BLASTX nr result

ID: Panax21_contig00020978 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020978
         (538 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306434.1| predicted protein [Populus trichocarpa] gi|2...   116   2e-24
ref|XP_002521727.1| conserved hypothetical protein [Ricinus comm...   110   1e-22
emb|CAN64708.1| hypothetical protein VITISV_043723 [Vitis vinifera]   106   2e-21
emb|CAN80127.1| hypothetical protein VITISV_041591 [Vitis vinifera]    90   2e-16
ref|XP_002272793.2| PREDICTED: uncharacterized protein LOC100240...    90   2e-16

>ref|XP_002306434.1| predicted protein [Populus trichocarpa] gi|222855883|gb|EEE93430.1|
           predicted protein [Populus trichocarpa]
          Length = 896

 Score =  116 bits (291), Expect = 2e-24
 Identities = 82/198 (41%), Positives = 95/198 (47%), Gaps = 21/198 (10%)
 Frame = +3

Query: 3   VAQSKRDLTPDIVRAALYGPASAKIPAPQINLAALPMPLPNTRAGAPNPQFSGTVPMQSQ 182
           VAQSKR+LTP+IV+AALYGPASAKIPAPQINLAA P P    +  AP PQ SGT P  S 
Sbjct: 71  VAQSKRELTPEIVKAALYGPASAKIPAPQINLAATPAP----KTVAPAPQLSGTTPASSP 126

Query: 183 TTGI---------------XXXXXXXXXXXXXXXXXXXXXINAFHPHHGVASRGMHGGDT 317
             GI                                     ++ HP   + S+GM  G T
Sbjct: 127 NVGIRPPQVPGNAVTNQQYFPSQQGQFTRQPQPQTQAMPPNSSSHPQQILVSQGMPRGGT 186

Query: 318 MXXXXXXXXXXXXTDWLGRGTGVSPAGITSQVPS------TTQDGFGPATSGLTTSVQPR 479
           +            TDWLG     S AG+TSQ PS       TQDGFG +  G T SVQPR
Sbjct: 187 V-VAPRPLNSNISTDWLGG----SAAGLTSQGPSRGIGHPATQDGFGLSAPGFTPSVQPR 241

Query: 480 LEATTSITQPAAPKPNDA 533
            + T        PKP +A
Sbjct: 242 PQVTAGQIAAPTPKPQEA 259


>ref|XP_002521727.1| conserved hypothetical protein [Ricinus communis]
           gi|223539118|gb|EEF40714.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 595

 Score =  110 bits (276), Expect = 1e-22
 Identities = 75/193 (38%), Positives = 92/193 (47%), Gaps = 16/193 (8%)
 Frame = +3

Query: 3   VAQSKRDLTPDIVRAALYGPASAKIPAPQINLAALPMP---LPNTRAGAPNPQFSGTVPM 173
           VAQSKRDLTPD+ +AALYGPASAKIPAPQINLAA P P    P  RA  P PQ +GT  +
Sbjct: 71  VAQSKRDLTPDMAKAALYGPASAKIPAPQINLAATPAPRAAAPAPRAATPAPQIAGTTSV 130

Query: 174 QSQTTGIXXXXXXXXXXXXXXXXXXXXX----------INAF-HPHHGVASRGMHGGDTM 320
            SQ  GI                               +N+  HP   +A++G+  G  M
Sbjct: 131 ASQNIGIRPPQVPVNASTNQQYFPPQQNQFMRPPQGMPVNSMSHPQQMLANQGVPRGGNM 190

Query: 321 XXXXXXXXXXXXTDWLGRGTGVSPAGITSQ--VPSTTQDGFGPATSGLTTSVQPRLEATT 494
                       T W G   G       S+  +P  T+DGFG   SG+T S+QPR + T+
Sbjct: 191 TAPRLPNSNVS-TGWPGGSLGTETTQNQSRGVIPPATRDGFGLMASGITPSMQPRPQVTS 249

Query: 495 SITQPAAPKPNDA 533
             T      P DA
Sbjct: 250 GQTPSTTTTPQDA 262


>emb|CAN64708.1| hypothetical protein VITISV_043723 [Vitis vinifera]
          Length = 1120

 Score =  106 bits (264), Expect = 2e-21
 Identities = 79/191 (41%), Positives = 94/191 (49%), Gaps = 20/191 (10%)
 Frame = +3

Query: 3   VAQSKRDLTPDIVRAALYGPASAKIPAPQINLAALPMPLPNTRAGAPNP--QFSGTVPMQ 176
           VAQSKR+LTPDIV+AALYGPA+AKIPAPQINLAA P P  NT A AP P        P  
Sbjct: 97  VAQSKRELTPDIVKAALYGPAAAKIPAPQINLAAAPTPQMNTAAPAPAPVPPMGSVAPTA 156

Query: 177 SQTTGIXXXXXXXXXXXXXXXXXXXXXI----------NAFHPHHGVASRGMHGGDTMXX 326
           SQ   +                                +A  P  G A +G  GG TM  
Sbjct: 157 SQNFXVRGPQGPISANVNQQYFPPQGNQLMRPTQTLPGSASLPAQGAAVQGFPGGGTMAG 216

Query: 327 XXXXXXXXXXTDWLGRGTGVSPAGITSQVP------STTQDGFGPATSGLTTSVQPRLEA 488
                      D +G  TG +P GI +QVP      S +QDGFG + SGLT SV  + + 
Sbjct: 217 MRLPNSSXS-NDLVGGRTGGAPTGIXAQVPIRGVSPSMSQDGFGVSPSGLTASVPSKPQV 275

Query: 489 TTSIT--QPAA 515
            + IT  +PAA
Sbjct: 276 GSGITSLEPAA 286


>emb|CAN80127.1| hypothetical protein VITISV_041591 [Vitis vinifera]
          Length = 1186

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 61/168 (36%), Positives = 74/168 (44%), Gaps = 10/168 (5%)
 Frame = +3

Query: 3   VAQSKRDLTPDIVRAALYGPASAKIPAPQINLAALPMPLPNTRAGAPNPQFSGTVPMQSQ 182
           VAQSKR+LTPDIV+AALYGPA+AKIPAPQINLAA+P P PN     P PQ     P  SQ
Sbjct: 156 VAQSKRELTPDIVKAALYGPAAAKIPAPQINLAAIPSPQPNQMTTTPAPQMGAVAPTASQ 215

Query: 183 TTGIXXXXXXXXXXXXXXXXXXXXXI----------NAFHPHHGVASRGMHGGDTMXXXX 332
             G                                 +A  P   +A   ++ G  M    
Sbjct: 216 NLGFRGQTLPNPSTNQQYFPSQQNQFMRPPQPMPAGSASRPXQNLAGPELNRGGNM-VGP 274

Query: 333 XXXXXXXXTDWLGRGTGVSPAGITSQVPSTTQDGFGPATSGLTTSVQP 476
                   +DWL   T  +P G  SQVP+           G+T S+ P
Sbjct: 275 GVPNSNISSDWLSGRTAGAPTGPLSQVPN----------RGITPSMPP 312


>ref|XP_002272793.2| PREDICTED: uncharacterized protein LOC100240982 [Vitis vinifera]
          Length = 984

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 61/168 (36%), Positives = 74/168 (44%), Gaps = 10/168 (5%)
 Frame = +3

Query: 3   VAQSKRDLTPDIVRAALYGPASAKIPAPQINLAALPMPLPNTRAGAPNPQFSGTVPMQSQ 182
           VAQSKR+LTPDIV+AALYGPA+AKIPAPQINLAA+P P PN     P PQ     P  SQ
Sbjct: 67  VAQSKRELTPDIVKAALYGPAAAKIPAPQINLAAIPSPQPNQMTTTPAPQMGAVAPTASQ 126

Query: 183 TTGIXXXXXXXXXXXXXXXXXXXXXI----------NAFHPHHGVASRGMHGGDTMXXXX 332
             G                                 +A  P   +A   ++ G  M    
Sbjct: 127 NLGFRGQTLPNPSTNQQYFPSQQNQFMRPPQPMPAGSASRPPQNLAGPELNRGGNM-VGP 185

Query: 333 XXXXXXXXTDWLGRGTGVSPAGITSQVPSTTQDGFGPATSGLTTSVQP 476
                   +DWL   T  +P G  SQVP+           G+T S+ P
Sbjct: 186 GVPNSNISSDWLSGRTAGAPTGPLSQVPN----------RGITPSMPP 223


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