BLASTX nr result

ID: Panax21_contig00021045 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00021045
         (1516 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002437934.1| hypothetical protein SORBIDRAFT_10g005066 [S...    65   5e-08
gb|AFW85616.1| hypothetical protein ZEAMMB73_558830 [Zea mays]         62   3e-07
ref|NP_001132392.1| uncharacterized protein LOC100193838 [Zea ma...    62   3e-07
gb|AFW85617.1| hypothetical protein ZEAMMB73_558830 [Zea mays]         62   5e-07
gb|ABW81058.1| atlantys transposase [Arabidopsis lyrata subsp. l...    58   6e-06

>ref|XP_002437934.1| hypothetical protein SORBIDRAFT_10g005066 [Sorghum bicolor]
           gi|241916157|gb|EER89301.1| hypothetical protein
           SORBIDRAFT_10g005066 [Sorghum bicolor]
          Length = 553

 Score = 65.1 bits (157), Expect = 5e-08
 Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 2/167 (1%)
 Frame = -3

Query: 815 STITPSQISDIRSLFKIPEEYQLRVPMPDEKMFWRPEGEWVAVPLYVLKYGVRFPLHDFI 636
           S++T  ++  I S + +PE+Y   +P   ++         + V  + L+ G+R PLH F 
Sbjct: 43  SSLTQEELDAICSKYGVPEQYSAVLPAGHQRACSPLPPGAICVNEHALEAGMRVPLHAFF 102

Query: 635 SSFLSFVGVGFAQLVPNAYIHLVSFIAVCQEVGLNPGLDLFFALFTVSGSKEPGLRQLNK 456
              L+  GV   Q+ PN +  +  FI +  + G+ P L +F   F++ G +  G      
Sbjct: 103 CEVLAHFGVAPIQIAPNGWRAMAGFIVLSHKAGVAPSLPVFRHFFSLCGFRFKGWYYFRG 162

Query: 455 RPNRTVPIK-TPSSNKGWHEQ*FFAKG-TDLQLLPRWAHPADQAAKI 321
           +       K  P S  GW E  FF K  T      +W H   + + +
Sbjct: 163 KDVAGALFKGMPPSFAGWKEAFFFLKSPTPWPCRVKWGHELSKGSTV 209


>gb|AFW85616.1| hypothetical protein ZEAMMB73_558830 [Zea mays]
          Length = 407

 Score = 62.4 bits (150), Expect = 3e-07
 Identities = 40/143 (27%), Positives = 64/143 (44%), Gaps = 1/143 (0%)
 Frame = -3

Query: 806 TPSQISDIRSLFKIPEEYQLRVPMPDEKMFWRPEGEWVAVPLYVLKYGVRFPLHDFISSF 627
           T   I  +   + +PE+Y   +P   ++    P G  V+V  + L+ G+R PLH F    
Sbjct: 56  TQGSIDALCRKYGVPEQYSAVLPAGHQRAC-SPPGSAVSVYAHALEAGMRVPLHGFFCEV 114

Query: 626 LSFVGVGFAQLVPNAYIHLVSFIAVCQEVGLNPGLDLFFALFTVSGSKEPGLRQLNKRPN 447
           L+  GV  +Q+ PN +  +  F+ +    G+ P L +F   F++   K  G      +  
Sbjct: 115 LAHFGVAPSQIAPNGWRAMAGFVVLSHSAGVAPSLPVFRHFFSLCAFKLKGWYYFRGKDA 174

Query: 446 RTVPIK-TPSSNKGWHEQ*FFAK 381
             +  K  P S  GW E  FF K
Sbjct: 175 AGLLFKGMPLSIAGWKEAFFFLK 197


>ref|NP_001132392.1| uncharacterized protein LOC100193838 [Zea mays]
           gi|194694258|gb|ACF81213.1| unknown [Zea mays]
           gi|413952966|gb|AFW85615.1| hypothetical protein
           ZEAMMB73_558830 [Zea mays]
          Length = 513

 Score = 62.4 bits (150), Expect = 3e-07
 Identities = 40/143 (27%), Positives = 64/143 (44%), Gaps = 1/143 (0%)
 Frame = -3

Query: 806 TPSQISDIRSLFKIPEEYQLRVPMPDEKMFWRPEGEWVAVPLYVLKYGVRFPLHDFISSF 627
           T   I  +   + +PE+Y   +P   ++    P G  V+V  + L+ G+R PLH F    
Sbjct: 56  TQGSIDALCRKYGVPEQYSAVLPAGHQRAC-SPPGSAVSVYAHALEAGMRVPLHGFFCEV 114

Query: 626 LSFVGVGFAQLVPNAYIHLVSFIAVCQEVGLNPGLDLFFALFTVSGSKEPGLRQLNKRPN 447
           L+  GV  +Q+ PN +  +  F+ +    G+ P L +F   F++   K  G      +  
Sbjct: 115 LAHFGVAPSQIAPNGWRAMAGFVVLSHSAGVAPSLPVFRHFFSLCAFKLKGWYYFRGKDA 174

Query: 446 RTVPIK-TPSSNKGWHEQ*FFAK 381
             +  K  P S  GW E  FF K
Sbjct: 175 AGLLFKGMPLSIAGWKEAFFFLK 197


>gb|AFW85617.1| hypothetical protein ZEAMMB73_558830 [Zea mays]
          Length = 355

 Score = 61.6 bits (148), Expect = 5e-07
 Identities = 38/132 (28%), Positives = 61/132 (46%), Gaps = 1/132 (0%)
 Frame = -3

Query: 773 FKIPEEYQLRVPMPDEKMFWRPEGEWVAVPLYVLKYGVRFPLHDFISSFLSFVGVGFAQL 594
           + +PE+Y   +P   ++    P G  V+V  + L+ G+R PLH F    L+  GV  +Q+
Sbjct: 15  YGVPEQYSAVLPAGHQRAC-SPPGSAVSVYAHALEAGMRVPLHGFFCEVLAHFGVAPSQI 73

Query: 593 VPNAYIHLVSFIAVCQEVGLNPGLDLFFALFTVSGSKEPGLRQLNKRPNRTVPIK-TPSS 417
            PN +  +  F+ +    G+ P L +F   F++   K  G      +    +  K  P S
Sbjct: 74  APNGWRAMAGFVVLSHSAGVAPSLPVFRHFFSLCAFKLKGWYYFRGKDAAGLLFKGMPLS 133

Query: 416 NKGWHEQ*FFAK 381
             GW E  FF K
Sbjct: 134 IAGWKEAFFFLK 145


>gb|ABW81058.1| atlantys transposase [Arabidopsis lyrata subsp. lyrata]
          Length = 777

 Score = 58.2 bits (139), Expect = 6e-06
 Identities = 40/160 (25%), Positives = 70/160 (43%), Gaps = 3/160 (1%)
 Frame = -3

Query: 845 SEEFSHLHTPSTITPSQISDIRSLFKIPEEY--QLRVPMPDEKMFWRPEGEWVAVPLYVL 672
           S++ +  H  ST T   +  ++ L +IP E   + ++  P E      +G +    +Y  
Sbjct: 26  SDDIAGPHYRSTCTLQSLERLKELCRIPPEIMAEAQIASPTESPENHRDGYFCVYEIYFK 85

Query: 671 KYGVRFPLHDFISSFLSFVGVGFAQLVPNAYIHLVSFIAVCQEVGLNPGLDLFFALFTV- 495
             G+ FPL + +  +L+ + +   QL PN    ++  I +  E G   G+     L +V 
Sbjct: 86  GCGLTFPLPEALVLYLAALEIALPQLTPNLLRTILGIITIAAEAGYVIGVAELNELLSVR 145

Query: 494 SGSKEPGLRQLNKRPNRTVPIKTPSSNKGWHEQ*FFAKGT 375
           S SK+ G        NR +    P+ ++ WH   F  K T
Sbjct: 146 SSSKKTGYFSAYPNANRNIISHLPNKDENWHHPWFLIKKT 185


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