BLASTX nr result

ID: Panax21_contig00020928 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020928
         (748 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAW28999.1| 1-deoxy-D-xylulose-5-phosphate synthase [Antirrhi...   125   3e-41
gb|AAG10432.1| 1-deoxy-D-xylulose-5-phosphate synthase [Tagetes ...   125   1e-37
gb|ACQ66107.1| 1-deoxy-D-xylulose 5-phosphate synthase 2 [Salvia...   125   1e-37
emb|CAN71054.1| hypothetical protein VITISV_003721 [Vitis vinifera]   120   6e-37
ref|XP_002271782.2| PREDICTED: probable 1-deoxy-D-xylulose-5-pho...   122   7e-37

>gb|AAW28999.1| 1-deoxy-D-xylulose-5-phosphate synthase [Antirrhinum majus]
          Length = 733

 Score =  125 bits (315), Expect(2) = 3e-41
 Identities = 58/64 (90%), Positives = 64/64 (100%)
 Frame = -3

Query: 194 IVYSVSKTGGHLSSSLGVAELTVALHHVFSTPEDKVIWDVGHQAYPHKILTGRRSRMNTI 15
           +VYSVSKTGGHLSSSLGVAELTVALHHVFSTPEDK+IWDVGHQAYPHKILTGRRS+M+T+
Sbjct: 117 LVYSVSKTGGHLSSSLGVAELTVALHHVFSTPEDKIIWDVGHQAYPHKILTGRRSKMHTM 176

Query: 14  RQTF 3
           R+TF
Sbjct: 177 RKTF 180



 Score = 69.3 bits (168), Expect(2) = 3e-41
 Identities = 46/135 (34%), Positives = 66/135 (48%)
 Frame = -1

Query: 718 MASFGILKSNLLTSLQHSQSGFSYSCRLPAATTHLPTNKRKFTGVVAAAQEGNVSEEREI 539
           MAS G+   +   SL  S    S+   L ++TT LP+ ++KF+G+ A  QE + SE+ EI
Sbjct: 1   MASCGVNMRSSFFSLLKSHDSSSWW--LSSSTTTLPSKRQKFSGISAVQQERDTSEKSEI 58

Query: 538 XXXXXXXXXXXXXXXXXXXXXXXXXXXXEQPSAAAAGIVNGHAHQFTKSLNFSGQKPHTP 359
                                                 +NG   +  ++LNF+G+KP TP
Sbjct: 59  INVNKEN-------------------------------LNGKNGRVARTLNFTGEKPSTP 87

Query: 358 ILDTINFPMHMKNLS 314
           ILDTIN+P+HMKNLS
Sbjct: 88  ILDTINYPIHMKNLS 102


>gb|AAG10432.1| 1-deoxy-D-xylulose-5-phosphate synthase [Tagetes erecta]
          Length = 725

 Score =  125 bits (313), Expect(2) = 1e-37
 Identities = 58/64 (90%), Positives = 62/64 (96%)
 Frame = -3

Query: 194 IVYSVSKTGGHLSSSLGVAELTVALHHVFSTPEDKVIWDVGHQAYPHKILTGRRSRMNTI 15
           IVY+VSKTGGHLSSSLGV ELTV+LHHVF+TPEDK+IWDVGHQAYPHKILTGRRSRM TI
Sbjct: 109 IVYTVSKTGGHLSSSLGVVELTVSLHHVFNTPEDKIIWDVGHQAYPHKILTGRRSRMRTI 168

Query: 14  RQTF 3
           RQTF
Sbjct: 169 RQTF 172



 Score = 57.8 bits (138), Expect(2) = 1e-37
 Identities = 41/135 (30%), Positives = 60/135 (44%), Gaps = 1/135 (0%)
 Frame = -1

Query: 718 MASFGILKSNLLTSLQHSQSGFSYSCRL-PAATTHLPTNKRKFTGVVAAAQEGNVSEERE 542
           MA  G LK   +     +Q+G++ S  L P+A   +P+NKRKF G+VA ++E   +E  +
Sbjct: 1   MALCGALKGGFVPI---AQNGYTSSSLLNPSANAIMPSNKRKFLGIVAVSKEHATNEHED 57

Query: 541 IXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQPSAAAAGIVNGHAHQFTKSLNFSGQKPHT 362
           +                                              + +L +SG KP T
Sbjct: 58  LTTMDKTT---------------------------------------STTLKYSGDKPKT 78

Query: 361 PILDTINFPMHMKNL 317
           PILDTIN+P+HMKNL
Sbjct: 79  PILDTINYPIHMKNL 93


>gb|ACQ66107.1| 1-deoxy-D-xylulose 5-phosphate synthase 2 [Salvia miltiorrhiza]
          Length = 724

 Score =  125 bits (314), Expect(2) = 1e-37
 Identities = 58/64 (90%), Positives = 64/64 (100%)
 Frame = -3

Query: 194 IVYSVSKTGGHLSSSLGVAELTVALHHVFSTPEDKVIWDVGHQAYPHKILTGRRSRMNTI 15
           IVY+VSKTGGHLSSSLGV+ELTVALHHVF+TPEDK+IWDVGHQAYPH+ILTGRRSRM+TI
Sbjct: 108 IVYTVSKTGGHLSSSLGVSELTVALHHVFNTPEDKIIWDVGHQAYPHEILTGRRSRMHTI 167

Query: 14  RQTF 3
           RQTF
Sbjct: 168 RQTF 171



 Score = 57.4 bits (137), Expect(2) = 1e-37
 Identities = 47/134 (35%), Positives = 61/134 (45%)
 Frame = -1

Query: 715 ASFGILKSNLLTSLQHSQSGFSYSCRLPAATTHLPTNKRKFTGVVAAAQEGNVSEEREIX 536
           +S G++ S+ L  L HS++  S   R    T  LP  K KF+ VVAA Q+ N ++     
Sbjct: 3   SSCGVINSSFLPLL-HSENSSSLLSR---TTATLPPKKHKFS-VVAALQQDNTND----- 52

Query: 535 XXXXXXXXXXXXXXXXXXXXXXXXXXXEQPSAAAAGIVNGHAHQFTKSLNFSGQKPHTPI 356
                                           AA G       Q T++LNF+G KP TPI
Sbjct: 53  -------------------------------VAANG--ESLTRQKTRALNFTGDKPPTPI 79

Query: 355 LDTINFPMHMKNLS 314
           LDTIN+P HMKNLS
Sbjct: 80  LDTINYPNHMKNLS 93


>emb|CAN71054.1| hypothetical protein VITISV_003721 [Vitis vinifera]
          Length = 1638

 Score =  120 bits (300), Expect(2) = 6e-37
 Identities = 55/63 (87%), Positives = 62/63 (98%)
 Frame = -3

Query: 194 IVYSVSKTGGHLSSSLGVAELTVALHHVFSTPEDKVIWDVGHQAYPHKILTGRRSRMNTI 15
           IVY+VSKTGGHLSSSLGVAELT+ALHHVF+TP+D++IWDVGHQAY HKILTGRRSRM+TI
Sbjct: 119 IVYTVSKTGGHLSSSLGVAELTIALHHVFNTPDDRIIWDVGHQAYAHKILTGRRSRMHTI 178

Query: 14  RQT 6
           RQT
Sbjct: 179 RQT 181



 Score = 60.5 bits (145), Expect(2) = 6e-37
 Identities = 44/136 (32%), Positives = 61/136 (44%), Gaps = 1/136 (0%)
 Frame = -1

Query: 718 MASFGILKSNLLTSLQHSQSGFSYSCRLPAATTHLPTNKRKFTGV-VAAAQEGNVSEERE 542
           MAS G+L++    +L       S S       T  P +K K   V + AAQ+ N+SE++ 
Sbjct: 1   MASCGVLRTCFCPTLSSQDRTPSLSRLTATTATSRPNSKPKSNSVMITAAQDNNLSEDKN 60

Query: 541 IXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQPSAAAAGIVNGHAHQFTKSLNFSGQKPHT 362
                                        EQ +            +FT+SLNFSG+KP T
Sbjct: 61  TMVGS------------------------EQQARRNP--------RFTRSLNFSGEKPST 88

Query: 361 PILDTINFPMHMKNLS 314
           P+LDTIN+P+H KNLS
Sbjct: 89  PVLDTINYPIHTKNLS 104


>ref|XP_002271782.2| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic-like [Vitis vinifera]
          Length = 815

 Score =  122 bits (305), Expect(2) = 7e-37
 Identities = 57/63 (90%), Positives = 61/63 (96%)
 Frame = -3

Query: 194 IVYSVSKTGGHLSSSLGVAELTVALHHVFSTPEDKVIWDVGHQAYPHKILTGRRSRMNTI 15
           IVY+VSKTGGHLSSSLGVAELT+ALHHVF TPEDK+IWDVGHQAY HKILTGRRSRM+TI
Sbjct: 199 IVYTVSKTGGHLSSSLGVAELTIALHHVFDTPEDKIIWDVGHQAYAHKILTGRRSRMHTI 258

Query: 14  RQT 6
           RQT
Sbjct: 259 RQT 261



 Score = 58.5 bits (140), Expect(2) = 7e-37
 Identities = 24/31 (77%), Positives = 30/31 (96%)
 Frame = -1

Query: 406 QFTKSLNFSGQKPHTPILDTINFPMHMKNLS 314
           +FT+SLNFSG+KP TP+LDTIN+P+HMKNLS
Sbjct: 154 RFTRSLNFSGEKPSTPVLDTINYPIHMKNLS 184


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