BLASTX nr result

ID: Panax21_contig00020962 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020962
         (1028 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38318.3| unnamed protein product [Vitis vinifera]              232   1e-58
emb|CAN65690.1| hypothetical protein VITISV_022466 [Vitis vinifera]   223   5e-56
ref|XP_003590880.1| F-box protein PP2-B1 [Medicago truncatula] g...   223   6e-56
gb|ABK94787.1| unknown [Populus trichocarpa]                          222   1e-55
ref|XP_002279245.1| PREDICTED: F-box protein PP2-B15 [Vitis vini...   220   4e-55

>emb|CBI38318.3| unnamed protein product [Vitis vinifera]
          Length = 287

 Score =  232 bits (591), Expect = 1e-58
 Identities = 123/273 (45%), Positives = 178/273 (65%), Gaps = 13/273 (4%)
 Frame = +2

Query: 83  FSDLPEGCLSEILSLTSPWDAFRASSISRGFRTAADSDGVWDRFLPSNYLDIIARSVSPV 262
           FS LPEGC++++L+LTSP D  R S+++  F +AA+SD +W+RFLP++Y +IIARS    
Sbjct: 20  FSSLPEGCIADVLALTSPRDVCRMSAVASVFLSAAESDALWERFLPADYREIIARSSESS 79

Query: 263 N---YVTEKQFYFLLCDSPILLDDGNLSFYLDKKSGKKCDMLGARQLSISWGDTSLYWRW 433
           +   + ++K+ YF LCD P+L+D+G  SF+L+K+SGKKC ML +R+L+I WGDT  YW W
Sbjct: 80  SWRHFSSKKELYFTLCDYPLLIDEGKKSFWLEKRSGKKCYMLASRELTIIWGDTPGYWEW 139

Query: 434 APHMHSRFSEVAELLSF-WLDIRGKINTQILSPKTIYETYLVYTLANRSYGL--VFARTS 604
                SRF EVA L +  W +IRGKINT +LSP+T Y  YLV+  A RS+G   V   +S
Sbjct: 140 TSLPESRFPEVAYLQAVCWFEIRGKINTCMLSPRTNYAAYLVFH-AGRSHGFEDVPVESS 198

Query: 605 VRFVNERDDVPWVECNTVYI-------QPRKSVRNNQNVEFRRNRKDGWMEIKTGEFIND 763
           +  V             +Y+       +P  S+R+  ++ + + R+D W EI+ GEF  +
Sbjct: 199 IEIVGNE-----TTTRVIYLARYRKNEEPTSSIRS--DLPYPKKREDSWFEIELGEFFIE 251

Query: 764 GGDDGEVEMRFMEIERLHAKSGLLVEGIEFRPK 862
           GG+D E+E+  ME++  H K GL+VEGIE RPK
Sbjct: 252 GGEDTELEITLMEVKAGHWKDGLIVEGIEIRPK 284


>emb|CAN65690.1| hypothetical protein VITISV_022466 [Vitis vinifera]
          Length = 277

 Score =  223 bits (569), Expect = 5e-56
 Identities = 121/278 (43%), Positives = 170/278 (61%), Gaps = 16/278 (5%)
 Frame = +2

Query: 80  SFSDLPEGCLSEILSLTSPWDAFRASSISRGFRTAADSDGVWDRFLPSNYLDIIARSVSP 259
           +F  LP+ C+S ILS TSP DA R+  +S   R A DSD VW++FLPS+Y +I++R VSP
Sbjct: 2   NFELLPQDCISHILSCTSPRDACRSELVSTTVRHAGDSDSVWEKFLPSDYQEILSRLVSP 61

Query: 260 VNYVTEKQFYFLLCDSPILLDDGNLSFYLDKKSGKKCDMLGARQLSISWGDTSLYWRWAP 439
           + + ++K+ Y  LC SP+L+D+G  SF + K +GKK  ML AR LSI+W   +LYW W P
Sbjct: 62  LVFASKKELYSKLC-SPLLIDEGRKSFSISKTTGKKGYMLSARNLSITWSSNTLYWSWKP 120

Query: 440 HMHSRFSEVAELLSF-WLDIRGKINTQILSPKTIYETYLVYTLANRSYGLVFARTSVRFV 616
            + SRF+E  EL +  WL+I+GKI+T +LSPKT Y  YL+   A+R+YGL    + V  V
Sbjct: 121 LLQSRFAETVELRTICWLEIQGKISTSVLSPKTTYRAYLIVKFADRAYGLDSLPSEVSVV 180

Query: 617 -------------NERDDVPWVE--CNTVYIQPRKSVRNNQNVEFRRNRKDGWMEIKTGE 751
                            + P +E  C    I+  +S  +         R+DGW E++ GE
Sbjct: 181 VGKHQSQGIAYLRRPESNRPALERVCFLNRIEALRSKVSKGEERVPYEREDGWFEVELGE 240

Query: 752 FINDGGDDGEVEMRFMEIERLHAKSGLLVEGIEFRPKE 865
           F NDGGD+ EV+    E++ +H K GL+VEGIE RPK+
Sbjct: 241 FYNDGGDE-EVKTSLREVKGVHLKGGLIVEGIEIRPKD 277


>ref|XP_003590880.1| F-box protein PP2-B1 [Medicago truncatula]
           gi|355479928|gb|AES61131.1| F-box protein PP2-B1
           [Medicago truncatula]
          Length = 275

 Score =  223 bits (568), Expect = 6e-56
 Identities = 128/283 (45%), Positives = 166/283 (58%), Gaps = 20/283 (7%)
 Frame = +2

Query: 77  TSFSDLPEGCLSEILSLTSPWDAFRASSISRGFRTAADSDGVWDRFLPSNYLDIIARSVS 256
           T+F +LPEGC++ +LS T+P DA R S IS+ F +A+DSD VW+RFLPS+   II++  S
Sbjct: 2   TAFEELPEGCIAAVLSSTTPVDACRLSFISKNFLSASDSDAVWNRFLPSDISSIISQFPS 61

Query: 257 PVNYVTEKQFYFLLCDSPILLDDGNLSFYLDKKSGKKCDMLGARQLSISWGDTSLYWRWA 436
             N  T+K  Y  L D PI++D+G  SF L++KSGKKC ML AR L+I+WGDT  YW W 
Sbjct: 62  LSNIPTKKDLYIALSDRPIIIDNGKKSFQLERKSGKKCYMLSARSLAITWGDTDQYWNWT 121

Query: 437 PHMHSRFSEVAELLSF-WLDIRGKINTQILSPKTIYETYLVYTLANR----------SYG 583
               SRF EVAELL   WL+IRGK+NT  LSP T Y TYLV+ + N           S G
Sbjct: 122 VMPESRFPEVAELLHVCWLEIRGKLNTLALSPNTRYVTYLVFKMINAYGFEYFPVELSVG 181

Query: 584 LVFARTSVRFV---------NERDDVPWVECNTVYIQPRKSVRNNQNVEFRRNRKDGWME 736
           +    +S + V           R  +   E N V    R +VR+           DGW+E
Sbjct: 182 IEGGHSSTKIVCLADPNARRRHRSRIIVTEPNRVLRLQRPNVRS-----------DGWLE 230

Query: 737 IKTGEFINDGGDDGEVEMRFMEIERLHAKSGLLVEGIEFRPKE 865
           I+ GEF   G +D EV+M  ++I+  H K G  VEGIE RPKE
Sbjct: 231 IEMGEFFISGLEDEEVQMSVIDIKGGHWKRGFFVEGIEVRPKE 273


>gb|ABK94787.1| unknown [Populus trichocarpa]
          Length = 267

 Score =  222 bits (565), Expect = 1e-55
 Identities = 126/269 (46%), Positives = 167/269 (62%), Gaps = 11/269 (4%)
 Frame = +2

Query: 92  LPEGCLSEILSLTSPWDAFRASSISRGFRTAADSDGVWDRFLPSNYLDII----ARSVSP 259
           LPE CL+ I+S TSP DA  ++ +SR FR+AADSD VW  FLPS++++II    A S S 
Sbjct: 7   LPEECLAHIISFTSPRDACGSALVSRNFRSAADSDAVWKGFLPSDHVEIISSSPASSSSQ 66

Query: 260 VNYVTEKQFYFLLCDSPILLDDGNLSFYLDKKSGKKCDMLGARQLSISWGDTSLYWRWAP 439
           +  +++K+ YF LC++PIL+++G +SF L+K  GKKC M+GAR LSI+WGDT  YW W P
Sbjct: 67  LTALSKKELYFHLCNNPILVNNGIMSFALEKHGGKKCYMIGARGLSITWGDTPDYWTWKP 126

Query: 440 -HMHSRFSEVAEL-LSFWLDIRGKINTQILSPKTIYETYLVYTL--ANRSYGLVFARTSV 607
               SRFSEVAEL   +WLD+RG+I+ +I SPKT Y  YLV+ L  + R +       SV
Sbjct: 127 LPDQSRFSEVAELRYVWWLDVRGRIDAKIFSPKTTYAAYLVFKLTDSTRGFDERLVELSV 186

Query: 608 RF---VNERDDVPWVECNTVYIQPRKSVRNNQNVEFRRNRKDGWMEIKTGEFINDGGDDG 778
            F   V E     +++    Y  P             R R DGWMEI+ GEF  D  DDG
Sbjct: 187 NFEESVGEEKLHVFLDVPPDYDMP----------PLPRERSDGWMEIEMGEFFYDNEDDG 236

Query: 779 EVEMRFMEIERLHAKSGLLVEGIEFRPKE 865
            V     E++    K+GL++EGIEFRPKE
Sbjct: 237 SVVAYLREVDNYTTKNGLIIEGIEFRPKE 265


>ref|XP_002279245.1| PREDICTED: F-box protein PP2-B15 [Vitis vinifera]
          Length = 285

 Score =  220 bits (561), Expect = 4e-55
 Identities = 128/284 (45%), Positives = 170/284 (59%), Gaps = 23/284 (8%)
 Frame = +2

Query: 83  FSDLPEGCLSEILSLTSPWDAFRASSISRGFRTAADSDGVWDRFLPSNYLDIIARSVSPV 262
           F+ LPEGC+S ILSLTSP DA ++S +S  FR AA+SD VW+RFLP++Y DI+ R V P+
Sbjct: 6   FNKLPEGCVSIILSLTSPPDACKSSLVSPMFRAAAESDVVWERFLPADYHDILCRLVEPL 65

Query: 263 NYVTEKQFYFLLCDSPILLDDGNLSFYLDKKSGKKCDMLGARQLSISWGDTSLYWRWAPH 442
              + K+ +  LCD PIL+D G+ SF LDK SGKK  +L AR+LSI+W +  +YW W   
Sbjct: 66  VCSSRKELFLRLCD-PILIDGGSKSFRLDKWSGKKSYLLSARELSITWSNDPMYWSWRST 124

Query: 443 MHSRFSEVAELLSF-WLDIRGKINTQILSPKTIYETYLVYTLANRSYG--LVFARTSVRF 613
             SRFS VAEL +  WL+I GKI TQ+LSP T Y  YL+  ++NR+YG  L+ +  SV  
Sbjct: 125 PESRFSHVAELRTMCWLEIHGKIRTQMLSPNTKYGAYLIMKISNRAYGLDLMPSEISVEV 184

Query: 614 VNERDDVPWVECN-TVYIQPRKSVRNNQNVEFRRNRK-------------------DGWM 733
            N         CN T Y++   S        F  NR+                   DGWM
Sbjct: 185 SNSTQ-----VCNGTAYLRCSDSKNKQMERLFYGNRREMLRSRVIEGDGRVPCEREDGWM 239

Query: 734 EIKTGEFINDGGDDGEVEMRFMEIERLHAKSGLLVEGIEFRPKE 865
           E++ G+F N  GD+ EV M   E++  H K GL++EGIE RPK+
Sbjct: 240 ELELGDFFNGEGDE-EVRMSLREVKGYHLKGGLIIEGIEVRPKD 282


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