BLASTX nr result
ID: Panax21_contig00021078
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00021078
(718 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001054555.1| Os05g0132000 [Oryza sativa Japonica Group] g... 82 6e-30
gb|EEE62221.1| hypothetical protein OsJ_17008 [Oryza sativa Japo... 82 6e-30
ref|XP_002439228.1| hypothetical protein SORBIDRAFT_09g002630 [S... 77 2e-28
ref|XP_003569069.1| PREDICTED: pentatricopeptide repeat-containi... 75 8e-28
emb|CBI22850.3| unnamed protein product [Vitis vinifera] 111 2e-22
>ref|NP_001054555.1| Os05g0132000 [Oryza sativa Japonica Group]
gi|52353663|gb|AAU44229.1| hypothetical protein [Oryza
sativa Japonica Group] gi|113578106|dbj|BAF16469.1|
Os05g0132000 [Oryza sativa Japonica Group]
gi|125550727|gb|EAY96436.1| hypothetical protein
OsI_18334 [Oryza sativa Indica Group]
Length = 637
Score = 82.0 bits (201), Expect(3) = 6e-30
Identities = 38/79 (48%), Positives = 51/79 (64%)
Frame = -1
Query: 400 MFDQAHYLLENILMEKCSPNTVMLNTFIKGLCAEGRIDWAMKLFDQMENNGCSPNATSFN 221
MFDQA L++ +LM+ C PNTV NT I LC GR+ A+ +F M NGC PN ++N
Sbjct: 412 MFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYN 471
Query: 220 ELLNGLFKVNNFTVAFELI 164
ELL+GLF+ N AF ++
Sbjct: 472 ELLHGLFREGNHKDAFAMV 490
Score = 61.6 bits (148), Expect(3) = 6e-30
Identities = 27/46 (58%), Positives = 33/46 (71%)
Frame = -2
Query: 543 LIAGFAKSGDLVGASETWNEMITHGCHPNVVAYTFMLDVLCRNFMF 406
L+ GF+ +GDL GA WNEM + GC PNVV YT M+DVLC+ MF
Sbjct: 368 LVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMF 413
Score = 33.9 bits (76), Expect(3) = 6e-30
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = -2
Query: 168 LLHMEKREIELNLVTHNTIINGFCCVDMLEETLKLLGR 55
++ M EL+LVT+NT+IN C + M + + LLGR
Sbjct: 490 VIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGR 527
>gb|EEE62221.1| hypothetical protein OsJ_17008 [Oryza sativa Japonica Group]
Length = 584
Score = 82.0 bits (201), Expect(3) = 6e-30
Identities = 38/79 (48%), Positives = 51/79 (64%)
Frame = -1
Query: 400 MFDQAHYLLENILMEKCSPNTVMLNTFIKGLCAEGRIDWAMKLFDQMENNGCSPNATSFN 221
MFDQA L++ +LM+ C PNTV NT I LC GR+ A+ +F M NGC PN ++N
Sbjct: 359 MFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYN 418
Query: 220 ELLNGLFKVNNFTVAFELI 164
ELL+GLF+ N AF ++
Sbjct: 419 ELLHGLFREGNHKDAFAMV 437
Score = 61.6 bits (148), Expect(3) = 6e-30
Identities = 27/46 (58%), Positives = 33/46 (71%)
Frame = -2
Query: 543 LIAGFAKSGDLVGASETWNEMITHGCHPNVVAYTFMLDVLCRNFMF 406
L+ GF+ +GDL GA WNEM + GC PNVV YT M+DVLC+ MF
Sbjct: 315 LVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMF 360
Score = 33.9 bits (76), Expect(3) = 6e-30
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = -2
Query: 168 LLHMEKREIELNLVTHNTIINGFCCVDMLEETLKLLGR 55
++ M EL+LVT+NT+IN C + M + + LLGR
Sbjct: 437 VIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGR 474
>ref|XP_002439228.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
gi|241944513|gb|EES17658.1| hypothetical protein
SORBIDRAFT_09g002630 [Sorghum bicolor]
Length = 653
Score = 76.6 bits (187), Expect(3) = 2e-28
Identities = 34/79 (43%), Positives = 52/79 (65%)
Frame = -1
Query: 400 MFDQAHYLLENILMEKCSPNTVMLNTFIKGLCAEGRIDWAMKLFDQMENNGCSPNATSFN 221
MF+QA L++ +L+E C PNTV NT I+ LC R+ A+ +F +M +GC PN ++N
Sbjct: 424 MFNQAESLIDKMLVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYN 483
Query: 220 ELLNGLFKVNNFTVAFELI 164
ELL+GLF+ N A +++
Sbjct: 484 ELLHGLFREGNCGDALQMV 502
Score = 58.9 bits (141), Expect(3) = 2e-28
Identities = 26/46 (56%), Positives = 31/46 (67%)
Frame = -2
Query: 543 LIAGFAKSGDLVGASETWNEMITHGCHPNVVAYTFMLDVLCRNFMF 406
LI GF+K+GDL GA WN+M GC PNVV YT M+ V C+ MF
Sbjct: 380 LIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMF 425
Score = 36.6 bits (83), Expect(3) = 2e-28
Identities = 15/38 (39%), Positives = 26/38 (68%)
Frame = -2
Query: 168 LLHMEKREIELNLVTHNTIINGFCCVDMLEETLKLLGR 55
++ M+ IEL+LVT+NT+++G C + M E + +GR
Sbjct: 502 VIEMQNHGIELSLVTYNTVVSGLCQMRMGREAMFFVGR 539
Score = 50.4 bits (119), Expect(2) = 6e-07
Identities = 22/67 (32%), Positives = 39/67 (58%)
Frame = -1
Query: 367 ILMEKCSPNTVMLNTFIKGLCAEGRIDWAMKLFDQMENNGCSPNATSFNELLNGLFKVNN 188
++ E +P+TV N I+GLC+ G + A + + ME +GC PNA +++ L++G K +
Sbjct: 330 MVAEGWAPSTVSYNVLIRGLCSVGDLKGASSVLNDMEQHGCFPNARTYSTLIDGFSKAGD 389
Query: 187 FTVAFEL 167
A +
Sbjct: 390 LDGAISI 396
Score = 28.9 bits (63), Expect(2) = 6e-07
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
Frame = -2
Query: 558 QPIVV----LIAGFAKSGDLVGASETWNEMITHGCHPNVVAYTFML 433
QP V+ ++ F K+G+L A M+ GC PNV +T ++
Sbjct: 266 QPNVITYTTIVNAFCKAGELRMACAILARMVITGCTPNVATFTALV 311
Score = 42.4 bits (98), Expect(2) = 8e-07
Identities = 19/39 (48%), Positives = 23/39 (58%)
Frame = -2
Query: 546 VLIAGFAKSGDLVGASETWNEMITHGCHPNVVAYTFMLD 430
VLI G GDL GAS N+M HGC PN Y+ ++D
Sbjct: 344 VLIRGLCSVGDLKGASSVLNDMEQHGCFPNARTYSTLID 382
Score = 36.6 bits (83), Expect(2) = 8e-07
Identities = 18/64 (28%), Positives = 28/64 (43%)
Frame = -1
Query: 394 DQAHYLLENILMEKCSPNTVMLNTFIKGLCAEGRIDWAMKLFDQMENNGCSPNATSFNEL 215
D A + ++ C PN V+ + C + + A L D+M C PN +FN L
Sbjct: 391 DGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTL 450
Query: 214 LNGL 203
+ L
Sbjct: 451 IRSL 454
>ref|XP_003569069.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Brachypodium distachyon]
Length = 642
Score = 74.7 bits (182), Expect(3) = 8e-28
Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 4/86 (4%)
Frame = -1
Query: 400 MFDQAHYLLENILMEKCSPNTVMLNTFIKGLCAEGRIDWAMKLFDQMENNGCSPNATSFN 221
MFDQA L++ + +E C PNT+ NT I+ LC GR A+ +F M GC PN ++N
Sbjct: 417 MFDQAENLIDKMSLENCPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYN 476
Query: 220 ELLNGLFKVNNFTVAF----ELIAHG 155
ELL+GLF+ N A E++ HG
Sbjct: 477 ELLHGLFREGNCEDALRMLTEMLNHG 502
Score = 59.7 bits (143), Expect(3) = 8e-28
Identities = 27/46 (58%), Positives = 32/46 (69%)
Frame = -2
Query: 543 LIAGFAKSGDLVGASETWNEMITHGCHPNVVAYTFMLDVLCRNFMF 406
LI GF+K+GDL A WN+M GC PNVV YT M+DVLC+ MF
Sbjct: 373 LIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMF 418
Score = 35.8 bits (81), Expect(3) = 8e-28
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = -2
Query: 168 LLHMEKREIELNLVTHNTIINGFCCVDMLEETLKLLGR 55
L M EL+LV++NT I+G C + M++E + LLGR
Sbjct: 495 LTEMLNHGFELSLVSYNTTISGLCQMRMIKEAMILLGR 532
Score = 41.2 bits (95), Expect(2) = 3e-06
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = -1
Query: 352 CSPNTVMLNTFIKGLCAEGRIDWAMKLFDQMENNGCSPNATSFNELLNGL 203
C PN V+ + LC + D A L D+M C PN +FN L+ L
Sbjct: 398 CKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLENCPPNTLTFNTLIRSL 447
Score = 35.8 bits (81), Expect(2) = 3e-06
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 6/63 (9%)
Frame = -2
Query: 558 QPIVVLIAGFAKSGDLVGASETWNEMITHGCHPNVVAYTFMLDVLC------RNFMFISC 397
Q VL+ GF G + A WN M+ G P+ ++Y ++ LC R SC
Sbjct: 298 QTFTVLVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSC 357
Query: 396 LTK 388
+ K
Sbjct: 358 MGK 360
>emb|CBI22850.3| unnamed protein product [Vitis vinifera]
Length = 724
Score = 111 bits (277), Expect = 2e-22
Identities = 65/150 (43%), Positives = 83/150 (55%), Gaps = 3/150 (2%)
Frame = -1
Query: 604 TVCNQMERNSWPPNVTTYCCAHCWVCKIWGLGRCI*DVERDDNPWLPS*CCGIHLHV--- 434
+V NQME N PNV TY K D++ W G H +V
Sbjct: 372 SVFNQMEINGCCPNVRTYSALIDGYAKAG-------DLDGASEVWNWMITHGCHPNVVAY 424
Query: 433 GCSL*EFHVYFMFDQAHYLLENILMEKCSPNTVMLNTFIKGLCAEGRIDWAMKLFDQMEN 254
C + MF+QA+ L+EN+ +E C PNTV NTFIKGLC GR+DWA+K+FDQM N
Sbjct: 425 TCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGN 484
Query: 253 NGCSPNATSFNELLNGLFKVNNFTVAFELI 164
+GC PN T++NELL+ L K F AF L+
Sbjct: 485 SGCFPNTTTYNELLDSLLKDRRFGEAFGLV 514
Score = 101 bits (252), Expect = 1e-19
Identities = 73/178 (41%), Positives = 90/178 (50%), Gaps = 15/178 (8%)
Frame = -2
Query: 543 LIAGFAKSGDLVGASETWNEMITHGCHPNVVAYTFMLDVLCRNFMFISCLTKLITFSKIY 364
LI G+AK+GDL GASE WN MITHGCHPNVVAYT M+DVLCRN M F++ Y
Sbjct: 392 LIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSM----------FNQAY 441
Query: 363 *WKNVHQIQLC*THLLKVCVLKEE*IGQ*NCLIRWKIMDAHXXXXXLMSY*MVSSK*TTS 184
Q++ C + + + G K+ D + TT+
Sbjct: 442 CLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPN--------TTT 493
Query: 183 Q*HL--SLLH-------------MEKREIELNLVTHNTIINGFCCVDMLEETLKLLGR 55
L SLL ME R IELNLVT+NTII G+CC ML E L+LLG+
Sbjct: 494 YNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGK 551
Score = 47.4 bits (111), Expect(2) = 3e-07
Identities = 20/68 (29%), Positives = 36/68 (52%)
Frame = -1
Query: 403 FMFDQAHYLLENILMEKCSPNTVMLNTFIKGLCAEGRIDWAMKLFDQMENNGCSPNATSF 224
+ F++A LL+ ++ + PN + T I L G ++ ++ + +M GCSPN +F
Sbjct: 260 YTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTF 319
Query: 223 NELLNGLF 200
L+ G F
Sbjct: 320 TSLIKGFF 327
Score = 33.1 bits (74), Expect(2) = 3e-07
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = -2
Query: 546 VLIAGFAKSGDLVGASETWNEMITHGCHPNVVAYTFMLDVLCR 418
+L+ K+ + GA + EM + GC P+ V+YT ++ LC+
Sbjct: 186 ILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCK 228