BLASTX nr result

ID: Panax21_contig00020896 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020896
         (654 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297845.1| f-box family protein [Populus trichocarpa] g...   371   e-101
ref|XP_002304679.1| f-box family protein [Populus trichocarpa] g...   369   e-100
gb|ACL51019.1| F-box family protein [Citrus trifoliata]               368   e-100
gb|AFB74452.1| F-box family protein [Prunus persica]                  365   4e-99
ref|XP_002514903.1| conserved hypothetical protein [Ricinus comm...   365   5e-99

>ref|XP_002297845.1| f-box family protein [Populus trichocarpa]
           gi|222845103|gb|EEE82650.1| f-box family protein
           [Populus trichocarpa]
          Length = 481

 Score =  371 bits (952), Expect = e-101
 Identities = 172/217 (79%), Positives = 191/217 (88%)
 Frame = +3

Query: 3   FKMLEPGKPPPTKKARKDRNRIEFTGTTNPIEVMEQQIWKEFPEDLFDAVIAKLPVATFF 182
           FKMLEP KPPP+KK RK+RNR +  GTT+  EVM+Q+IWKEFPEDLF+AVIA+LP+ TFF
Sbjct: 94  FKMLEPCKPPPSKKPRKERNRGKSLGTTSSTEVMQQEIWKEFPEDLFEAVIARLPITTFF 153

Query: 183 RFRLVCRKWDSLLTSQSFSQQCAQVPQAQPWFYTITHENVNTGAMYDPILKKWHHPTFPA 362
           RFR VCRKW+S L SQSFSQ CAQVPQ+ PWFYTI HENVN+GAMYDP LKKWHHPT   
Sbjct: 154 RFRSVCRKWNSFLDSQSFSQHCAQVPQSNPWFYTIAHENVNSGAMYDPSLKKWHHPTISY 213

Query: 363 LPTQITVLPVASAGGLVCFLDIGHRSFYVCNPLTKSFKELPPRSVKVWSRVAVGMTLNEK 542
           LPT+  VLPVASAGGLVCFLDIGHR+FYVCNPLT+SFKELPPRSVKVWSRVAVGMTLN  
Sbjct: 214 LPTKTIVLPVASAGGLVCFLDIGHRNFYVCNPLTQSFKELPPRSVKVWSRVAVGMTLNSN 273

Query: 543 SSSGGYKILWVGCDGEYEVYDSKRNSWTCPGSMPSSI 653
           ++SGGYKILWV CDGE+EVYDS +NSWT PGSMPS I
Sbjct: 274 AASGGYKILWVCCDGEHEVYDSLKNSWTRPGSMPSCI 310


>ref|XP_002304679.1| f-box family protein [Populus trichocarpa]
           gi|222842111|gb|EEE79658.1| f-box family protein
           [Populus trichocarpa]
          Length = 386

 Score =  369 bits (947), Expect = e-100
 Identities = 172/215 (80%), Positives = 192/215 (89%)
 Frame = +3

Query: 9   MLEPGKPPPTKKARKDRNRIEFTGTTNPIEVMEQQIWKEFPEDLFDAVIAKLPVATFFRF 188
           MLEPGKPP +KK RK+RNR +  GTT+  EVM+Q+IWKEFPEDLF+AVIA+LP+ATFFRF
Sbjct: 1   MLEPGKPPASKKPRKERNRGKSLGTTSSNEVMQQEIWKEFPEDLFEAVIARLPIATFFRF 60

Query: 189 RLVCRKWDSLLTSQSFSQQCAQVPQAQPWFYTITHENVNTGAMYDPILKKWHHPTFPALP 368
           R VC+KW+SLL SQSFSQ CAQVPQA PWFYTITHENVN+GA+YDP LKKWHHPT   LP
Sbjct: 61  RSVCQKWNSLLDSQSFSQHCAQVPQANPWFYTITHENVNSGAIYDPSLKKWHHPTISYLP 120

Query: 369 TQITVLPVASAGGLVCFLDIGHRSFYVCNPLTKSFKELPPRSVKVWSRVAVGMTLNEKSS 548
           T++ VLPVASAGGLVCFLDIGHR+FYVCNPLT+SFKELPPRSV VWSRVAVGMTLN  ++
Sbjct: 121 TKMIVLPVASAGGLVCFLDIGHRNFYVCNPLTQSFKELPPRSVNVWSRVAVGMTLNGSAA 180

Query: 549 SGGYKILWVGCDGEYEVYDSKRNSWTCPGSMPSSI 653
           SGGYKILWV CDGEYEVYDS +NSWT PGSMPS I
Sbjct: 181 SGGYKILWVCCDGEYEVYDSLKNSWTRPGSMPSFI 215


>gb|ACL51019.1| F-box family protein [Citrus trifoliata]
          Length = 468

 Score =  368 bits (944), Expect = e-100
 Identities = 168/216 (77%), Positives = 192/216 (88%)
 Frame = +3

Query: 6   KMLEPGKPPPTKKARKDRNRIEFTGTTNPIEVMEQQIWKEFPEDLFDAVIAKLPVATFFR 185
           KMLEP KPPP+K++RK+RNR +  G+T+  E MEQ+IWKEFPEDL++AVIA+LP+ATFFR
Sbjct: 82  KMLEPVKPPPSKRSRKERNRGKLAGSTSTAEAMEQEIWKEFPEDLYEAVIARLPIATFFR 141

Query: 186 FRLVCRKWDSLLTSQSFSQQCAQVPQAQPWFYTITHENVNTGAMYDPILKKWHHPTFPAL 365
           FR VC+KW+SLL S SFSQ CAQVPQ  PWFYTITHENVN+GAMYDP LKKWHHPT  +L
Sbjct: 142 FRSVCQKWNSLLESHSFSQHCAQVPQGNPWFYTITHENVNSGAMYDPSLKKWHHPTISSL 201

Query: 366 PTQITVLPVASAGGLVCFLDIGHRSFYVCNPLTKSFKELPPRSVKVWSRVAVGMTLNEKS 545
           PT++ +LPVASA GLVCFLDIGHR+FYVCNPLT+SFKELP RSVKVWSRVAVGMTLN  S
Sbjct: 202 PTKMIILPVASARGLVCFLDIGHRNFYVCNPLTQSFKELPARSVKVWSRVAVGMTLNGNS 261

Query: 546 SSGGYKILWVGCDGEYEVYDSKRNSWTCPGSMPSSI 653
           +S GYKILWVGCDGEYE+YDS RNSWT PGSMPS+I
Sbjct: 262 TSSGYKILWVGCDGEYEIYDSLRNSWTRPGSMPSNI 297


>gb|AFB74452.1| F-box family protein [Prunus persica]
          Length = 495

 Score =  365 bits (937), Expect = 4e-99
 Identities = 169/216 (78%), Positives = 191/216 (88%)
 Frame = +3

Query: 6   KMLEPGKPPPTKKARKDRNRIEFTGTTNPIEVMEQQIWKEFPEDLFDAVIAKLPVATFFR 185
           KMLEP KPPPTK++RK+R R + +GTTN  E MEQ IWK+FPEDL++AVIA+LP+ATFFR
Sbjct: 91  KMLEPCKPPPTKRSRKERTRGKSSGTTNTTEPMEQHIWKDFPEDLYEAVIARLPIATFFR 150

Query: 186 FRLVCRKWDSLLTSQSFSQQCAQVPQAQPWFYTITHENVNTGAMYDPILKKWHHPTFPAL 365
           FR VCRKW+SLL S+SFSQ CA+VPQA PWFYTITHENVN+GAMYDP LKKWHHPT  +L
Sbjct: 151 FRTVCRKWNSLLDSESFSQHCAEVPQATPWFYTITHENVNSGAMYDPSLKKWHHPTISSL 210

Query: 366 PTQITVLPVASAGGLVCFLDIGHRSFYVCNPLTKSFKELPPRSVKVWSRVAVGMTLNEKS 545
           PT++ VLPVASAGGLVCFLDIG+R+FYVCNPL +SFKELP RSVKVWSRVAVGMTLN  S
Sbjct: 211 PTKLIVLPVASAGGLVCFLDIGNRNFYVCNPLNQSFKELPARSVKVWSRVAVGMTLNGSS 270

Query: 546 SSGGYKILWVGCDGEYEVYDSKRNSWTCPGSMPSSI 653
           +S GYKILWVGCDGEYEVYDS RNSW  PG MPSS+
Sbjct: 271 TSEGYKILWVGCDGEYEVYDSVRNSWIRPGIMPSSV 306


>ref|XP_002514903.1| conserved hypothetical protein [Ricinus communis]
           gi|223545954|gb|EEF47457.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 470

 Score =  365 bits (936), Expect = 5e-99
 Identities = 165/216 (76%), Positives = 194/216 (89%)
 Frame = +3

Query: 6   KMLEPGKPPPTKKARKDRNRIEFTGTTNPIEVMEQQIWKEFPEDLFDAVIAKLPVATFFR 185
           KMLEP KPPP+KK++K+RNR +  GTTN  EVME++IWK+FPEDLF+AVIA+LP+ATFFR
Sbjct: 84  KMLEPSKPPPSKKSKKERNRGKLLGTTNTTEVMEEEIWKDFPEDLFEAVIARLPIATFFR 143

Query: 186 FRLVCRKWDSLLTSQSFSQQCAQVPQAQPWFYTITHENVNTGAMYDPILKKWHHPTFPAL 365
           FR VCRKW+SLL+S+SFSQ C +V QA PWFYTITHENVN+GA+YDP LKKWHHPT  +L
Sbjct: 144 FRTVCRKWNSLLSSESFSQHCTKVLQANPWFYTITHENVNSGAIYDPSLKKWHHPTISSL 203

Query: 366 PTQITVLPVASAGGLVCFLDIGHRSFYVCNPLTKSFKELPPRSVKVWSRVAVGMTLNEKS 545
           PT++ VLPVASAGGLVCF+DIGHR+FYVCNPLT+SFKELP RSVKVWSR+AVGMTLN  +
Sbjct: 204 PTKMIVLPVASAGGLVCFIDIGHRNFYVCNPLTQSFKELPARSVKVWSRIAVGMTLNGSA 263

Query: 546 SSGGYKILWVGCDGEYEVYDSKRNSWTCPGSMPSSI 653
           +SGGYKILWV CDGEYEVYDS +NSW  PGSMP++I
Sbjct: 264 TSGGYKILWVCCDGEYEVYDSLKNSWIRPGSMPANI 299


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