BLASTX nr result

ID: Panax21_contig00021015 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00021015
         (488 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEO33926.1| hypothetical protein [Amblyomma maculatum]              85   5e-15
ref|NP_568440.1| uncharacterized protein [Arabidopsis thaliana] ...    82   5e-14
ref|XP_002872094.1| hypothetical protein ARALYDRAFT_489276 [Arab...    82   5e-14
ref|XP_002332733.1| predicted protein [Populus trichocarpa] gi|2...    81   1e-13
emb|CBI23146.3| unnamed protein product [Vitis vinifera]               80   1e-13

>gb|AEO33926.1| hypothetical protein [Amblyomma maculatum]
          Length = 105

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 46/97 (47%), Positives = 58/97 (59%), Gaps = 11/97 (11%)
 Frame = +3

Query: 42  KRIPRIKFPERQPNPKPSNSGLGLGSASQIQAAATKNGDNLDISIPS-----------SD 188
           KRIP IKFP+R P P PS+   G    S+ +   ++ G       PS           S+
Sbjct: 9   KRIPSIKFPQRHPKPSPSSPSSGTSPVSEQKVGISQFGFISQQKAPSPSANARNYRYSSE 68

Query: 189 VPTTPMNTAIGGKASLQPKRTPVSDKEIEAILLGGYF 299
           VP+ P NTA+GGKAS+ PKRTP+S+ EIEAILLGG F
Sbjct: 69  VPSPPTNTAVGGKASMLPKRTPLSENEIEAILLGGCF 105


>ref|NP_568440.1| uncharacterized protein [Arabidopsis thaliana]
           gi|21553990|gb|AAM63071.1| unknown [Arabidopsis
           thaliana] gi|28466789|gb|AAO44003.1| At5g24165
           [Arabidopsis thaliana] gi|110743430|dbj|BAE99601.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332005883|gb|AED93266.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 75

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 48/84 (57%), Positives = 55/84 (65%)
 Frame = +3

Query: 42  KRIPRIKFPERQPNPKPSNSGLGLGSASQIQAAATKNGDNLDISIPSSDVPTTPMNTAIG 221
           +RIPRIKFP+R  +   S SG   GS S ++   T           SSDVP  P NTA G
Sbjct: 2   RRIPRIKFPQR--HSISSGSGPAPGSVSGVKKNVTA----------SSDVPAAPKNTADG 49

Query: 222 GKASLQPKRTPVSDKEIEAILLGG 293
           GKASLQPKRTPVSDKEIE+I+LGG
Sbjct: 50  GKASLQPKRTPVSDKEIESIMLGG 73


>ref|XP_002872094.1| hypothetical protein ARALYDRAFT_489276 [Arabidopsis lyrata subsp.
           lyrata] gi|297317931|gb|EFH48353.1| hypothetical protein
           ARALYDRAFT_489276 [Arabidopsis lyrata subsp. lyrata]
          Length = 75

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 49/84 (58%), Positives = 53/84 (63%)
 Frame = +3

Query: 42  KRIPRIKFPERQPNPKPSNSGLGLGSASQIQAAATKNGDNLDISIPSSDVPTTPMNTAIG 221
           KRIPRIKFP+R       +   G GSA    A   KN         SSDVP  P NTA G
Sbjct: 2   KRIPRIKFPQRH------SISSGSGSAPGSVAGGKKN------VTASSDVPAAPKNTAEG 49

Query: 222 GKASLQPKRTPVSDKEIEAILLGG 293
           GKASLQPKRTPVSDKEIE+I+LGG
Sbjct: 50  GKASLQPKRTPVSDKEIESIMLGG 73


>ref|XP_002332733.1| predicted protein [Populus trichocarpa]
           gi|224118240|ref|XP_002317768.1| predicted protein
           [Populus trichocarpa] gi|118488727|gb|ABK96174.1|
           unknown [Populus trichocarpa]
           gi|222837543|gb|EEE75908.1| predicted protein [Populus
           trichocarpa] gi|222858441|gb|EEE95988.1| predicted
           protein [Populus trichocarpa]
          Length = 91

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 49/86 (56%), Positives = 60/86 (69%)
 Frame = +3

Query: 42  KRIPRIKFPERQPNPKPSNSGLGLGSASQIQAAATKNGDNLDISIPSSDVPTTPMNTAIG 221
           KRIPRIKFP+R  + K S+SG       Q QAA+T    +  I + SS+VP +P N A G
Sbjct: 13  KRIPRIKFPQR--HAKSSSSGF----VPQTQAASTDTEIHHFI-MSSSEVPASPANIAEG 65

Query: 222 GKASLQPKRTPVSDKEIEAILLGGYF 299
           GKASLQPKRTPVS++EIEA+ LGG F
Sbjct: 66  GKASLQPKRTPVSEREIEAVQLGGIF 91


>emb|CBI23146.3| unnamed protein product [Vitis vinifera]
          Length = 75

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 46/83 (55%), Positives = 52/83 (62%)
 Frame = +3

Query: 42  KRIPRIKFPERQPNPKPSNSGLGLGSASQIQAAATKNGDNLDISIPSSDVPTTPMNTAIG 221
           KRIPRIKFP+R P    S              A   N D   I   +S+VP  P+NTA+G
Sbjct: 2   KRIPRIKFPQRHPKSSAS--------------AMPTNEDAHLIFTSTSEVPAPPINTAMG 47

Query: 222 GKASLQPKRTPVSDKEIEAILLG 290
           GKASLQPKRTPVSD+EIEAILLG
Sbjct: 48  GKASLQPKRTPVSDREIEAILLG 70


Top