BLASTX nr result

ID: Panax21_contig00020930 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020930
         (603 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38228.3| unnamed protein product [Vitis vinifera]              265   4e-69
ref|XP_002269250.1| PREDICTED: KH domain-containing protein At4g...   265   4e-69
emb|CAN69138.1| hypothetical protein VITISV_022038 [Vitis vinifera]   265   4e-69
ref|XP_003541782.1| PREDICTED: poly(rC)-binding protein 3-like [...   213   3e-53
ref|XP_004137060.1| PREDICTED: KH domain-containing protein At4g...   211   8e-53

>emb|CBI38228.3| unnamed protein product [Vitis vinifera]
          Length = 585

 Score =  265 bits (678), Expect = 4e-69
 Identities = 139/215 (64%), Positives = 168/215 (78%), Gaps = 14/215 (6%)
 Frame = +1

Query: 1   IISEMRRVTGAFIRIIGGNQVPKCVSENDQLVQITGELVNVREALFNVTGRLRGNQFPSK 180
           IISEMR+ +GA IRIIG +QVPKC SENDQ+VQI+GE VNV++ L+++TGRLR N FPSK
Sbjct: 348 IISEMRKASGAGIRIIGSDQVPKCASENDQVVQISGEFVNVQDGLYHITGRLRDNLFPSK 407

Query: 181 MQNGAGIMN-------------RDP-SLGLCSSVGISNSVNRHTTLTQSMDNLGLSHNLD 318
             NGAGI +             RDP S GL SSVG+S S +RHTTLTQSMD+LGLSH+LD
Sbjct: 408 TLNGAGIRSSSAMNEISPYGRVRDPASFGLHSSVGVSPSFSRHTTLTQSMDHLGLSHSLD 467

Query: 319 GPPSPRLWTPQTGAGLNSRSILNVGKGLNYVKGGLELGSGNRSAVVTNTTVEIVVPENVI 498
            P SPRLW  QT  G+N R+I          KGG+ELGSG++SA++TNTTVEIV+PENVI
Sbjct: 468 HPTSPRLWPSQTVTGVNPRNI----------KGGIELGSGSKSAIITNTTVEIVIPENVI 517

Query: 499 GSVFGENGSNLARLRQISGAKVMVHEPRPGTTDRV 603
           GSV+GENG+NLARLR+ISGAKV +HEPRPGT+DR+
Sbjct: 518 GSVYGENGNNLARLRKISGAKVTLHEPRPGTSDRI 552


>ref|XP_002269250.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
            vinifera]
          Length = 648

 Score =  265 bits (678), Expect = 4e-69
 Identities = 139/215 (64%), Positives = 168/215 (78%), Gaps = 14/215 (6%)
 Frame = +1

Query: 1    IISEMRRVTGAFIRIIGGNQVPKCVSENDQLVQITGELVNVREALFNVTGRLRGNQFPSK 180
            IISEMR+ +GA IRIIG +QVPKC SENDQ+VQI+GE VNV++ L+++TGRLR N FPSK
Sbjct: 411  IISEMRKASGAGIRIIGSDQVPKCASENDQVVQISGEFVNVQDGLYHITGRLRDNLFPSK 470

Query: 181  MQNGAGIMN-------------RDP-SLGLCSSVGISNSVNRHTTLTQSMDNLGLSHNLD 318
              NGAGI +             RDP S GL SSVG+S S +RHTTLTQSMD+LGLSH+LD
Sbjct: 471  TLNGAGIRSSSAMNEISPYGRVRDPASFGLHSSVGVSPSFSRHTTLTQSMDHLGLSHSLD 530

Query: 319  GPPSPRLWTPQTGAGLNSRSILNVGKGLNYVKGGLELGSGNRSAVVTNTTVEIVVPENVI 498
             P SPRLW  QT  G+N R+I          KGG+ELGSG++SA++TNTTVEIV+PENVI
Sbjct: 531  HPTSPRLWPSQTVTGVNPRNI----------KGGIELGSGSKSAIITNTTVEIVIPENVI 580

Query: 499  GSVFGENGSNLARLRQISGAKVMVHEPRPGTTDRV 603
            GSV+GENG+NLARLR+ISGAKV +HEPRPGT+DR+
Sbjct: 581  GSVYGENGNNLARLRKISGAKVTLHEPRPGTSDRI 615


>emb|CAN69138.1| hypothetical protein VITISV_022038 [Vitis vinifera]
          Length = 569

 Score =  265 bits (678), Expect = 4e-69
 Identities = 139/215 (64%), Positives = 168/215 (78%), Gaps = 14/215 (6%)
 Frame = +1

Query: 1   IISEMRRVTGAFIRIIGGNQVPKCVSENDQLVQITGELVNVREALFNVTGRLRGNQFPSK 180
           IISEMR+ +GA IRIIG +QVPKC SENDQ+VQI+GE VNV++ L+++TGRLR N FPSK
Sbjct: 332 IISEMRKASGAGIRIIGSDQVPKCASENDQVVQISGEFVNVQDGLYHITGRLRDNLFPSK 391

Query: 181 MQNGAGIMN-------------RDP-SLGLCSSVGISNSVNRHTTLTQSMDNLGLSHNLD 318
             NGAGI +             RDP S GL SSVG+S S +RHTTLTQSMD+LGLSH+LD
Sbjct: 392 TLNGAGIRSSSAMNEISPYGRVRDPASFGLHSSVGVSPSFSRHTTLTQSMDHLGLSHSLD 451

Query: 319 GPPSPRLWTPQTGAGLNSRSILNVGKGLNYVKGGLELGSGNRSAVVTNTTVEIVVPENVI 498
            P SPRLW  QT  G+N R+I          KGG+ELGSG++SA++TNTTVEIV+PENVI
Sbjct: 452 HPTSPRLWPSQTVTGVNPRNI----------KGGIELGSGSKSAIITNTTVEIVIPENVI 501

Query: 499 GSVFGENGSNLARLRQISGAKVMVHEPRPGTTDRV 603
           GSV+GENG+NLARLR+ISGAKV +HEPRPGT+DR+
Sbjct: 502 GSVYGENGNNLARLRKISGAKVTLHEPRPGTSDRI 536


>ref|XP_003541782.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
          Length = 663

 Score =  213 bits (541), Expect = 3e-53
 Identities = 121/217 (55%), Positives = 150/217 (69%), Gaps = 16/217 (7%)
 Frame = +1

Query: 1    IISEMRRVTGAFIRIIGGNQVPKCVSENDQLVQITGELVNVREALFNVTGRLRGNQFPSK 180
            I+SE+R+ TGA IRIIG +QVPKC S+NDQ+VQI+GE  +V++AL+N TGRLR N F S 
Sbjct: 424  IVSEIRKATGANIRIIGTDQVPKCASDNDQVVQISGEFSSVQDALYNATGRLRDNLFVST 483

Query: 181  MQNGAGIMNRDPSLGLCSSVGI---------------SNSVNRHTTLTQSMDNLGLSHNL 315
             QN AG  +        S  GI               S+ ++RHT   Q +D+LGLS NL
Sbjct: 484  -QNSAGTRSLSSLRVDTSPYGIQQDFVPHGSQLPATTSHCLSRHT-FAQGIDHLGLSRNL 541

Query: 316  DGPPSPRLWTPQTG-AGLNSRSILNVGKGLNYVKGGLELGSGNRSAVVTNTTVEIVVPEN 492
            D P SP LWT     AG+NSRSI +   GL   KGGLEL SG++SA+VTNTTVEIVVP++
Sbjct: 542  DHPSSPGLWTRNLDLAGINSRSINDFSLGLTSRKGGLELVSGSKSAIVTNTTVEIVVPDD 601

Query: 493  VIGSVFGENGSNLARLRQISGAKVMVHEPRPGTTDRV 603
             I  V+GENG NL RLRQISGAKV++HEPRPGT+DR+
Sbjct: 602  TIDCVYGENGRNLVRLRQISGAKVVIHEPRPGTSDRI 638


>ref|XP_004137060.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
            sativus]
          Length = 658

 Score =  211 bits (537), Expect = 8e-53
 Identities = 112/217 (51%), Positives = 150/217 (69%), Gaps = 16/217 (7%)
 Frame = +1

Query: 1    IISEMRRVTGAFIRIIGGNQVPKCVSENDQLVQITGELVNVREALFNVTGRLRGNQFPSK 180
            IISE+R+VTG  IRII  +QVP C +E+D++VQI+GE  NV++AL+NVTGRLR N F S 
Sbjct: 416  IISEIRKVTGTNIRIISSDQVPNCAAESDEIVQISGEFSNVQDALYNVTGRLRDNLFSSV 475

Query: 181  MQNGA----------------GIMNRDPSLGLCSSVGISNSVNRHTTLTQSMDNLGLSHN 312
            + N                  G +     L   + VG S+      +  QS D+LGLSH+
Sbjct: 476  LSNSGTRNGGGTSVYPETSPYGRVRDTAPLVRSTPVGTSHGSFMQHSTAQSSDDLGLSHS 535

Query: 313  LDGPPSPRLWTPQTGAGLNSRSILNVGKGLNYVKGGLELGSGNRSAVVTNTTVEIVVPEN 492
            LD P SP LW PQ+ +G++SR+I + G+GL   + G++LGSGN++A+VTNTTVEIVVP++
Sbjct: 536  LDSPSSPGLWPPQSLSGISSRAISDAGRGLPSHRSGVQLGSGNKTAIVTNTTVEIVVPDD 595

Query: 493  VIGSVFGENGSNLARLRQISGAKVMVHEPRPGTTDRV 603
            VI  V+GENG+NL RLRQISGAKV+VHEP P T+DR+
Sbjct: 596  VISLVYGENGTNLTRLRQISGAKVIVHEPDPITSDRL 632


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