BLASTX nr result

ID: Panax21_contig00020965 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020965
         (421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529957.1| Non-structural maintenance of chromosome ele...   124   8e-27
ref|XP_002304893.1| predicted protein [Populus trichocarpa] gi|2...   117   1e-24
emb|CBI30028.3| unnamed protein product [Vitis vinifera]              114   6e-24
ref|XP_002279026.1| PREDICTED: non-structural maintenance of chr...   114   6e-24
ref|XP_002323286.1| predicted protein [Populus trichocarpa] gi|2...   113   1e-23

>ref|XP_002529957.1| Non-structural maintenance of chromosome element, putative [Ricinus
           communis] gi|223530555|gb|EEF32434.1| Non-structural
           maintenance of chromosome element, putative [Ricinus
           communis]
          Length = 391

 Score =  124 bits (311), Expect = 8e-27
 Identities = 68/135 (50%), Positives = 85/135 (62%)
 Frame = +3

Query: 3   LFALSFLVKDGRVEIVMDENGSHIVSPRNXXXXXXXXXGEVRYNAFIFRFDFKDWKLIVD 182
           LFALSFLVKDGRVEI++D +G H+VSPRN         GEV Y  F+FRFDFKDWK+++D
Sbjct: 258 LFALSFLVKDGRVEIIVDGSGHHLVSPRNAPAASSVMSGEVAYRHFVFRFDFKDWKVMMD 317

Query: 183 QVPEGQELIPNRVNSHISACTQPEPVTICSQPEPVATCSQAALSTIPMAIPIKTYSRNRG 362
            VP+G EL+P+R NS     ++ EP T  SQ     T             PI+   RNRG
Sbjct: 318 MVPQGDELMPDRKNS----VSETEPETNISQGNTNRT-------------PIRKLCRNRG 360

Query: 363 LVIQKHSFLEGSPEI 407
           LV+Q+ S +E SPEI
Sbjct: 361 LVVQEDSVVEDSPEI 375


>ref|XP_002304893.1| predicted protein [Populus trichocarpa] gi|222842325|gb|EEE79872.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score =  117 bits (292), Expect = 1e-24
 Identities = 67/136 (49%), Positives = 86/136 (63%), Gaps = 1/136 (0%)
 Frame = +3

Query: 3   LFALSFLVKDGRVEIVMDENGSHIVSPRNXXXXXXXXXGEVRYNAFIFRFDFKDWKLIVD 182
           LFALSFLVKDGRV+IV+DE+G H VSPRN         GEV Y  F+FRFDF+DWKL+  
Sbjct: 255 LFALSFLVKDGRVKIVVDESGCHFVSPRNAPAPSSVMSGEVAYRHFVFRFDFRDWKLMKG 314

Query: 183 QVPEGQELIPNRVNSHISACTQPEPVTICSQPEPVATCSQAALSTIPMAIPIKTYSRNRG 362
            VP+G+EL+P+R +S              SQ EP A  ++   S      PI+ +SRNRG
Sbjct: 315 VVPDGEELMPHRESSG------------ASQVEPDANNTEGTRS----RTPIRKFSRNRG 358

Query: 363 LVIQKHS-FLEGSPEI 407
           LV+Q+ S  +E SP+I
Sbjct: 359 LVVQEDSVVVEDSPDI 374


>emb|CBI30028.3| unnamed protein product [Vitis vinifera]
          Length = 452

 Score =  114 bits (286), Expect = 6e-24
 Identities = 64/134 (47%), Positives = 80/134 (59%)
 Frame = +3

Query: 3   LFALSFLVKDGRVEIVMDENGSHIVSPRNXXXXXXXXXGEVRYNAFIFRFDFKDWKLIVD 182
           LFALSFLVKDGR EI +D  G H+VSPRN         GEV YN F+FRFDFKDWKL+  
Sbjct: 310 LFALSFLVKDGRAEITVDGRGCHLVSPRNAPAANAVVSGEVCYNHFVFRFDFKDWKLMAT 369

Query: 183 QVPEGQELIPNRVNSHISACTQPEPVTICSQPEPVATCSQAALSTIPMAIPIKTYSRNRG 362
            V  G+EL+P R + ++   +Q + V           C  AA  T     PI+  SRNRG
Sbjct: 370 SVGAGEELMPQRNSVNLPNNSQTDSV--------AEECEAAAAPT----TPIRKLSRNRG 417

Query: 363 LVIQKHSFLEGSPE 404
           LV+Q+ + +E SPE
Sbjct: 418 LVLQEQAVVEDSPE 431


>ref|XP_002279026.1| PREDICTED: non-structural maintenance of chromosome element 4
           [Vitis vinifera]
          Length = 380

 Score =  114 bits (286), Expect = 6e-24
 Identities = 64/134 (47%), Positives = 80/134 (59%)
 Frame = +3

Query: 3   LFALSFLVKDGRVEIVMDENGSHIVSPRNXXXXXXXXXGEVRYNAFIFRFDFKDWKLIVD 182
           LFALSFLVKDGR EI +D  G H+VSPRN         GEV YN F+FRFDFKDWKL+  
Sbjct: 238 LFALSFLVKDGRAEITVDGRGCHLVSPRNAPAANAVVSGEVCYNHFVFRFDFKDWKLMAT 297

Query: 183 QVPEGQELIPNRVNSHISACTQPEPVTICSQPEPVATCSQAALSTIPMAIPIKTYSRNRG 362
            V  G+EL+P R + ++   +Q + V           C  AA  T     PI+  SRNRG
Sbjct: 298 SVGAGEELMPQRNSVNLPNNSQTDSV--------AEECEAAAAPT----TPIRKLSRNRG 345

Query: 363 LVIQKHSFLEGSPE 404
           LV+Q+ + +E SPE
Sbjct: 346 LVLQEQAVVEDSPE 359


>ref|XP_002323286.1| predicted protein [Populus trichocarpa] gi|222867916|gb|EEF05047.1|
           predicted protein [Populus trichocarpa]
          Length = 313

 Score =  113 bits (283), Expect = 1e-23
 Identities = 60/132 (45%), Positives = 82/132 (62%)
 Frame = +3

Query: 3   LFALSFLVKDGRVEIVMDENGSHIVSPRNXXXXXXXXXGEVRYNAFIFRFDFKDWKLIVD 182
           LFALSFLVKDGR EI ++ENG H+VSPRN         GEV Y  F+FRFDFKDWKL++ 
Sbjct: 190 LFALSFLVKDGRAEIKVNENGWHLVSPRNAPDAGKVVSGEVAYRHFVFRFDFKDWKLMIS 249

Query: 183 QVPEGQELIPNRVNSHISACTQPEPVTICSQPEPVATCSQAALSTIPMAIPIKTYSRNRG 362
            V  G+EL+PNR   ++ + +  +P+ + +Q     T             PI+ +SRNRG
Sbjct: 250 AVEVGEELMPNRNQINMPSDSLADPIPVETQAGGPTT-------------PIRKFSRNRG 296

Query: 363 LVIQKHSFLEGS 398
           LV+Q+ + +E S
Sbjct: 297 LVLQEKTVVEDS 308


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