BLASTX nr result

ID: Panax21_contig00020989 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020989
         (661 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514135.1| DNA binding protein, putative [Ricinus commu...    68   2e-09
ref|XP_002521373.1| transcription factor, putative [Ricinus comm...    67   4e-09
ref|XP_002308277.1| single myb histone [Populus trichocarpa] gi|...    64   2e-08
ref|XP_002281183.1| PREDICTED: uncharacterized protein LOC100254...    62   1e-07
emb|CCA29094.1| putative MYB transcription factor [Rosa rugosa] ...    61   2e-07

>ref|XP_002514135.1| DNA binding protein, putative [Ricinus communis]
           gi|223546591|gb|EEF48089.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 283

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 35/69 (50%), Positives = 40/69 (57%)
 Frame = +2

Query: 236 TSEEEEALKTGVAKHGTGKWKNILADPHFAPFLIQRARSDLM*LETDRLIEKGRSRDY*C 415
           T+EEEEAL+ GVAKHGTGKWKNI  DP F PFL  R+  DL         +K R+     
Sbjct: 9   TAEEEEALRAGVAKHGTGKWKNIQKDPEFNPFLFSRSNIDLK--------DKWRNMSVSA 60

Query: 416 ARSDRTPPP 442
               RTP P
Sbjct: 61  GEKSRTPKP 69


>ref|XP_002521373.1| transcription factor, putative [Ricinus communis]
           gi|223539451|gb|EEF41041.1| transcription factor,
           putative [Ricinus communis]
          Length = 349

 Score = 66.6 bits (161), Expect = 4e-09
 Identities = 31/41 (75%), Positives = 33/41 (80%)
 Frame = +2

Query: 236 TSEEEEALKTGVAKHGTGKWKNILADPHFAPFLIQRARSDL 358
           T+EEEEAL  GVAKHG GKWKNIL DP FAPFL QR+  DL
Sbjct: 87  TAEEEEALLNGVAKHGPGKWKNILKDPDFAPFLTQRSNIDL 127


>ref|XP_002308277.1| single myb histone [Populus trichocarpa]
           gi|222854253|gb|EEE91800.1| single myb histone [Populus
           trichocarpa]
          Length = 275

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 29/41 (70%), Positives = 32/41 (78%)
 Frame = +2

Query: 236 TSEEEEALKTGVAKHGTGKWKNILADPHFAPFLIQRARSDL 358
           TSEEEEAL+ GVAKHGTGKWKNI  DP F P+L  R+  DL
Sbjct: 9   TSEEEEALRAGVAKHGTGKWKNIQRDPEFNPYLYSRSNIDL 49


>ref|XP_002281183.1| PREDICTED: uncharacterized protein LOC100254369 [Vitis vinifera]
           gi|297738637|emb|CBI27882.3| unnamed protein product
           [Vitis vinifera]
          Length = 281

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 29/41 (70%), Positives = 31/41 (75%)
 Frame = +2

Query: 236 TSEEEEALKTGVAKHGTGKWKNILADPHFAPFLIQRARSDL 358
           TSEEEEAL+ GVAKHGTGKWKNI  DP F  FL  R+  DL
Sbjct: 9   TSEEEEALRAGVAKHGTGKWKNIQKDPEFNHFLFTRSNIDL 49


>emb|CCA29094.1| putative MYB transcription factor [Rosa rugosa]
           gi|327412629|emb|CCA29103.1| putative MYB transcription
           factor [Rosa rugosa]
          Length = 327

 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 28/41 (68%), Positives = 31/41 (75%)
 Frame = +2

Query: 236 TSEEEEALKTGVAKHGTGKWKNILADPHFAPFLIQRARSDL 358
           TSEEEEAL+ GV KHGTGKWK+I  DP F PFL  R+  DL
Sbjct: 9   TSEEEEALRAGVRKHGTGKWKDIQKDPEFNPFLSSRSNIDL 49


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