predicted protein [Populus trichocarpa] gi|222836425|gb|EEE74832.1|
           predicted protein [Populus trichocarpa]
          Length = 551

 Score =  231 bits (589), Expect = 5e-59
 Identities = 115/158 (72%), Positives = 130/158 (82%), Gaps = 4/158 (2%)
 Frame = +1

Query: 46  TSYLLTN----GVLQELHWFKQAYGSWFLGDYICEDGRLYAATPVDPVFILLPILEEARM 213
           T+YLL++     VLQELHWFKQ+Y SWFLGDY+ +DG LY ATPVDPVFILLPI EEARM
Sbjct: 309 TNYLLSHDNEGAVLQELHWFKQSYTSWFLGDYVSQDGSLYTATPVDPVFILLPIFEEARM 368

Query: 214 KKEGDPGKFRQLDEIIFINGYPGYQHLSTIADKSMQVVCDFKEIGSTKFFRLNDSKVLAW 393
           KK  D GKFRQLDEIIFIN YPGY HL +IA+  M VVC+ KEIGS+KFFRL+DSKVLAW
Sbjct: 369 KKRDDLGKFRQLDEIIFINDYPGYHHLMSIAENCMGVVCEIKEIGSSKFFRLDDSKVLAW 428

Query: 394 LYYKVHQLKQTIPTLDRNYAAQDEKDILADAVSILAEY 507
           LY KV QLK+ + +LD+NYAAQDEK  LA AVSIL EY
Sbjct: 429 LYCKVFQLKKALCSLDKNYAAQDEKYTLAGAVSILGEY 466


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