BLASTX nr result

ID: Panax21_contig00021001 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00021001
         (746 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI14966.3| unnamed protein product [Vitis vinifera]               83   5e-14
ref|XP_002277894.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    83   5e-14
emb|CAN78903.1| hypothetical protein VITISV_026451 [Vitis vinifera]    83   5e-14
ref|XP_004138092.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    82   9e-14
ref|XP_002322195.1| predicted protein [Populus trichocarpa] gi|2...    81   3e-13

>emb|CBI14966.3| unnamed protein product [Vitis vinifera]
          Length = 132

 Score = 83.2 bits (204), Expect = 5e-14
 Identities = 52/116 (44%), Positives = 55/116 (47%)
 Frame = +1

Query: 1   DVKDIKCVINYDFPSSLEDYVHXXXXXXXXXXXXXXXXXXXHSNTKHARDLIKILQEAGQ 180
           DVKDIKCVINYDFPSSLEDYVH                   HSN K ARDLIKILQEAGQ
Sbjct: 20  DVKDIKCVINYDFPSSLEDYVHRIGRTGRAGAKGTAITFFTHSNAKFARDLIKILQEAGQ 79

Query: 181 VVPVPLSSLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTIPLGAKMHW 348
           VV   LS++A                                   NTIPLGA+  W
Sbjct: 80  VVSPALSAMARSSGSAFGGSGGNFRSRGRGGSFGNRGLISGS---NTIPLGARRPW 132


>ref|XP_002277894.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 30-like [Vitis
           vinifera]
          Length = 611

 Score = 83.2 bits (204), Expect = 5e-14
 Identities = 52/116 (44%), Positives = 55/116 (47%)
 Frame = +1

Query: 1   DVKDIKCVINYDFPSSLEDYVHXXXXXXXXXXXXXXXXXXXHSNTKHARDLIKILQEAGQ 180
           DVKDIKCVINYDFPSSLEDYVH                   HSN K ARDLIKILQEAGQ
Sbjct: 499 DVKDIKCVINYDFPSSLEDYVHRIGRTGRAGAKGTAITFFTHSNAKFARDLIKILQEAGQ 558

Query: 181 VVPVPLSSLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTIPLGAKMHW 348
           VV   LS++A                                   NTIPLGA+  W
Sbjct: 559 VVSPALSAMARSSGSAFGGSGGNFRSRGRGGSFGNRGLISGS---NTIPLGARRPW 611


>emb|CAN78903.1| hypothetical protein VITISV_026451 [Vitis vinifera]
          Length = 692

 Score = 83.2 bits (204), Expect = 5e-14
 Identities = 52/116 (44%), Positives = 55/116 (47%)
 Frame = +1

Query: 1   DVKDIKCVINYDFPSSLEDYVHXXXXXXXXXXXXXXXXXXXHSNTKHARDLIKILQEAGQ 180
           DVKDIKCVINYDFPSSLEDYVH                   HSN K ARDLIKILQEAGQ
Sbjct: 580 DVKDIKCVINYDFPSSLEDYVHRIGRTGRAGAKGTAITFFTHSNAKFARDLIKILQEAGQ 639

Query: 181 VVPVPLSSLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTIPLGAKMHW 348
           VV   LS++A                                   NTIPLGA+  W
Sbjct: 640 VVSPALSAMARSSGSAFGGSGGNFRSRGRGGSFGNRGLISGS---NTIPLGARRPW 692


>ref|XP_004138092.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 30-like [Cucumis
           sativus] gi|449522189|ref|XP_004168110.1| PREDICTED:
           DEAD-box ATP-dependent RNA helicase 30-like [Cucumis
           sativus]
          Length = 622

 Score = 82.4 bits (202), Expect = 9e-14
 Identities = 42/70 (60%), Positives = 46/70 (65%)
 Frame = +1

Query: 1   DVKDIKCVINYDFPSSLEDYVHXXXXXXXXXXXXXXXXXXXHSNTKHARDLIKILQEAGQ 180
           DVKDIKCVIN+DFPSSLEDYVH                   H N KHARDLIKIL+EAGQ
Sbjct: 511 DVKDIKCVINFDFPSSLEDYVHRIGRTGRAGAKGTAFTFFTHENAKHARDLIKILREAGQ 570

Query: 181 VVPVPLSSLA 210
           +V   LS+LA
Sbjct: 571 IVTPALSALA 580


>ref|XP_002322195.1| predicted protein [Populus trichocarpa] gi|222869191|gb|EEF06322.1|
           predicted protein [Populus trichocarpa]
          Length = 450

 Score = 80.9 bits (198), Expect = 3e-13
 Identities = 41/69 (59%), Positives = 45/69 (65%)
 Frame = +1

Query: 1   DVKDIKCVINYDFPSSLEDYVHXXXXXXXXXXXXXXXXXXXHSNTKHARDLIKILQEAGQ 180
           DVKDIKCV+NYDFPSSLEDYVH                    SN K ARDLIKILQEAGQ
Sbjct: 378 DVKDIKCVVNYDFPSSLEDYVHRIGRTGRAGARGTALTFFTESNAKFARDLIKILQEAGQ 437

Query: 181 VVPVPLSSL 207
           +VP  LS++
Sbjct: 438 IVPPSLSAM 446


Top