BLASTX nr result

ID: Panax21_contig00020964 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020964
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275787.1| PREDICTED: putative chromatin-remodeling com...   170   1e-55
ref|XP_003631977.1| PREDICTED: putative chromatin-remodeling com...   170   1e-55
ref|XP_004160200.1| PREDICTED: LOW QUALITY PROTEIN: putative chr...   169   8e-55
ref|XP_004150811.1| PREDICTED: putative chromatin-remodeling com...   169   8e-55
ref|XP_002968018.1| hypothetical protein SELMODRAFT_440203 [Sela...   153   2e-49

>ref|XP_002275787.1| PREDICTED: putative chromatin-remodeling complex ATPase chain
           isoform 1 [Vitis vinifera] gi|297736902|emb|CBI26103.3|
           unnamed protein product [Vitis vinifera]
          Length = 1080

 Score =  170 bits (431), Expect(2) = 1e-55
 Identities = 80/90 (88%), Positives = 85/90 (94%)
 Frame = +3

Query: 3   GKMRDYQLVGLNWLVHLYENGINGILADEMGLGKTLQTISLLGYLHGFRGITGPYMVVTP 182
           GKMRDYQL GLNWL+ LYENGINGILADEMGLGKTLQTISLLGYLH FRGITGP+MVV P
Sbjct: 202 GKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFRGITGPHMVVAP 261

Query: 183 KSTLGNWMNDIRRFFPVLRAVEFLGNPEER 272
           KSTLGNWMN+IRRF PVLRAV+FLGNP+ER
Sbjct: 262 KSTLGNWMNEIRRFCPVLRAVKFLGNPDER 291



 Score = 71.2 bits (173), Expect(2) = 1e-55
 Identities = 35/44 (79%), Positives = 37/44 (84%)
 Frame = +1

Query: 256 EILKNDFEMAIKEKTALRCFSWRYIIIDEAHRIKIENSLLSKTM 387
           ++    FEMAIKEKT LR FSWRYIIIDEAHRIK ENSLLSKTM
Sbjct: 305 DVCVTSFEMAIKEKTTLRRFSWRYIIIDEAHRIKNENSLLSKTM 348


>ref|XP_003631977.1| PREDICTED: putative chromatin-remodeling complex ATPase chain
           isoform 2 [Vitis vinifera]
          Length = 1068

 Score =  170 bits (431), Expect(2) = 1e-55
 Identities = 80/90 (88%), Positives = 85/90 (94%)
 Frame = +3

Query: 3   GKMRDYQLVGLNWLVHLYENGINGILADEMGLGKTLQTISLLGYLHGFRGITGPYMVVTP 182
           GKMRDYQL GLNWL+ LYENGINGILADEMGLGKTLQTISLLGYLH FRGITGP+MVV P
Sbjct: 190 GKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFRGITGPHMVVAP 249

Query: 183 KSTLGNWMNDIRRFFPVLRAVEFLGNPEER 272
           KSTLGNWMN+IRRF PVLRAV+FLGNP+ER
Sbjct: 250 KSTLGNWMNEIRRFCPVLRAVKFLGNPDER 279



 Score = 71.2 bits (173), Expect(2) = 1e-55
 Identities = 35/44 (79%), Positives = 37/44 (84%)
 Frame = +1

Query: 256 EILKNDFEMAIKEKTALRCFSWRYIIIDEAHRIKIENSLLSKTM 387
           ++    FEMAIKEKT LR FSWRYIIIDEAHRIK ENSLLSKTM
Sbjct: 293 DVCVTSFEMAIKEKTTLRRFSWRYIIIDEAHRIKNENSLLSKTM 336


>ref|XP_004160200.1| PREDICTED: LOW QUALITY PROTEIN: putative chromatin-remodeling
           complex ATPase chain-like [Cucumis sativus]
          Length = 1073

 Score =  169 bits (428), Expect(2) = 8e-55
 Identities = 79/90 (87%), Positives = 85/90 (94%)
 Frame = +3

Query: 3   GKMRDYQLVGLNWLVHLYENGINGILADEMGLGKTLQTISLLGYLHGFRGITGPYMVVTP 182
           GKMRDYQL GLNWL+ LYENGINGILADEMGLGKTLQTISLLGYLH +RGITGP+MVV P
Sbjct: 196 GKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEYRGITGPHMVVAP 255

Query: 183 KSTLGNWMNDIRRFFPVLRAVEFLGNPEER 272
           KSTLGNWMN+IRRF PVLRAV+FLGNP+ER
Sbjct: 256 KSTLGNWMNEIRRFCPVLRAVKFLGNPDER 285



 Score = 69.7 bits (169), Expect(2) = 8e-55
 Identities = 34/44 (77%), Positives = 37/44 (84%)
 Frame = +1

Query: 256 EILKNDFEMAIKEKTALRCFSWRYIIIDEAHRIKIENSLLSKTM 387
           ++    FEMAIKEK+ LR FSWRYIIIDEAHRIK ENSLLSKTM
Sbjct: 299 DVCVTSFEMAIKEKSCLRRFSWRYIIIDEAHRIKNENSLLSKTM 342


>ref|XP_004150811.1| PREDICTED: putative chromatin-remodeling complex ATPase chain-like
           [Cucumis sativus]
          Length = 1073

 Score =  169 bits (428), Expect(2) = 8e-55
 Identities = 79/90 (87%), Positives = 85/90 (94%)
 Frame = +3

Query: 3   GKMRDYQLVGLNWLVHLYENGINGILADEMGLGKTLQTISLLGYLHGFRGITGPYMVVTP 182
           GKMRDYQL GLNWL+ LYENGINGILADEMGLGKTLQTISLLGYLH +RGITGP+MVV P
Sbjct: 196 GKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEYRGITGPHMVVAP 255

Query: 183 KSTLGNWMNDIRRFFPVLRAVEFLGNPEER 272
           KSTLGNWMN+IRRF PVLRAV+FLGNP+ER
Sbjct: 256 KSTLGNWMNEIRRFCPVLRAVKFLGNPDER 285



 Score = 69.7 bits (169), Expect(2) = 8e-55
 Identities = 34/44 (77%), Positives = 37/44 (84%)
 Frame = +1

Query: 256 EILKNDFEMAIKEKTALRCFSWRYIIIDEAHRIKIENSLLSKTM 387
           ++    FEMAIKEK+ LR FSWRYIIIDEAHRIK ENSLLSKTM
Sbjct: 299 DVCVTSFEMAIKEKSCLRRFSWRYIIIDEAHRIKNENSLLSKTM 342


>ref|XP_002968018.1| hypothetical protein SELMODRAFT_440203 [Selaginella moellendorffii]
           gi|300164756|gb|EFJ31365.1| hypothetical protein
           SELMODRAFT_440203 [Selaginella moellendorffii]
          Length = 1234

 Score =  153 bits (387), Expect(2) = 2e-49
 Identities = 73/90 (81%), Positives = 79/90 (87%)
 Frame = +3

Query: 3   GKMRDYQLVGLNWLVHLYENGINGILADEMGLGKTLQTISLLGYLHGFRGITGPYMVVTP 182
           GKMRDYQL GLNWL+ LYENGINGILADEMGLGKTLQTISLL YLH  RGI+GP+MVV P
Sbjct: 198 GKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHESRGISGPHMVVAP 257

Query: 183 KSTLGNWMNDIRRFFPVLRAVEFLGNPEER 272
           KSTLGNWMN+IRRF PVLRA +F G  +ER
Sbjct: 258 KSTLGNWMNEIRRFCPVLRAFKFHGTQDER 287



 Score = 67.4 bits (163), Expect(2) = 2e-49
 Identities = 32/44 (72%), Positives = 37/44 (84%)
 Frame = +1

Query: 256 EILKNDFEMAIKEKTALRCFSWRYIIIDEAHRIKIENSLLSKTM 387
           ++    FEMAIKE+ AL+ FSWRYIIIDEAHRIK ENSLL+KTM
Sbjct: 301 DVCVTSFEMAIKERAALKKFSWRYIIIDEAHRIKNENSLLAKTM 344


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