BLASTX nr result

ID: Panax21_contig00021047 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00021047
         (2258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266662.1| PREDICTED: uncharacterized protein LOC100242...   308   3e-81
emb|CAN68081.1| hypothetical protein VITISV_021806 [Vitis vinifera]   291   5e-76
ref|XP_003628983.1| RING-H2 finger protein ATL5F [Medicago trunc...   248   5e-63
ref|XP_002519894.1| transporter, putative [Ricinus communis] gi|...   245   4e-62
ref|XP_004145575.1| PREDICTED: uncharacterized protein LOC101211...   244   7e-62

>ref|XP_002266662.1| PREDICTED: uncharacterized protein LOC100242504 [Vitis vinifera]
           gi|296085502|emb|CBI29234.3| unnamed protein product
           [Vitis vinifera]
          Length = 553

 Score =  308 bits (790), Expect = 3e-81
 Identities = 168/311 (54%), Positives = 214/311 (68%), Gaps = 10/311 (3%)
 Frame = +1

Query: 13  MSLSSYPSF-SNSIHHY----PNPSLAIPMFHSHRHQFFQVQGLRFSITLSTTSGHRNRI 177
           M+ SS  SF S+ +H      PNP+L           F Q + LRFS+  S  SG R R 
Sbjct: 1   MASSSSSSFLSHPLHRSQDLKPNPNLP----------FLQHRSLRFSLNFSCVSGPRYRP 50

Query: 178 QCL----LSGKSQEGLSFP-KLPPELVRVLVASVIIFLGLGIRTCSAAASAQISPILAAD 342
            CL     SG S      P +LPP+L+++   S I+FLG  +R CSA  S +   ++AA+
Sbjct: 51  PCLPALPTSGVSPPPPEQPSRLPPDLLQIASVSAILFLGFSVRACSAT-SGRFPAVVAAE 109

Query: 343 CQPLAQPQTIQENGDVEKSKNVDVFEDEEMRAAFENWKSKTYSLTVPLRIIALRSSVPPL 522
           C+ + Q Q IQ++  V KS++ +  ED+E++ AF+ WKSK Y+LTVPLRI+ LR S+PP 
Sbjct: 110 CRTV-QEQRIQDSDGVGKSEDTENLEDKELKEAFKRWKSKPYALTVPLRIVTLRGSLPPS 168

Query: 523 WIKNFMQAQGKRARLRLEFRGGIKDIFSELSTAFSKRDAAPKSAVAADIVALGDSWLSFA 702
           W+K+FMQ+QG+R RL   FRG ++DIFSEL    SK    PKSA+AADIV +GDSWL  A
Sbjct: 169 WVKDFMQSQGRRLRLLSNFRGSLQDIFSELCRPLSKGKIEPKSALAADIVTVGDSWLDLA 228

Query: 703 INKALIEPIQGIEDQEWFDGLSDKWKEYLRRNSEGKLDSEGKIWAAPYRWGSMVIAYKKS 882
           INK +IEPIQG+EDQ+WF GLS KWK YLRRNS+G+LD+EGKIWAAPYRWGSMVIAYKKS
Sbjct: 229 INKGIIEPIQGVEDQDWFRGLSYKWKVYLRRNSKGELDAEGKIWAAPYRWGSMVIAYKKS 288

Query: 883 KFKKLNLAPIE 915
           KF+K  LAPIE
Sbjct: 289 KFEKHKLAPIE 299


>emb|CAN68081.1| hypothetical protein VITISV_021806 [Vitis vinifera]
          Length = 875

 Score =  291 bits (745), Expect = 5e-76
 Identities = 154/286 (53%), Positives = 197/286 (68%), Gaps = 19/286 (6%)
 Frame = +1

Query: 115  QVQGLRFSITLSTTSGHRNRIQCL----LSGKSQEGLSFP-KLPPELVRVLVASVIIFLG 279
            Q + LRFS+  S  SG R R  CL     SG S      P +LPP+L+++   S I+FLG
Sbjct: 338  QHRSLRFSLNFSCVSGPRYRPPCLPALPTSGVSPPPPEQPSRLPPDLLQIASVSAILFLG 397

Query: 280  LGIRTCSAAASAQISPILAADCQPLAQPQTIQENGDVEKSKNVDVFEDEEMRAAFENWKS 459
              +R CSA  S +   ++AA+C+ + Q Q IQ++  V KS++ +  ED+E++ AF+ WKS
Sbjct: 398  FSVRACSAT-SGRFPAVVAAECRTV-QEQRIQDSDGVGKSEDTENLEDKELKEAFKRWKS 455

Query: 460  KTYSLTVPLRIIALRSSVPPLWIKNFMQAQGKRARLRLEFRGGIKDIFSELSTAFSKRDA 639
            K Y+LTVPLRI+ LR S+PP W+K+FMQ+QG+R RL   FRG ++DIFSEL    SK   
Sbjct: 456  KPYALTVPLRIVTLRGSLPPSWVKDFMQSQGRRLRLLSNFRGSLQDIFSELCRPLSKGKI 515

Query: 640  APKSAVAADIVALGDSWLSFAINKALIEPIQGIEDQEWFDGLSDKWKEY----------- 786
             PKSA+AADIV +GDSWL  AINK +IEPIQG+EDQ+WF GLS KWK Y           
Sbjct: 516  EPKSALAADIVTVGDSWLDLAINKGIIEPIQGVEDQDWFRGLSYKWKGYFKFDTDWFRSF 575

Query: 787  ---LRRNSEGKLDSEGKIWAAPYRWGSMVIAYKKSKFKKLNLAPIE 915
                +RNS+G+LD+EGKIWAAPYRWGSMVIAYKKSKF+K  LAPIE
Sbjct: 576  YVIFKRNSKGELDAEGKIWAAPYRWGSMVIAYKKSKFEKHKLAPIE 621


>ref|XP_003628983.1| RING-H2 finger protein ATL5F [Medicago truncatula]
           gi|355523005|gb|AET03459.1| RING-H2 finger protein ATL5F
           [Medicago truncatula]
          Length = 786

 Score =  248 bits (633), Expect = 5e-63
 Identities = 125/234 (53%), Positives = 169/234 (72%), Gaps = 3/234 (1%)
 Frame = +1

Query: 223 KLPPELVRVLVASVIIFLGLGIRTCSAAASAQISPILAADCQPLAQPQTIQENGDVEK-- 396
           KLP  LVRV V S+ +FL  GIR CSA+    + P+       + Q QTIQ++ D  K  
Sbjct: 76  KLPRALVRVTV-SIALFLCCGIRACSAS----LPPLTNV----VQQEQTIQDDNDARKHD 126

Query: 397 -SKNVDVFEDEEMRAAFENWKSKTYSLTVPLRIIALRSSVPPLWIKNFMQAQGKRARLRL 573
            ++N+DV  D+E+ A+F  WKSKTY+LTVPL+++ALR S+PP WIK+F+ +QG R + ++
Sbjct: 127 ANENIDV--DKELEASFNAWKSKTYALTVPLKVVALRGSIPPSWIKDFINSQGNRMKFKV 184

Query: 574 EFRGGIKDIFSELSTAFSKRDAAPKSAVAADIVALGDSWLSFAINKALIEPIQGIEDQEW 753
           ++   ++ IFS+LS  F+K D  P +A+AADIV +GDSWL FA+ KA+IEPI+ +E QEW
Sbjct: 185 KYYATLESIFSDLSIPFTKGDHVPTTALAADIVGIGDSWLKFAVEKAIIEPIKDVEGQEW 244

Query: 754 FDGLSDKWKEYLRRNSEGKLDSEGKIWAAPYRWGSMVIAYKKSKFKKLNLAPIE 915
           F  L++KWK YLRRN EG++D EG IWAAPYRWG MVIAYK + F+K  LAPIE
Sbjct: 245 FKNLAEKWKVYLRRNCEGEVDPEGDIWAAPYRWGCMVIAYKTNSFQKHKLAPIE 298


>ref|XP_002519894.1| transporter, putative [Ricinus communis]
           gi|223540940|gb|EEF42498.1| transporter, putative
           [Ricinus communis]
          Length = 507

 Score =  245 bits (625), Expect = 4e-62
 Identities = 132/235 (56%), Positives = 164/235 (69%), Gaps = 6/235 (2%)
 Frame = +1

Query: 229 PPELVRVLVASVIIFLGLGIRTCSAAASAQISPILAADCQPLAQPQTIQENGDVEKSKNV 408
           PP  + V  AS  +F  L I    ++ +A +S        P+A+   IQE+ D       
Sbjct: 35  PPAFLGVAAASASLFFTLTIGVSRSSLAAPVST-------PIAKIAPIQED-DCN----- 81

Query: 409 DVFEDEEMRAAFENWKSKTYSLTVPLRIIALRSSVPPLWIKNFMQAQGKRARLRLEFRGG 588
           DV +D+    AFENWKSKT++L+VPLRI+ALR S+PP WIK+FMQ+QGKR RLR +  GG
Sbjct: 82  DVDDDD----AFENWKSKTFALSVPLRIVALRGSIPPSWIKDFMQSQGKRLRLRSKLVGG 137

Query: 589 IKDIFSELSTAFSKRDAAPK------SAVAADIVALGDSWLSFAINKALIEPIQGIEDQE 750
           + +IFS+LS +FS  +   K      S  AADIV++GDSWLSFAI KALIEPI+G+EDQ+
Sbjct: 138 LDNIFSDLSMSFSNNNIKRKVNIGSSSVAAADIVSIGDSWLSFAIQKALIEPIRGVEDQD 197

Query: 751 WFDGLSDKWKEYLRRNSEGKLDSEGKIWAAPYRWGSMVIAYKKSKFKKLNLAPIE 915
           WF GLSDKWK YLRRN EG +D  G+IW APYRWGSMVIAYKKSKF+K  LAPIE
Sbjct: 198 WFKGLSDKWKVYLRRNCEGSIDPNGEIWGAPYRWGSMVIAYKKSKFQKNKLAPIE 252


>ref|XP_004145575.1| PREDICTED: uncharacterized protein LOC101211357 [Cucumis sativus]
           gi|449485058|ref|XP_004157059.1| PREDICTED:
           uncharacterized protein LOC101230567 [Cucumis sativus]
          Length = 549

 Score =  244 bits (623), Expect = 7e-62
 Identities = 138/297 (46%), Positives = 187/297 (62%), Gaps = 6/297 (2%)
 Frame = +1

Query: 64  NPSLAIPMFHSHRHQFFQVQGLRFSITLSTTSGHRNRIQCLLSGKSQEGLSFPKLPPELV 243
           NPS +IP   S    +  +    F    S T  H    +   SG+++    FP +P    
Sbjct: 21  NPSSSIPSLSSSSSNYTTI----FRCCSSLTQMHSPEDEP--SGQAK----FPIIPHTPP 70

Query: 244 RVLVASVIIFL------GLGIRTCSAAASAQISPILAADCQPLAQPQTIQENGDVEKSKN 405
             L AS ++FL      G+G R+ S AAS+ + P LA+D   L + + +  +GD      
Sbjct: 71  LRLAASAVLFLSFSIGFGIGARS-SFAASSPLPPSLASDNYNLEEEKVVP-SGD------ 122

Query: 406 VDVFEDEEMRAAFENWKSKTYSLTVPLRIIALRSSVPPLWIKNFMQAQGKRARLRLEFRG 585
            +  E+++M  AFE WKSK ++LTVPL ++ALR S+PP WIK F+Q+QGKR +  ++F G
Sbjct: 123 -EKVEEKKMDEAFEEWKSKKFALTVPLNVVALRDSIPPSWIKEFIQSQGKRLKFTVKFNG 181

Query: 586 GIKDIFSELSTAFSKRDAAPKSAVAADIVALGDSWLSFAINKALIEPIQGIEDQEWFDGL 765
            ++ IFSELS    K    P S + AD+V++GDSWL+FAI KALIEPIQ +EDQ+W++ L
Sbjct: 182 SLESIFSELSVPVGKSKVKPSSIMVADVVSIGDSWLNFAIKKALIEPIQDVEDQDWYNNL 241

Query: 766 SDKWKEYLRRNSEGKLDSEGKIWAAPYRWGSMVIAYKKSKFKKLNLAPIEVVSLLKC 936
           S KWK  LRRNSEG++D EGKIW+APYRWG MVIAY K KF+K NLAP+E  S L C
Sbjct: 242 STKWKVLLRRNSEGEIDPEGKIWSAPYRWGCMVIAYNKVKFRKNNLAPMEDWSDLWC 298


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