BLASTX nr result

ID: Panax21_contig00020958 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020958
         (729 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAF98785.1| unnamed protein product [Tetraodon nigroviridis]       62   9e-08
ref|XP_004085099.1| PREDICTED: histone H3.2-like [Oryzias latipes]     61   2e-07
ref|XP_454338.1| hypothetical protein [Kluyveromyces lactis NRRL...    59   8e-07
gb|ELR20748.1| histone h3, putative [Acanthamoeba castellanii st...    58   2e-06
gb|ELR19918.1| histone h3, putative [Acanthamoeba castellanii st...    58   2e-06

>emb|CAF98785.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 188

 Score = 62.4 bits (150), Expect = 9e-08
 Identities = 35/61 (57%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
 Frame = -3

Query: 337 FCSLKTHPLSTMARTKQTTRKSTGGKAP-KEAASNQSPKISLGHWRSEKPHRFRPRIVAL 161
           F S  T PLS MARTKQT RKSTGGKAP K+ A+  + K +      +KPHR+RP  VAL
Sbjct: 30  FRSSDTRPLSAMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVAL 89

Query: 160 R 158
           R
Sbjct: 90  R 90


>ref|XP_004085099.1| PREDICTED: histone H3.2-like [Oryzias latipes]
          Length = 162

 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 38/77 (49%), Positives = 48/77 (62%), Gaps = 5/77 (6%)
 Frame = -3

Query: 373 THSLLLPRHNK----FFCSLKTHPLSTMARTKQTTRKSTGGKAP-KEAASNQSPKISLGH 209
           +HS+ LP  N+     FC  K   +S MARTKQT RKSTGGKAP K+ A+  + K +   
Sbjct: 2   SHSVALPSLNRCKRGLFC--KDRRVSKMARTKQTARKSTGGKAPRKQLATKAARKSAPAT 59

Query: 208 WRSEKPHRFRPRIVALR 158
              +KPHR+RP  VALR
Sbjct: 60  GGVKKPHRYRPGTVALR 76


>ref|XP_454338.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
           gi|49643473|emb|CAG99425.1| KLLA0E08625p [Kluyveromyces
           lactis]
          Length = 176

 Score = 59.3 bits (142), Expect = 8e-07
 Identities = 32/60 (53%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
 Frame = -3

Query: 334 CSLKTHPLSTMARTKQTTRKSTGGKAP-KEAASNQSPKISLGHWRSEKPHRFRPRIVALR 158
           C+   H  +TMARTKQT RKSTGGKAP K+ AS  + K +      +KPHR++P  VALR
Sbjct: 31  CTHNQHKPNTMARTKQTARKSTGGKAPRKQLASKAARKSAPSTGGVKKPHRYKPGTVALR 90


>gb|ELR20748.1| histone h3, putative [Acanthamoeba castellanii str. Neff]
          Length = 121

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 31/49 (63%), Positives = 36/49 (73%)
 Frame = -3

Query: 304 MARTKQTTRKSTGGKAPKEAASNQSPKISLGHWRSEKPHRFRPRIVALR 158
           MARTKQT RKSTGGKAP++ AS  + K +L     +KPHRFRP  VALR
Sbjct: 1   MARTKQTARKSTGGKAPRKMASKSAKKSALA-GGVKKPHRFRPGTVALR 48


>gb|ELR19918.1| histone h3, putative [Acanthamoeba castellanii str. Neff]
          Length = 134

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 31/49 (63%), Positives = 36/49 (73%)
 Frame = -3

Query: 304 MARTKQTTRKSTGGKAPKEAASNQSPKISLGHWRSEKPHRFRPRIVALR 158
           MARTKQT RKSTGGKAP++ AS  + K +L     +KPHRFRP  VALR
Sbjct: 1   MARTKQTARKSTGGKAPRKMASKSAKKSALA-GGVKKPHRFRPGTVALR 48


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