BLASTX nr result
ID: Panax21_contig00020979
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00020979 (677 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003527944.1| PREDICTED: SWI/SNF complex subunit SWI3C-lik... 292 4e-77 ref|XP_003522572.1| PREDICTED: SWI/SNF complex subunit SWI3C-lik... 292 4e-77 ref|XP_002284548.2| PREDICTED: SWI/SNF complex subunit SWI3C-lik... 291 8e-77 emb|CBI18988.3| unnamed protein product [Vitis vinifera] 291 8e-77 ref|XP_002306648.1| chromatin remodeling complex subunit [Populu... 288 7e-76 >ref|XP_003527944.1| PREDICTED: SWI/SNF complex subunit SWI3C-like [Glycine max] Length = 785 Score = 292 bits (748), Expect = 4e-77 Identities = 143/228 (62%), Positives = 168/228 (73%), Gaps = 4/228 (1%) Frame = +2 Query: 2 CNYCARPLPIMYYQSQKEVDVLLCLDCFHEGRFITGHSSLDFTRVDSGKDYGDLDGENWT 181 CNYC+ PLP++YYQSQKEVD+LLC DCFH+GRF+ GHSS+DF RVDS +DYG+LDG+NWT Sbjct: 341 CNYCSCPLPVVYYQSQKEVDILLCTDCFHDGRFVIGHSSIDFVRVDSTRDYGELDGDNWT 400 Query: 182 DQETLLLLEAMEIYSENWNEIAEHVGTKSKAQCILHFLRLPMDDSSLENVEVPSTPIPLN 361 DQETLLLLEAMEIY+ENWNEIAEHVGTKSKAQCILHFLRLPM+D EN+ VPS + N Sbjct: 401 DQETLLLLEAMEIYNENWNEIAEHVGTKSKAQCILHFLRLPMEDGKFENINVPSLSLSSN 460 Query: 362 ISKNDECERSHSNSNAAT-GSSLQDPDSDTRLPFANYANPVMALVAFLASAVGPRVXXXX 538 D+ R H SN T G Q DSD RLPFAN NPVMALVAFLASAVGPRV Sbjct: 461 AINRDDSGRLHCYSNGVTAGPVYQTRDSDHRLPFANSGNPVMALVAFLASAVGPRVAASC 520 Query: 539 XXXXXXXXXEEDHG---QIDGSGCGNRMNSENMHGKEGGPHGDITKSS 673 E++ G Q++ G NR NSE++H ++GGPH + S+ Sbjct: 521 AHAALAVLSEDNSGSTSQLEAPGHDNRTNSESIHYRDGGPHQETAVSN 568 >ref|XP_003522572.1| PREDICTED: SWI/SNF complex subunit SWI3C-like [Glycine max] Length = 785 Score = 292 bits (748), Expect = 4e-77 Identities = 143/227 (62%), Positives = 167/227 (73%), Gaps = 3/227 (1%) Frame = +2 Query: 2 CNYCARPLPIMYYQSQKEVDVLLCLDCFHEGRFITGHSSLDFTRVDSGKDYGDLDGENWT 181 CNYC+ PLP++YYQSQKEVD+LLC DCFH+GRF+ GHSS+DF RVDS +DYG+LDG++WT Sbjct: 340 CNYCSCPLPVVYYQSQKEVDILLCTDCFHDGRFVIGHSSIDFVRVDSTRDYGELDGDSWT 399 Query: 182 DQETLLLLEAMEIYSENWNEIAEHVGTKSKAQCILHFLRLPMDDSSLENVEVPSTPIPLN 361 DQETLLLLEAMEIY+ENWNEIAEHVGTKSKAQCILHFLRLPM+D LEN+ VPS + N Sbjct: 400 DQETLLLLEAMEIYNENWNEIAEHVGTKSKAQCILHFLRLPMEDGKLENINVPSMSLSSN 459 Query: 362 ISKNDECERSHSNSNAATGSSLQDPDSDTRLPFANYANPVMALVAFLASAVGPRVXXXXX 541 D R H SN T DSD RLPFAN NPVMALVAFLASAVGPRV Sbjct: 460 AINRDHSGRLHCYSNGDTA------DSDNRLPFANSGNPVMALVAFLASAVGPRVAASCA 513 Query: 542 XXXXXXXXEEDHG---QIDGSGCGNRMNSENMHGKEGGPHGDITKSS 673 E++ G Q++ G NR NSEN+H ++GGPHG+ S+ Sbjct: 514 HAALAVLSEDNSGSTSQMEAPGHDNRTNSENIHCRDGGPHGETAVSN 560 >ref|XP_002284548.2| PREDICTED: SWI/SNF complex subunit SWI3C-like [Vitis vinifera] Length = 771 Score = 291 bits (745), Expect = 8e-77 Identities = 150/234 (64%), Positives = 174/234 (74%), Gaps = 9/234 (3%) Frame = +2 Query: 2 CNYCARPLPIMYYQSQKEVDVLLCLDCFHEGRFITGHSSLDFTRVDSGKDYGDLDGENWT 181 CNYC+RPLPI YYQSQKEVDV+LC DCF+EGRF+TGHSS+DF R+DS KDYGD+D E+W+ Sbjct: 347 CNYCSRPLPIGYYQSQKEVDVMLCTDCFYEGRFVTGHSSIDFIRLDSTKDYGDIDSESWS 406 Query: 182 DQETLLLLEAMEIYSENWNEIAEHVGTKSKAQCILHFLRLPMDDSSLENVEVPSTPIPLN 361 DQETLLLLEAME Y+ENWN+IAEHVGTKSKAQCILHF+R+PM+D LEN+EVPS P N Sbjct: 407 DQETLLLLEAMESYNENWNDIAEHVGTKSKAQCILHFIRMPMEDGLLENIEVPSMPTLSN 466 Query: 362 ISKNDECERSHSNSNA-ATGSSLQDPDSDTRLPFANYANPVMALVAFLASAVGPRVXXXX 538 + ERSHSNSN GS L DSD+RLPFAN NPVM++VAFLA+AVGPRV Sbjct: 467 SLNKVDQERSHSNSNGNLAGSCLPGLDSDSRLPFANSGNPVMSMVAFLATAVGPRVAAAC 526 Query: 539 XXXXXXXXXEED-----HGQI---DGSGCGNRMNSENMHGKEGGPHGDITKSSQ 676 EE+ G I +GSG GNRM KEGGPHG++T SSQ Sbjct: 527 AHASLIALSEENALAAASGFIIPPEGSGHGNRM-------KEGGPHGELTNSSQ 573 >emb|CBI18988.3| unnamed protein product [Vitis vinifera] Length = 675 Score = 291 bits (745), Expect = 8e-77 Identities = 150/234 (64%), Positives = 174/234 (74%), Gaps = 9/234 (3%) Frame = +2 Query: 2 CNYCARPLPIMYYQSQKEVDVLLCLDCFHEGRFITGHSSLDFTRVDSGKDYGDLDGENWT 181 CNYC+RPLPI YYQSQKEVDV+LC DCF+EGRF+TGHSS+DF R+DS KDYGD+D E+W+ Sbjct: 229 CNYCSRPLPIGYYQSQKEVDVMLCTDCFYEGRFVTGHSSIDFIRLDSTKDYGDIDSESWS 288 Query: 182 DQETLLLLEAMEIYSENWNEIAEHVGTKSKAQCILHFLRLPMDDSSLENVEVPSTPIPLN 361 DQETLLLLEAME Y+ENWN+IAEHVGTKSKAQCILHF+R+PM+D LEN+EVPS P N Sbjct: 289 DQETLLLLEAMESYNENWNDIAEHVGTKSKAQCILHFIRMPMEDGLLENIEVPSMPTLSN 348 Query: 362 ISKNDECERSHSNSNA-ATGSSLQDPDSDTRLPFANYANPVMALVAFLASAVGPRVXXXX 538 + ERSHSNSN GS L DSD+RLPFAN NPVM++VAFLA+AVGPRV Sbjct: 349 SLNKVDQERSHSNSNGNLAGSCLPGLDSDSRLPFANSGNPVMSMVAFLATAVGPRVAAAC 408 Query: 539 XXXXXXXXXEED-----HGQI---DGSGCGNRMNSENMHGKEGGPHGDITKSSQ 676 EE+ G I +GSG GNRM KEGGPHG++T SSQ Sbjct: 409 AHASLIALSEENALAAASGFIIPPEGSGHGNRM-------KEGGPHGELTNSSQ 455 >ref|XP_002306648.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222856097|gb|EEE93644.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 796 Score = 288 bits (737), Expect = 7e-76 Identities = 141/225 (62%), Positives = 170/225 (75%) Frame = +2 Query: 2 CNYCARPLPIMYYQSQKEVDVLLCLDCFHEGRFITGHSSLDFTRVDSGKDYGDLDGENWT 181 CN+C++ LP + YQSQKEVD+LLC DCFHEGRF+TGHSSLDF +VDS KDYGD+DGE+W+ Sbjct: 359 CNHCSQLLPSVCYQSQKEVDILLCPDCFHEGRFVTGHSSLDFIKVDSTKDYGDIDGESWS 418 Query: 182 DQETLLLLEAMEIYSENWNEIAEHVGTKSKAQCILHFLRLPMDDSSLENVEVPSTPIPLN 361 DQETLLLLEAMEIY+ENWNEIAEHVG+KSKAQCILHFLRLP++D LEN+EVPS P ++ Sbjct: 419 DQETLLLLEAMEIYNENWNEIAEHVGSKSKAQCILHFLRLPVEDGLLENIEVPSMPKSIS 478 Query: 362 ISKNDECERSHSNSNAATGSSLQDPDSDTRLPFANYANPVMALVAFLASAVGPRVXXXXX 541 S ++ R HS+SN GS LQ D++ RLPFAN NPVMALVAFLASAVGPRV Sbjct: 479 PSNREDNRRPHSSSN---GSCLQGADAENRLPFANSGNPVMALVAFLASAVGPRVAAACA 535 Query: 542 XXXXXXXXEEDHGQIDGSGCGNRMNSENMHGKEGGPHGDITKSSQ 676 H ++ NR+ SE +HG+EGG HG++ S Q Sbjct: 536 -----------HASLEALSADNRLGSERLHGREGGFHGEVANSIQ 569