BLASTX nr result

ID: Panax21_contig00020912 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020912
         (1488 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516205.1| red protein, putative [Ricinus communis] gi|...   400   e-109
ref|XP_002274576.1| PREDICTED: protein Red isoform 1 [Vitis vini...   397   e-108
ref|XP_002274600.1| PREDICTED: protein Red isoform 2 [Vitis vini...   392   e-106
ref|XP_002324721.1| predicted protein [Populus trichocarpa] gi|2...   389   e-105
ref|XP_003546528.1| PREDICTED: protein Red-like [Glycine max]         369   1e-99

>ref|XP_002516205.1| red protein, putative [Ricinus communis] gi|223544691|gb|EEF46207.1|
            red protein, putative [Ricinus communis]
          Length = 567

 Score =  400 bits (1027), Expect = e-109
 Identities = 214/331 (64%), Positives = 239/331 (72%), Gaps = 3/331 (0%)
 Frame = -3

Query: 1192 YRDRAKERREDQNPDYEPNELGSFHAVAPPGNVDLLSADAHKISIEKSKYLGGDVEHTHL 1013
            YRDRAKERREDQNPDYEP ELGSFHAVAPPG VD  SADAHKISIEKSKYLGGDVEHTHL
Sbjct: 28   YRDRAKERREDQNPDYEPTELGSFHAVAPPGAVDTRSADAHKISIEKSKYLGGDVEHTHL 87

Query: 1012 VKGLDYALLSKVRXXXXXXXXXXXXXXXXXXXXXXECPVSFRTANAKSVYQCIVKPQATC 833
            VKGLDYALL+KVR                      +  +SFRTA AKSVYQ IVKPQA  
Sbjct: 88   VKGLDYALLNKVRSEIDKKPDAGDDADGKSRKSKEDQQLSFRTATAKSVYQSIVKPQAIM 147

Query: 832  KSNEMFLPGRMAFIFNMDSGFSHDIPTTLQRSKADCPVPEEMITVSVDGSVLDQIAKIMS 653
            K+NEMFLPGRM+FIFNM+ G++HDIPTTL RSKADCPVPEEM+TV+VDGSVLD+IAKIMS
Sbjct: 148  KTNEMFLPGRMSFIFNMEGGYTHDIPTTLHRSKADCPVPEEMVTVNVDGSVLDRIAKIMS 207

Query: 652  YLRLGSSGXXXXXXXXXXXXXXKIP-IHSEYDDDEKVSKPD--VIKNQIDREIXXXXXXX 482
            YLRLGSSG              KI  I  E+++++K SKP+  +  N+ +REI       
Sbjct: 208  YLRLGSSGKVLKKKKKEKDAKGKISVIGHEHNEEDKHSKPNGGISNNKTEREILPPPPPP 267

Query: 481  XXXXXPDSREKQGPSVARAEEDDIFVGDGTDYVIPTKDMSQSPISEDMEESPRNKERTLY 302
                 PDS EKQGP VAR EE+DIFVGDG DY +P KDMSQSP+SEDMEESPRNKER  Y
Sbjct: 268  PKKSQPDSHEKQGPIVARGEENDIFVGDGVDYDVPGKDMSQSPVSEDMEESPRNKERVSY 327

Query: 301  FDGPAYGPVPPSEPAYGPVPPSEPSHDWQPM 209
            F          SEP YGPVPPS PS +WQ +
Sbjct: 328  F----------SEPVYGPVPPSGPSQEWQDL 348


>ref|XP_002274576.1| PREDICTED: protein Red isoform 1 [Vitis vinifera]
            gi|297738505|emb|CBI27750.3| unnamed protein product
            [Vitis vinifera]
          Length = 566

 Score =  397 bits (1019), Expect = e-108
 Identities = 216/341 (63%), Positives = 240/341 (70%), Gaps = 3/341 (0%)
 Frame = -3

Query: 1273 MSSNRKNHXXXXXXXXXXXXXXXXXXKYRDRAKERREDQNPDYEPNELGSFHAVAPPGNV 1094
            M+S+++NH                  KYRDRAKERREDQNPDYEP ELGSFHAVAPPG V
Sbjct: 1    MASSKRNHKEKIIRRKEEKPEEPELPKYRDRAKERREDQNPDYEPTELGSFHAVAPPGTV 60

Query: 1093 DLLSADAHKISIEKSKYLGGDVEHTHLVKGLDYALLSKVRXXXXXXXXXXXXXXXXXXXX 914
            DL S DA+KISIE SKYLGGDVEHTHLVKGLDYALL KVR                    
Sbjct: 61   DLRSTDANKISIEHSKYLGGDVEHTHLVKGLDYALLHKVRSEIEKKPEVGDDADGKSRVS 120

Query: 913  XXECPVSFRTANAKSVYQCIVKPQATCKSNEMFLPGRMAFIFNMDSGFSHDIPTTLQRSK 734
              + P+SFRTA AKSVYQ IVKPQ   KSNEMFLPGRMAFIF+M+ GFS DIPTTL RSK
Sbjct: 121  NEDQPLSFRTATAKSVYQWIVKPQTVVKSNEMFLPGRMAFIFSMEGGFSSDIPTTLHRSK 180

Query: 733  ADCPVPEEMITVSVDGSVLDQIAKIMSYLRLGSSGXXXXXXXXXXXXXXKI-PIHSEYDD 557
            ADCPVPEEM+TV VDGSVLD+IAKIMSYLRLGSSG              KI  + +E+D+
Sbjct: 181  ADCPVPEEMVTVGVDGSVLDRIAKIMSYLRLGSSGKVLKKKKKERDVKGKISTVGNEFDE 240

Query: 556  DEKVSKPD--VIKNQIDREIXXXXXXXXXXXXPDSREKQGPSVARAEEDDIFVGDGTDYV 383
            ++K SK D  + KNQ +RE              DSREK GPSVAR+E+DDIFVGDG +Y 
Sbjct: 241  EKKPSKLDGGMSKNQTERE-SLPPPLPPRKNYVDSREKHGPSVARSEQDDIFVGDGVEYD 299

Query: 382  IPTKDMSQSPISEDMEESPRNKERTLYFDGPAYGPVPPSEP 260
            IP+KDMSQSP+SEDMEESPRNKER  Y   PAYGPVPPSEP
Sbjct: 300  IPSKDMSQSPVSEDMEESPRNKERISYLSEPAYGPVPPSEP 340


>ref|XP_002274600.1| PREDICTED: protein Red isoform 2 [Vitis vinifera]
          Length = 567

 Score =  392 bits (1007), Expect = e-106
 Identities = 216/342 (63%), Positives = 240/342 (70%), Gaps = 4/342 (1%)
 Frame = -3

Query: 1273 MSSNRKNHXXXXXXXXXXXXXXXXXXKYRDRAKERREDQNPDYEPNELGSFHAVAPPGNV 1094
            M+S+++NH                  KYRDRAKERREDQNPDYEP ELGSFHAVAPPG V
Sbjct: 1    MASSKRNHKEKIIRRKEEKPEEPELPKYRDRAKERREDQNPDYEPTELGSFHAVAPPGTV 60

Query: 1093 DLLSADAHKISIEKSKYLGGDVEHTHLVKGLDYALLSKVRXXXXXXXXXXXXXXXXXXXX 914
            DL S DA+KISIE SKYLGGDVEHTHLVKGLDYALL KVR                    
Sbjct: 61   DLRSTDANKISIEHSKYLGGDVEHTHLVKGLDYALLHKVRSEIEKKPEVGDDADGNKTSN 120

Query: 913  XXEC-PVSFRTANAKSVYQCIVKPQATCKSNEMFLPGRMAFIFNMDSGFSHDIPTTLQRS 737
              +  P+SFRTA AKSVYQ IVKPQ   KSNEMFLPGRMAFIF+M+ GFS DIPTTL RS
Sbjct: 121  PRKDQPLSFRTATAKSVYQWIVKPQTVVKSNEMFLPGRMAFIFSMEGGFSSDIPTTLHRS 180

Query: 736  KADCPVPEEMITVSVDGSVLDQIAKIMSYLRLGSSGXXXXXXXXXXXXXXKI-PIHSEYD 560
            KADCPVPEEM+TV VDGSVLD+IAKIMSYLRLGSSG              KI  + +E+D
Sbjct: 181  KADCPVPEEMVTVGVDGSVLDRIAKIMSYLRLGSSGKVLKKKKKERDVKGKISTVGNEFD 240

Query: 559  DDEKVSKPD--VIKNQIDREIXXXXXXXXXXXXPDSREKQGPSVARAEEDDIFVGDGTDY 386
            +++K SK D  + KNQ +RE              DSREK GPSVAR+E+DDIFVGDG +Y
Sbjct: 241  EEKKPSKLDGGMSKNQTERE-SLPPPLPPRKNYVDSREKHGPSVARSEQDDIFVGDGVEY 299

Query: 385  VIPTKDMSQSPISEDMEESPRNKERTLYFDGPAYGPVPPSEP 260
             IP+KDMSQSP+SEDMEESPRNKER  Y   PAYGPVPPSEP
Sbjct: 300  DIPSKDMSQSPVSEDMEESPRNKERISYLSEPAYGPVPPSEP 341


>ref|XP_002324721.1| predicted protein [Populus trichocarpa] gi|222866155|gb|EEF03286.1|
            predicted protein [Populus trichocarpa]
          Length = 567

 Score =  389 bits (998), Expect = e-105
 Identities = 213/357 (59%), Positives = 245/357 (68%), Gaps = 4/357 (1%)
 Frame = -3

Query: 1273 MSSNRKNHXXXXXXXXXXXXXXXXXXKYRDRAKERREDQNPDYEPNELGSFHAVAPPGNV 1094
            M+S++K++                  KYRDRAKERREDQNPDYEP ELGSFHAVAPPG V
Sbjct: 1    MTSSKKHYKEKIARRKEEKPEESETPKYRDRAKERREDQNPDYEPTELGSFHAVAPPGTV 60

Query: 1093 DLLS-ADAHKISIEKSKYLGGDVEHTHLVKGLDYALLSKVRXXXXXXXXXXXXXXXXXXX 917
            D+ S AD+++ISIEKSKYLGGDVEHTHLVKGLDYALL+KVR                   
Sbjct: 61   DIRSVADSNQISIEKSKYLGGDVEHTHLVKGLDYALLNKVRSEIDKKPDSAEDVDGKSRA 120

Query: 916  XXXECPVSFRTANAKSVYQCIVKPQATCKSNEMFLPGRMAFIFNMDSGFSHDIPTTLQRS 737
               +  + FRTA AKSVYQ IVKPQ   K+NEMFLPGRM+FIFNM+ G+SHDIPTTL RS
Sbjct: 121  SKEDQKILFRTATAKSVYQWIVKPQTIIKTNEMFLPGRMSFIFNMEGGYSHDIPTTLHRS 180

Query: 736  KADCPVPEEMITVSVDGSVLDQIAKIMSYLRLGSSGXXXXXXXXXXXXXXKIP-IHSEYD 560
            KADCPVPEEM+TVSVDGSVLD+IAKIMSYLRLGSSG              KI  + +EYD
Sbjct: 181  KADCPVPEEMVTVSVDGSVLDRIAKIMSYLRLGSSGKVLKKKKKDKDAKGKISVVGNEYD 240

Query: 559  DDEKVSKPD--VIKNQIDREIXXXXXXXXXXXXPDSREKQGPSVARAEEDDIFVGDGTDY 386
            + +K SKP   ++ N+ +REI             DS EKQ P+VAR +E+DIFVG G DY
Sbjct: 241  EHDKPSKPSGGMLNNKTEREILPPPPPPPKNNLADSFEKQQPAVAREDENDIFVGHGIDY 300

Query: 385  VIPTKDMSQSPISEDMEESPRNKERTLYFDGPAYGPVPPSEPAYGPVPPSEPSHDWQ 215
             +P KDMSQSP+SEDMEESPRNKER  YF          SEP YGPVPPSE SH+WQ
Sbjct: 301  EVPGKDMSQSPLSEDMEESPRNKERLSYF----------SEPVYGPVPPSELSHEWQ 347


>ref|XP_003546528.1| PREDICTED: protein Red-like [Glycine max]
          Length = 565

 Score =  369 bits (946), Expect = 1e-99
 Identities = 202/337 (59%), Positives = 231/337 (68%), Gaps = 2/337 (0%)
 Frame = -3

Query: 1270 SSNRKNHXXXXXXXXXXXXXXXXXXKYRDRAKERREDQNPDYEPNELGSFHAVAPPGNVD 1091
            +SN+KNH                  KYRDRAKERREDQNPDYE  ELG FHAVAPPG VD
Sbjct: 3    ASNKKNHKEKPIRRKEEKPEEPEVPKYRDRAKERREDQNPDYEQTELG-FHAVAPPGTVD 61

Query: 1090 LLSADAHKISIEKSKYLGGDVEHTHLVKGLDYALLSKVRXXXXXXXXXXXXXXXXXXXXX 911
            + S+DAHK+SIEKSKYLGGDVEHTHLVKGLDYALL+KVR                     
Sbjct: 62   IRSSDAHKLSIEKSKYLGGDVEHTHLVKGLDYALLNKVRSEIDKKPETGDDVEGKSRSAK 121

Query: 910  XECPVSFRTANAKSVYQCIVKPQATCKSNEMFLPGRMAFIFNMDSGFSHDIPTTLQRSKA 731
             +  VS RTA AKSVYQ IVKPQ   K+NEMFLPGRM FI+NM+ G+ HDIPTTL RSKA
Sbjct: 122  EDQQVSIRTATAKSVYQWIVKPQTISKTNEMFLPGRMTFIYNMEGGYHHDIPTTLHRSKA 181

Query: 730  DCPVPEEMITVSVDGSVLDQIAKIMSYLRLGSSGXXXXXXXXXXXXXXKI-PIHSEYDDD 554
            DCPVPEEM+TV+VDGSVLD+IAKIMSYLRLGSSG              KI  + + +D +
Sbjct: 182  DCPVPEEMVTVNVDGSVLDRIAKIMSYLRLGSSGKILKKKKKEKDAKGKILAVGNGFDKE 241

Query: 553  EKVSKPD-VIKNQIDREIXXXXXXXXXXXXPDSREKQGPSVARAEEDDIFVGDGTDYVIP 377
            +K SK +   KNQ ++EI              SREKQGP+VARAE+DDIFVG+G  Y +P
Sbjct: 242  DKPSKVEGGAKNQTEKEI--IPPPPIKKNPLHSREKQGPAVARAEDDDIFVGEGVHYDVP 299

Query: 376  TKDMSQSPISEDMEESPRNKERTLYFDGPAYGPVPPS 266
             KD+SQSP+SEDMEESPRNKE+  Y   P YGPVPPS
Sbjct: 300  GKDLSQSPVSEDMEESPRNKEKPSYVTEPTYGPVPPS 336


Top