BLASTX nr result

ID: Panax21_contig00021025 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00021025
         (1669 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530291.1| ubiquitin-protein ligase, putative [Ricinus ...   654   0.0  
ref|XP_002282284.2| PREDICTED: F-box/kelch-repeat protein At5g60...   625   e-177
emb|CBI16301.3| unnamed protein product [Vitis vinifera]              618   e-174
ref|XP_003543480.1| PREDICTED: F-box/kelch-repeat protein At5g60...   594   e-167
ref|XP_003538211.1| PREDICTED: LOW QUALITY PROTEIN: F-box/kelch-...   592   e-166

>ref|XP_002530291.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223530189|gb|EEF32098.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 376

 Score =  654 bits (1686), Expect = 0.0
 Identities = 310/375 (82%), Positives = 338/375 (90%)
 Frame = +3

Query: 312  EERGDERSLVNMRLDGGDYDGRLKFGSSDSLFPGLYDDVALNCLAWACRSDYPSLSCLNK 491
            EE    RS++N R  GG  DGRL+ GSSDSL PGL DDVALNCLAWACRSDY SL+C+NK
Sbjct: 4    EEEVMSRSIINTR--GGVNDGRLRLGSSDSLLPGLIDDVALNCLAWACRSDYASLACINK 61

Query: 492  RFNLLMKSGYLYELRKKLEIVENWVYMVCDPRGWEAFNPVRNKWMKLPKIPCDECFNHAD 671
            RF+ L++SGYLY LRK+L I E+WVY+VCDPRGWEAF+PVR KWM LPKIPCDECFNHAD
Sbjct: 62   RFHKLIESGYLYGLRKQLGITEHWVYLVCDPRGWEAFDPVRKKWMALPKIPCDECFNHAD 121

Query: 672  KESLAVGSELLVFGRELFEFAIWKYSLIHHSWLKCDEMNCPRCLFGSSSLGSIAIVAGGS 851
            KESLAVGSELLVFGRELF+FAIWKYSLI   W+KC+ MN PRCLFGS SLGSIA+VAGGS
Sbjct: 122  KESLAVGSELLVFGRELFDFAIWKYSLIRRGWVKCEGMNRPRCLFGSGSLGSIAVVAGGS 181

Query: 852  DKSGNVLKSAELYDSSTGRWEMLPTMHSPRRLCSGFFMDEKFYVIGGMTSHTDSLTCGEE 1031
            DK+GNVL SAELYDSSTG+WEMLP MHSPRRLCSGFFMD KFYVIGGM+S T SLTCGEE
Sbjct: 182  DKNGNVLNSAELYDSSTGKWEMLPNMHSPRRLCSGFFMDGKFYVIGGMSSPTVSLTCGEE 241

Query: 1032 LDLKTWKWRRIEGMYPNVNRAAQAPPLVAVVDNQLYAVEYLTNMVKKYDKVKNSWDVLGR 1211
             D +T KWR IEGMYPNVNRAAQAPPLVAVVDNQLYAVEYLTNMVKKYDKVKN+W+VLGR
Sbjct: 242  YDFETRKWRMIEGMYPNVNRAAQAPPLVAVVDNQLYAVEYLTNMVKKYDKVKNTWEVLGR 301

Query: 1212 LPVRADSSNGWGLAFKACGKQLLVMGGQRSQEGEAIVLNSWCPESGVKNGTLDWKVLGVK 1391
            LPVRADSSNGWGLAFKACG++LLV+GGQR  EGEA+VLNSWCP+SGV NGTLDWKVLGVK
Sbjct: 302  LPVRADSSNGWGLAFKACGEKLLVVGGQRGPEGEAVVLNSWCPKSGVNNGTLDWKVLGVK 361

Query: 1392 ENVGVFVYNCAVMGC 1436
            E+VGVFVYNCAVMGC
Sbjct: 362  EHVGVFVYNCAVMGC 376


>ref|XP_002282284.2| PREDICTED: F-box/kelch-repeat protein At5g60570-like [Vitis vinifera]
          Length = 416

 Score =  625 bits (1613), Expect = e-177
 Identities = 305/380 (80%), Positives = 331/380 (87%)
 Frame = +3

Query: 297  DYLLEEERGDERSLVNMRLDGGDYDGRLKFGSSDSLFPGLYDDVALNCLAWACRSDYPSL 476
            DY L +E   E +L NMR     YDG  +  ++ SL PGL DDVAL CLA ACRSDY SL
Sbjct: 38   DYFLGKEEM-ETNLSNMRSKRRVYDGCGQIETNGSLLPGLCDDVALKCLALACRSDYASL 96

Query: 477  SCLNKRFNLLMKSGYLYELRKKLEIVENWVYMVCDPRGWEAFNPVRNKWMKLPKIPCDEC 656
            SCLN RFN L+KSG LY  RK L I E+WVY+VCD RGWEAF+ +R KWMKLPKIPCDEC
Sbjct: 97   SCLNTRFNKLIKSGNLYGERKVLGIAEHWVYLVCDLRGWEAFDAMRKKWMKLPKIPCDEC 156

Query: 657  FNHADKESLAVGSELLVFGRELFEFAIWKYSLIHHSWLKCDEMNCPRCLFGSSSLGSIAI 836
            FNHADKESLAVGSELLVFGRE ++FAIWKYSL+  +W+KC  MN PRCLFGSSSLGSIAI
Sbjct: 157  FNHADKESLAVGSELLVFGREFYDFAIWKYSLVRGNWIKCQGMNLPRCLFGSSSLGSIAI 216

Query: 837  VAGGSDKSGNVLKSAELYDSSTGRWEMLPTMHSPRRLCSGFFMDEKFYVIGGMTSHTDSL 1016
            VAGGSDKSGNVLKSAELYDSS+GRWEMLP MHSPRRLCSGFFMD KFYVIGGMTS TDSL
Sbjct: 217  VAGGSDKSGNVLKSAELYDSSSGRWEMLPNMHSPRRLCSGFFMDGKFYVIGGMTSPTDSL 276

Query: 1017 TCGEELDLKTWKWRRIEGMYPNVNRAAQAPPLVAVVDNQLYAVEYLTNMVKKYDKVKNSW 1196
            TCGEE DLKT +WR+IEGMYPNVNRAAQAPPLVAVVDNQLYAVEYLTNMVKKYDK KN+W
Sbjct: 277  TCGEEFDLKTREWRKIEGMYPNVNRAAQAPPLVAVVDNQLYAVEYLTNMVKKYDKEKNTW 336

Query: 1197 DVLGRLPVRADSSNGWGLAFKACGKQLLVMGGQRSQEGEAIVLNSWCPESGVKNGTLDWK 1376
            DVLGRLPVRAD SNGWGLAFKACG+QLLV+GGQR  EGEA+VLNSW P+SGVK+GTLDWK
Sbjct: 337  DVLGRLPVRADLSNGWGLAFKACGEQLLVVGGQRGPEGEAVVLNSWHPKSGVKDGTLDWK 396

Query: 1377 VLGVKENVGVFVYNCAVMGC 1436
            V+GVKE+VGVFVYNCAVMGC
Sbjct: 397  VIGVKEHVGVFVYNCAVMGC 416


>emb|CBI16301.3| unnamed protein product [Vitis vinifera]
          Length = 364

 Score =  618 bits (1594), Expect = e-174
 Identities = 296/357 (82%), Positives = 320/357 (89%)
 Frame = +3

Query: 366  YDGRLKFGSSDSLFPGLYDDVALNCLAWACRSDYPSLSCLNKRFNLLMKSGYLYELRKKL 545
            YDG  +  ++ SL PGL DDVAL CLA ACRSDY SLSCLN RFN L+KSG LY  RK L
Sbjct: 8    YDGCGQIETNGSLLPGLCDDVALKCLALACRSDYASLSCLNTRFNKLIKSGNLYGERKVL 67

Query: 546  EIVENWVYMVCDPRGWEAFNPVRNKWMKLPKIPCDECFNHADKESLAVGSELLVFGRELF 725
             I E+WVY+VCD RGWEAF+ +R KWMKLPKIPCDECFNHADKESLAVGSELLVFGRE +
Sbjct: 68   GIAEHWVYLVCDLRGWEAFDAMRKKWMKLPKIPCDECFNHADKESLAVGSELLVFGREFY 127

Query: 726  EFAIWKYSLIHHSWLKCDEMNCPRCLFGSSSLGSIAIVAGGSDKSGNVLKSAELYDSSTG 905
            +FAIWKYSL+  +W+KC  MN PRCLFGSSSLGSIAIVAGGSDKSGNVLKSAELYDSS+G
Sbjct: 128  DFAIWKYSLVRGNWIKCQGMNLPRCLFGSSSLGSIAIVAGGSDKSGNVLKSAELYDSSSG 187

Query: 906  RWEMLPTMHSPRRLCSGFFMDEKFYVIGGMTSHTDSLTCGEELDLKTWKWRRIEGMYPNV 1085
            RWEMLP MHSPRRLCSGFFMD KFYVIGGMTS TDSLTCGEE DLKT +WR+IEGMYPNV
Sbjct: 188  RWEMLPNMHSPRRLCSGFFMDGKFYVIGGMTSPTDSLTCGEEFDLKTREWRKIEGMYPNV 247

Query: 1086 NRAAQAPPLVAVVDNQLYAVEYLTNMVKKYDKVKNSWDVLGRLPVRADSSNGWGLAFKAC 1265
            NRAAQAPPLVAVVDNQLYAVEYLTNMVKKYDK KN+WDVLGRLPVRAD SNGWGLAFKAC
Sbjct: 248  NRAAQAPPLVAVVDNQLYAVEYLTNMVKKYDKEKNTWDVLGRLPVRADLSNGWGLAFKAC 307

Query: 1266 GKQLLVMGGQRSQEGEAIVLNSWCPESGVKNGTLDWKVLGVKENVGVFVYNCAVMGC 1436
            G+QLLV+GGQR  EGEA+VLNSW P+SGVK+GTLDWKV+GVKE+VGVFVYNCAVMGC
Sbjct: 308  GEQLLVVGGQRGPEGEAVVLNSWHPKSGVKDGTLDWKVIGVKEHVGVFVYNCAVMGC 364


>ref|XP_003543480.1| PREDICTED: F-box/kelch-repeat protein At5g60570-like [Glycine max]
          Length = 389

 Score =  594 bits (1531), Expect = e-167
 Identities = 291/399 (72%), Positives = 327/399 (81%)
 Frame = +3

Query: 240  SEKKKLCCSPKINKNESFSDYLLEEERGDERSLVNMRLDGGDYDGRLKFGSSDSLFPGLY 419
            ++K +L CS +  ++    +  LE +RG+           G  DG    G +DSL PGL 
Sbjct: 2    TKKLRLGCSFQGEEDGKKVNNFLEMDRGE-----------GVNDGFSGPGPNDSLIPGLI 50

Query: 420  DDVALNCLAWACRSDYPSLSCLNKRFNLLMKSGYLYELRKKLEIVENWVYMVCDPRGWEA 599
            DDVALNCLAW   SDY  LSC+NKRFN L+ SGYLY LRK+L  VE+ VYMVCDPRGW A
Sbjct: 51   DDVALNCLAWVSGSDYAVLSCINKRFNKLINSGYLYGLRKQLGAVEHLVYMVCDPRGWVA 110

Query: 600  FNPVRNKWMKLPKIPCDECFNHADKESLAVGSELLVFGRELFEFAIWKYSLIHHSWLKCD 779
            F+P  N+W+ LPKIPCDECFNHADKESLAVG ELLVFGREL EFAIWKYS+I   W+KC 
Sbjct: 111  FDPKINRWISLPKIPCDECFNHADKESLAVGCELLVFGRELMEFAIWKYSMICRGWVKCQ 170

Query: 780  EMNCPRCLFGSSSLGSIAIVAGGSDKSGNVLKSAELYDSSTGRWEMLPTMHSPRRLCSGF 959
            EMN PRCLFGSSSLGSIAIVAGGSDK GNVLKSAELYDSSTG WE+LP MH+PRRLCSGF
Sbjct: 171  EMNQPRCLFGSSSLGSIAIVAGGSDKYGNVLKSAELYDSSTGMWELLPNMHAPRRLCSGF 230

Query: 960  FMDEKFYVIGGMTSHTDSLTCGEELDLKTWKWRRIEGMYPNVNRAAQAPPLVAVVDNQLY 1139
            FMD KFYVIGGM+S T SL+CGEE DLKT  WR+IEGMYP VN   QAPPLVAVVDNQLY
Sbjct: 231  FMDGKFYVIGGMSSTTVSLSCGEEYDLKTRSWRKIEGMYPYVNVGVQAPPLVAVVDNQLY 290

Query: 1140 AVEYLTNMVKKYDKVKNSWDVLGRLPVRADSSNGWGLAFKACGKQLLVMGGQRSQEGEAI 1319
            AVE+LTNMVKKYDK +N+W+ LGRLPVRADSSNGWGLAFKACG+QLLV+GGQR  EGEAI
Sbjct: 291  AVEHLTNMVKKYDKERNTWNELGRLPVRADSSNGWGLAFKACGEQLLVVGGQRGPEGEAI 350

Query: 1320 VLNSWCPESGVKNGTLDWKVLGVKENVGVFVYNCAVMGC 1436
            VL+SWCP+SG+ NGT+DW+VLGVKE+VGVFVYNCAVMGC
Sbjct: 351  VLSSWCPKSGISNGTIDWQVLGVKEHVGVFVYNCAVMGC 389


>ref|XP_003538211.1| PREDICTED: LOW QUALITY PROTEIN: F-box/kelch-repeat protein
            At5g60570-like [Glycine max]
          Length = 397

 Score =  592 bits (1526), Expect = e-166
 Identities = 283/379 (74%), Positives = 323/379 (85%), Gaps = 2/379 (0%)
 Frame = +3

Query: 303  LLEEERGDERSLVNMRLDGGDYDGRLKFGSSDSLFPGLYDDVALNCLAWACRSDYPSLSC 482
            L E+E     S V +    G  DG  + G +DSL PGL+DDVALNCLAW  RSDY SL+C
Sbjct: 11   LQEDEEKVNNSFVELDTREGVNDGFPRVGPNDSLLPGLFDDVALNCLAWVNRSDYASLAC 70

Query: 483  LNKRFNLLMKSGYLYELRKKLEIVE--NWVYMVCDPRGWEAFNPVRNKWMKLPKIPCDEC 656
            +NKR+NLL++SGYL+ELRKKL IVE  +W  +VCDPRGWE F+P RN+W+ LPKIP DEC
Sbjct: 71   INKRYNLLIRSGYLFELRKKLGIVELEHWFILVCDPRGWEVFDPKRNRWITLPKIPWDEC 130

Query: 657  FNHADKESLAVGSELLVFGRELFEFAIWKYSLIHHSWLKCDEMNCPRCLFGSSSLGSIAI 836
            FNHADKESLAVGSELLVFGRE+ +FAIWKYSLI   W+KC EMN PRCLFGS SLGSIAI
Sbjct: 131  FNHADKESLAVGSELLVFGREMMDFAIWKYSLISRGWVKCKEMNHPRCLFGSGSLGSIAI 190

Query: 837  VAGGSDKSGNVLKSAELYDSSTGRWEMLPTMHSPRRLCSGFFMDEKFYVIGGMTSHTDSL 1016
            VAGGSDK GNVL+SAELYDS++G W++LP MH+PRRLCSGFFMD KFYVIGGM+S T SL
Sbjct: 191  VAGGSDKYGNVLESAELYDSNSGTWKLLPNMHTPRRLCSGFFMDGKFYVIGGMSSPTVSL 250

Query: 1017 TCGEELDLKTWKWRRIEGMYPNVNRAAQAPPLVAVVDNQLYAVEYLTNMVKKYDKVKNSW 1196
            TCGEE DLKT  WR+IE MYP VN AAQAPPLVAVVDNQLYAVE+LTNMV+KYDK +N+W
Sbjct: 251  TCGEEYDLKTRNWRKIERMYPYVNGAAQAPPLVAVVDNQLYAVEHLTNMVRKYDKERNTW 310

Query: 1197 DVLGRLPVRADSSNGWGLAFKACGKQLLVMGGQRSQEGEAIVLNSWCPESGVKNGTLDWK 1376
              LGRLPVRADSSNGWGLAFKACG++LLV+ GQRS EGEA+VLNSWCP +GV+NGT+DW+
Sbjct: 311  SELGRLPVRADSSNGWGLAFKACGEKLLVVSGQRSPEGEAVVLNSWCPRTGVRNGTIDWQ 370

Query: 1377 VLGVKENVGVFVYNCAVMG 1433
            VLGVKE+VGVFVYNCAVMG
Sbjct: 371  VLGVKEHVGVFVYNCAVMG 389


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