BLASTX nr result

ID: Panax21_contig00020954 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020954
         (554 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004139881.1| PREDICTED: late embryogenesis abundant prote...    50   1e-06
ref|XP_002517129.1| Late embryogenesis abundant protein D-34, pu...    57   3e-06
sp|P09444.1|LEA34_GOSHI RecName: Full=Late embryogenesis abundan...    55   6e-06
ref|XP_004134446.1| PREDICTED: late embryogenesis abundant prote...    45   1e-05

>ref|XP_004139881.1| PREDICTED: late embryogenesis abundant protein D-34-like [Cucumis
           sativus] gi|449492634|ref|XP_004159055.1| PREDICTED:
           late embryogenesis abundant protein D-34-like [Cucumis
           sativus]
          Length = 264

 Score = 50.4 bits (119), Expect(2) = 1e-06
 Identities = 34/83 (40%), Positives = 45/83 (54%), Gaps = 11/83 (13%)
 Frame = -3

Query: 465 AEVRATGSNVLTPIGLAATAQSAATHNVGMTRSGCRQG*TWHRSDE*KKNEAASS----- 301
           AEVRATGSNV+ P GLAA+AQSAA+ N G+++            D+ K N+         
Sbjct: 158 AEVRATGSNVVIPGGLAASAQSAASFNAGVSKD----------EDKIKLNDTLMDAAMRL 207

Query: 300 ------DKAGCGGVISADLRNSP 250
                  K    GV+SA+LRN+P
Sbjct: 208 PADKVVTKQDAEGVMSAELRNNP 230



 Score = 26.9 bits (58), Expect(2) = 1e-06
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = -2

Query: 250 PSLTTHPGGVADSV 209
           P L  HPGGVADS+
Sbjct: 230 PRLAAHPGGVADSI 243


>ref|XP_002517129.1| Late embryogenesis abundant protein D-34, putative [Ricinus
           communis] gi|223543764|gb|EEF45292.1| Late embryogenesis
           abundant protein D-34, putative [Ricinus communis]
          Length = 264

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 44/109 (40%), Positives = 56/109 (51%), Gaps = 11/109 (10%)
 Frame = -3

Query: 465 AEVRATGSNVLTPIGLAATAQSAATHNVGMTRSGCRQG*TWHRSDE*KKNEAASS----- 301
           AEVRATGSNV+ P GLAATAQSAA HN    R            D+ K  E  ++     
Sbjct: 167 AEVRATGSNVIIPGGLAATAQSAACHNAAARR----------EEDKIKLTEVLTAATTKL 216

Query: 300 ------DKAGCGGVISADLRNSPLA*QPIPGEWLILLLAAGARHNERTS 172
                  +A   GV+SA++RN+P      PG  +   +AA AR NE T+
Sbjct: 217 PADKVVTRADAEGVVSAEIRNNPNL-STHPG-GVAASMAAAARLNENTN 263


>sp|P09444.1|LEA34_GOSHI RecName: Full=Late embryogenesis abundant protein D-34; Short=LEA
           D-34 gi|18501|emb|CAA31594.1| D-34 Lea protein
           [Gossypium hirsutum] gi|167385|gb|AAA33075.1| storage
           protein [Gossypium hirsutum] gi|226556|prf||1601521F Lea
           D-34 gene
          Length = 264

 Score = 55.5 bits (132), Expect = 6e-06
 Identities = 45/109 (41%), Positives = 58/109 (53%), Gaps = 11/109 (10%)
 Frame = -3

Query: 465 AEVRATGSNVLTPIGLAATAQSAATHNVGMTRSGCRQG*TWHRSDE*KKNEAAS------ 304
           AEVRATGSNV+ P GLAATAQSAA HN  + R            ++ K N+  +      
Sbjct: 167 AEVRATGSNVIIPGGLAATAQSAAAHNATLDRD----------EEKIKLNQVLTGATAKL 216

Query: 303 -SDKA----GCGGVISADLRNSPLA*QPIPGEWLILLLAAGARHNERTS 172
            +DKA       GV+SA+LRN+P      PG  +   +AA AR NE  +
Sbjct: 217 PADKAVTRQDAEGVVSAELRNNPNV-ATHPG-GVAASMAAAARLNENVN 263


>ref|XP_004134446.1| PREDICTED: late embryogenesis abundant protein D-34-like [Cucumis
           sativus]
          Length = 506

 Score = 45.1 bits (105), Expect(2) = 1e-05
 Identities = 31/76 (40%), Positives = 43/76 (56%), Gaps = 4/76 (5%)
 Frame = -3

Query: 465 AEVRATGSNVLTPIGLAATAQSAATHNVGMTRSGCRQG*TWHRSDE*KKNEAASSDKA-- 292
           AEV ATG+N + P GL ATAQ+AA  N  M R   +    +  ++     E  ++DKA  
Sbjct: 169 AEVCATGNNAINPGGLGATAQAAAIFNARMDRDEDKIKLNYVLTE---ATEKLATDKAVS 225

Query: 291 --GCGGVISADLRNSP 250
                GV+SA+LRN+P
Sbjct: 226 RQDVEGVVSAELRNNP 241



 Score = 29.3 bits (64), Expect(2) = 1e-05
 Identities = 11/16 (68%), Positives = 14/16 (87%)
 Frame = -2

Query: 250 PSLTTHPGGVADSVAS 203
           PS+TTHPGGVA S+ +
Sbjct: 241 PSMTTHPGGVAASITA 256


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