BLASTX nr result

ID: Panax21_contig00020925 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020925
         (1215 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308620.1| predicted protein [Populus trichocarpa] gi|2...   427   e-117
ref|NP_196709.1| putative GTP-binding protein [Arabidopsis thali...   426   e-117
ref|XP_002873516.1| GTP binding protein [Arabidopsis lyrata subs...   425   e-116
gb|AAM64748.1| putative GTP-binding protein [Arabidopsis thaliana]    424   e-116
ref|XP_002324249.1| predicted protein [Populus trichocarpa] gi|2...   422   e-115

>ref|XP_002308620.1| predicted protein [Populus trichocarpa] gi|222854596|gb|EEE92143.1|
           predicted protein [Populus trichocarpa]
          Length = 311

 Score =  427 bits (1098), Expect = e-117
 Identities = 223/317 (70%), Positives = 250/317 (78%), Gaps = 8/317 (2%)
 Frame = +2

Query: 56  MLLTQYLPRLSIFVPKSSSLYPQLFISPKSKLQITSTLISTPKISHFSSTPTIPLQE--- 226
           M L+Q LP+ +   P   + +  L +  K KL   + L ST      ++T  IP+ E   
Sbjct: 1   MALSQ-LPKFTHCPPSLYNTHINLPLLTKLKLPTLTRLKST-----LTTTEPIPITEAHN 54

Query: 227 -LTPPEETHVEISLEKLFVPPDTEVS----SPSSTRILKGSNIVLSKYARDSQVVQAEFV 391
            LTP EET  + SL+KLF+PPDTEVS    S  S RILKGSNIVLSKYAR++QVVQAEF+
Sbjct: 55  FLTPQEETQTQFSLDKLFIPPDTEVSINENSGLSARILKGSNIVLSKYARNAQVVQAEFI 114

Query: 392 KSSVKTEDCPSDGAPEFALVGRSNVGKSSLLNSLVRRKKLALTSKKPGKTQCINHFRINE 571
           KSSV+TEDCPSDG PEFALVGRSNVGKSSLLNSLVRRKKLALTSKKPGKTQCINHF++N+
Sbjct: 115 KSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKKPGKTQCINHFKVND 174

Query: 572 SWYLVDLPGFGYASAPRELRTDWAKFTKDYFLNRSTLVSVFLLIDASIPVKKIDLEYASW 751
           SWYLVDLPG+GYASAP+ELRTDW KFTKDYFLNRSTLVSVFLLIDASIP KKIDLEYASW
Sbjct: 175 SWYLVDLPGYGYASAPQELRTDWNKFTKDYFLNRSTLVSVFLLIDASIPAKKIDLEYASW 234

Query: 752 LGQNQIPMTLVFTKCDKRXXXXXXXXXXXXXVQEFQELIREFFQATPPWIMTSSVTNQGR 931
           LGQNQ+PMT +FTKCDKR             V EFQELIR FF+  PPWIMTS VTNQGR
Sbjct: 235 LGQNQVPMTFIFTKCDKRKKKRNGGKRPEENVNEFQELIRGFFETAPPWIMTSGVTNQGR 294

Query: 932 DEILLHMSQLRNYWLKH 982
           DE+LLHM+QLRNYWLKH
Sbjct: 295 DEMLLHMAQLRNYWLKH 311


>ref|NP_196709.1| putative GTP-binding protein [Arabidopsis thaliana]
           gi|7573405|emb|CAB87708.1| putative GTP-binding protein
           [Arabidopsis thaliana] gi|16648724|gb|AAL25554.1|
           AT5g11480/F15N18_70 [Arabidopsis thaliana]
           gi|23505999|gb|AAN28859.1| At5g11480/F15N18_70
           [Arabidopsis thaliana] gi|332004301|gb|AED91684.1|
           putative GTP-binding protein [Arabidopsis thaliana]
          Length = 318

 Score =  426 bits (1094), Expect = e-117
 Identities = 217/318 (68%), Positives = 254/318 (79%), Gaps = 10/318 (3%)
 Frame = +2

Query: 59  LLTQYLPR--LSIFVPKSSSLYPQ--LFISPKSKLQITSTLISTPKISHFSSTPTIPLQ- 223
           ++  +LPR  LSI    S SL      F++PK  + ++ TL S    S+ ++   IPL  
Sbjct: 1   MILAHLPRFHLSILAKPSFSLSSSHFSFLNPKPSVTVSRTLFSFASKSNLATVEPIPLSV 60

Query: 224 -ELTPPEETHVEISLEKLFVPPDTEVSSPSS----TRILKGSNIVLSKYARDSQVVQAEF 388
            + T  ++  VEI+L+KLF+PP+T++S   S    TRILKGSNIVLSKYARD+QVVQA++
Sbjct: 61  SDSTDLDDAPVEIALDKLFIPPETDISGEDSASLTTRILKGSNIVLSKYARDAQVVQADY 120

Query: 389 VKSSVKTEDCPSDGAPEFALVGRSNVGKSSLLNSLVRRKKLALTSKKPGKTQCINHFRIN 568
           VKSSVKTEDCP+DG PEFALVGRSNVGKSSLLNSLVRRK+LALTSKKPGKTQCINHFRIN
Sbjct: 121 VKSSVKTEDCPADGLPEFALVGRSNVGKSSLLNSLVRRKRLALTSKKPGKTQCINHFRIN 180

Query: 569 ESWYLVDLPGFGYASAPRELRTDWAKFTKDYFLNRSTLVSVFLLIDASIPVKKIDLEYAS 748
           + WYLVDLPG+GYASAP EL+ DW KFTKDYFLNRSTLVSVFLL+DASIPVK IDLEYAS
Sbjct: 181 DKWYLVDLPGYGYASAPHELKQDWNKFTKDYFLNRSTLVSVFLLVDASIPVKPIDLEYAS 240

Query: 749 WLGQNQIPMTLVFTKCDKRXXXXXXXXXXXXXVQEFQELIREFFQATPPWIMTSSVTNQG 928
           WLGQNQ+PMTL+FTKCDKR             ++EFQ+LI+ FF+ TPPWIMTSSVTNQG
Sbjct: 241 WLGQNQVPMTLIFTKCDKRKKKKNGGKKPEANIKEFQDLIQGFFETTPPWIMTSSVTNQG 300

Query: 929 RDEILLHMSQLRNYWLKH 982
           RDEILLHM+QLRNYWLKH
Sbjct: 301 RDEILLHMAQLRNYWLKH 318


>ref|XP_002873516.1| GTP binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297319353|gb|EFH49775.1| GTP binding protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 318

 Score =  425 bits (1093), Expect = e-116
 Identities = 219/319 (68%), Positives = 256/319 (80%), Gaps = 10/319 (3%)
 Frame = +2

Query: 56  MLLTQYLPR--LSIFVPKSSSLYPQLF--ISPKSKLQITSTLISTPKISHFSSTPTIPLQ 223
           M+L Q LPR  LSI    S +L    F  ++PK  +++  TL S    S+ ++   IPL 
Sbjct: 1   MILAQ-LPRFHLSILAKPSFALSSSHFNFLNPKPSVEVARTLFSFTSKSNLATVEPIPLS 59

Query: 224 --ELTPPEETHVEISLEKLFVPPDTEVSSPSST----RILKGSNIVLSKYARDSQVVQAE 385
             + +  ++  VEISL+KLF+PP+T++S   ST    RILKGSNIVLSKYARD+QVVQA+
Sbjct: 60  VSDSSDLDDAPVEISLDKLFIPPETDISGEDSTSLTARILKGSNIVLSKYARDAQVVQAD 119

Query: 386 FVKSSVKTEDCPSDGAPEFALVGRSNVGKSSLLNSLVRRKKLALTSKKPGKTQCINHFRI 565
           +VKSSVKTEDCP+DG PEFALVGRSNVGKSSLLNSLVRRK+LALTSKKPGKTQCINHFRI
Sbjct: 120 YVKSSVKTEDCPADGLPEFALVGRSNVGKSSLLNSLVRRKRLALTSKKPGKTQCINHFRI 179

Query: 566 NESWYLVDLPGFGYASAPRELRTDWAKFTKDYFLNRSTLVSVFLLIDASIPVKKIDLEYA 745
           N+ WYLVDLPG+GYASAP EL+ DW KFTKDYFLNRSTLVSVFLL+DASIPVK+IDLEYA
Sbjct: 180 NDKWYLVDLPGYGYASAPHELKQDWNKFTKDYFLNRSTLVSVFLLVDASIPVKQIDLEYA 239

Query: 746 SWLGQNQIPMTLVFTKCDKRXXXXXXXXXXXXXVQEFQELIREFFQATPPWIMTSSVTNQ 925
           SWLGQNQ+PMTL+FTKCDKR             ++EFQ+LI+ FF+ TPPWIMTSSVTNQ
Sbjct: 240 SWLGQNQVPMTLIFTKCDKRKKKKNGGKKPEENIKEFQDLIQGFFETTPPWIMTSSVTNQ 299

Query: 926 GRDEILLHMSQLRNYWLKH 982
           GRDEILLHM+QLRNYWLKH
Sbjct: 300 GRDEILLHMAQLRNYWLKH 318


>gb|AAM64748.1| putative GTP-binding protein [Arabidopsis thaliana]
          Length = 318

 Score =  424 bits (1090), Expect = e-116
 Identities = 216/318 (67%), Positives = 253/318 (79%), Gaps = 10/318 (3%)
 Frame = +2

Query: 59  LLTQYLPR--LSIFVPKSSSLYPQ--LFISPKSKLQITSTLISTPKISHFSSTPTIPLQ- 223
           ++  +LPR  LSI    S SL      F++PK  + ++ TL S    S+ ++   IPL  
Sbjct: 1   MILAHLPRFHLSILAKPSFSLSSSHFSFLNPKPSVTVSRTLFSFASKSNLATVEPIPLSV 60

Query: 224 -ELTPPEETHVEISLEKLFVPPDTEVSSPSS----TRILKGSNIVLSKYARDSQVVQAEF 388
            + T  ++   EI+L+KLF+PP+T++S   S    TRILKGSNIVLSKYARD+QVVQA++
Sbjct: 61  SDSTDLDDAPAEIALDKLFIPPETDISGEDSASLTTRILKGSNIVLSKYARDAQVVQADY 120

Query: 389 VKSSVKTEDCPSDGAPEFALVGRSNVGKSSLLNSLVRRKKLALTSKKPGKTQCINHFRIN 568
           VKSSVKTEDCP+DG PEFALVGRSNVGKSSLLNSLVRRK+LALTSKKPGKTQCINHFRIN
Sbjct: 121 VKSSVKTEDCPADGLPEFALVGRSNVGKSSLLNSLVRRKRLALTSKKPGKTQCINHFRIN 180

Query: 569 ESWYLVDLPGFGYASAPRELRTDWAKFTKDYFLNRSTLVSVFLLIDASIPVKKIDLEYAS 748
           + WYLVDLPG+GYASAP EL+ DW KFTKDYFLNRSTLVSVFLL+DASIPVK IDLEYAS
Sbjct: 181 DKWYLVDLPGYGYASAPHELKQDWNKFTKDYFLNRSTLVSVFLLVDASIPVKPIDLEYAS 240

Query: 749 WLGQNQIPMTLVFTKCDKRXXXXXXXXXXXXXVQEFQELIREFFQATPPWIMTSSVTNQG 928
           WLGQNQ+PMTL+FTKCDKR             ++EFQ+LI+ FF+ TPPWIMTSSVTNQG
Sbjct: 241 WLGQNQVPMTLIFTKCDKRKKKKNGGKKPEANIKEFQDLIQGFFETTPPWIMTSSVTNQG 300

Query: 929 RDEILLHMSQLRNYWLKH 982
           RDEILLHM+QLRNYWLKH
Sbjct: 301 RDEILLHMAQLRNYWLKH 318


>ref|XP_002324249.1| predicted protein [Populus trichocarpa] gi|222865683|gb|EEF02814.1|
           predicted protein [Populus trichocarpa]
          Length = 316

 Score =  422 bits (1084), Expect = e-115
 Identities = 219/314 (69%), Positives = 251/314 (79%), Gaps = 11/314 (3%)
 Frame = +2

Query: 74  LPRL--SIFVPKSSSLYPQLFISPKSKLQITSTLISTPKISHFSSTPTIPLQE----LTP 235
           LP+L  SIF     S Y  + +   +KL++++  +S  K S  ++T  IP  E    L  
Sbjct: 6   LPKLHFSIFTHPLPSPYTHINLPLITKLKLST--LSRLK-STVTTTEPIPFTEAHNLLAL 62

Query: 236 PEETHVEISLEKLFVPPDTEVS-----SPSSTRILKGSNIVLSKYARDSQVVQAEFVKSS 400
            E+T  + SL+KLF+PPDTEVS     S  S R+LKGSNIVLSKYARD+Q+VQAEF+KSS
Sbjct: 63  QEQTQTQFSLDKLFIPPDTEVSVNENSSGLSARVLKGSNIVLSKYARDAQIVQAEFIKSS 122

Query: 401 VKTEDCPSDGAPEFALVGRSNVGKSSLLNSLVRRKKLALTSKKPGKTQCINHFRINESWY 580
           V+TEDCPSDG PEFALVGRSNVGKSSLLNS+VRRKKLALTSKKPGKTQCINHF++N+SWY
Sbjct: 123 VRTEDCPSDGLPEFALVGRSNVGKSSLLNSIVRRKKLALTSKKPGKTQCINHFKVNDSWY 182

Query: 581 LVDLPGFGYASAPRELRTDWAKFTKDYFLNRSTLVSVFLLIDASIPVKKIDLEYASWLGQ 760
           LVDLPG+GYASAP+ELRTDW KFTKDYFLNRSTLVSVFLLIDASIP KKIDLEYASWLGQ
Sbjct: 183 LVDLPGYGYASAPQELRTDWNKFTKDYFLNRSTLVSVFLLIDASIPAKKIDLEYASWLGQ 242

Query: 761 NQIPMTLVFTKCDKRXXXXXXXXXXXXXVQEFQELIREFFQATPPWIMTSSVTNQGRDEI 940
           NQ+PMTL+FTKCDKR             V EFQELIR+FF+  PPWIMTS VTNQGRDE+
Sbjct: 243 NQVPMTLIFTKCDKRKKKKNGGKRPEENVNEFQELIRDFFETAPPWIMTSGVTNQGRDEM 302

Query: 941 LLHMSQLRNYWLKH 982
           LLHM+QLRNYWLKH
Sbjct: 303 LLHMAQLRNYWLKH 316


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