BLASTX nr result

ID: Panax21_contig00020940 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020940
         (598 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270323.2| PREDICTED: putative DNA repair protein RAD23...   130   2e-28
emb|CBI25247.3| unnamed protein product [Vitis vinifera]              130   2e-28
ref|XP_002303970.1| predicted protein [Populus trichocarpa] gi|2...   127   1e-27
gb|AAF68123.1|AC010793_18 F20B17.8 [Arabidopsis thaliana]             124   1e-26
ref|NP_974181.1| putative DNA repair protein RAD23-1 [Arabidopsi...   124   1e-26

>ref|XP_002270323.2| PREDICTED: putative DNA repair protein RAD23-1-like [Vitis
           vinifera]
          Length = 400

 Score =  130 bits (327), Expect = 2e-28
 Identities = 62/67 (92%), Positives = 66/67 (98%)
 Frame = -2

Query: 597 SEGDLFDHPEQDMPHAISVTPAEQEAIERLEAMGFDRALVIEAFLACDRNEELAVNYLLE 418
           SEGD+FD PEQ++PHAI+VTPAEQEAIERLEAMGFDRALVIEAFLACDRNEELAVNYLLE
Sbjct: 334 SEGDIFDQPEQELPHAINVTPAEQEAIERLEAMGFDRALVIEAFLACDRNEELAVNYLLE 393

Query: 417 NAGDYED 397
           NAGDYED
Sbjct: 394 NAGDYED 400


>emb|CBI25247.3| unnamed protein product [Vitis vinifera]
          Length = 399

 Score =  130 bits (327), Expect = 2e-28
 Identities = 62/67 (92%), Positives = 66/67 (98%)
 Frame = -2

Query: 597 SEGDLFDHPEQDMPHAISVTPAEQEAIERLEAMGFDRALVIEAFLACDRNEELAVNYLLE 418
           SEGD+FD PEQ++PHAI+VTPAEQEAIERLEAMGFDRALVIEAFLACDRNEELAVNYLLE
Sbjct: 333 SEGDIFDQPEQELPHAINVTPAEQEAIERLEAMGFDRALVIEAFLACDRNEELAVNYLLE 392

Query: 417 NAGDYED 397
           NAGDYED
Sbjct: 393 NAGDYED 399


>ref|XP_002303970.1| predicted protein [Populus trichocarpa] gi|222841402|gb|EEE78949.1|
           predicted protein [Populus trichocarpa]
          Length = 358

 Score =  127 bits (320), Expect = 1e-27
 Identities = 60/67 (89%), Positives = 65/67 (97%)
 Frame = -2

Query: 597 SEGDLFDHPEQDMPHAISVTPAEQEAIERLEAMGFDRALVIEAFLACDRNEELAVNYLLE 418
           SEGD+FD P+QDMPHAI+VTPAEQEAIERLEAMGFDRALVIEAFLACDRNE+LA NYLLE
Sbjct: 292 SEGDIFDQPDQDMPHAINVTPAEQEAIERLEAMGFDRALVIEAFLACDRNEQLAANYLLE 351

Query: 417 NAGDYED 397
           NAGD+ED
Sbjct: 352 NAGDFED 358


>gb|AAF68123.1|AC010793_18 F20B17.8 [Arabidopsis thaliana]
          Length = 367

 Score =  124 bits (312), Expect = 1e-26
 Identities = 58/66 (87%), Positives = 64/66 (96%)
 Frame = -2

Query: 594 EGDLFDHPEQDMPHAISVTPAEQEAIERLEAMGFDRALVIEAFLACDRNEELAVNYLLEN 415
           EGD+FD PEQ+MPHAI+VTPAEQEAI+RLEAMGFDRALVIEAFLACDRNEELA NYLLEN
Sbjct: 302 EGDMFDQPEQEMPHAINVTPAEQEAIQRLEAMGFDRALVIEAFLACDRNEELAANYLLEN 361

Query: 414 AGDYED 397
           +GD+ED
Sbjct: 362 SGDFED 367


>ref|NP_974181.1| putative DNA repair protein RAD23-1 [Arabidopsis thaliana]
           gi|332198159|gb|AEE36280.1| putative DNA repair protein
           RAD23-1 [Arabidopsis thaliana]
          Length = 351

 Score =  124 bits (312), Expect = 1e-26
 Identities = 58/66 (87%), Positives = 64/66 (96%)
 Frame = -2

Query: 594 EGDLFDHPEQDMPHAISVTPAEQEAIERLEAMGFDRALVIEAFLACDRNEELAVNYLLEN 415
           EGD+FD PEQ+MPHAI+VTPAEQEAI+RLEAMGFDRALVIEAFLACDRNEELA NYLLEN
Sbjct: 286 EGDMFDQPEQEMPHAINVTPAEQEAIQRLEAMGFDRALVIEAFLACDRNEELAANYLLEN 345

Query: 414 AGDYED 397
           +GD+ED
Sbjct: 346 SGDFED 351


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