BLASTX nr result

ID: Panax21_contig00020895 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020895
         (734 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27666.3| unnamed protein product [Vitis vinifera]              295   9e-78
ref|XP_002271194.1| PREDICTED: F-box only protein 6-like [Vitis ...   295   9e-78
ref|XP_002514903.1| conserved hypothetical protein [Ricinus comm...   285   9e-75
ref|XP_002297845.1| f-box family protein [Populus trichocarpa] g...   285   9e-75
gb|AFB74452.1| F-box family protein [Prunus persica]                  280   2e-73

>emb|CBI27666.3| unnamed protein product [Vitis vinifera]
          Length = 445

 Score =  295 bits (754), Expect = 9e-78
 Identities = 149/226 (65%), Positives = 169/226 (74%), Gaps = 4/226 (1%)
 Frame = +3

Query: 69  MLRQLIGQFQELLQLYHDSPFILNFHPNTPLL----QPDHRWYFLNLDGSPPEDDCCSLT 236
           MLRQLIG+ QEL +LY  S +I +  P+T LL    Q  HRW F N D    EDD C   
Sbjct: 1   MLRQLIGEVQELCELYGSSNYIPH-QPHTQLLYHHHQHSHRWCFSNFDDDSAEDDYCDPI 59

Query: 237 TEDGKPERPRNFKMLEPGKPPPTKKARKDRNRIEFTGTTNPIEVMEQQIWKEFPEDLFDA 416
              GK       K +E  +PPPTKK+RK+RNR +  GTTN  EVMEQ+IWKEFPEDLF+A
Sbjct: 60  MRSGKSG---TLKTMETYEPPPTKKSRKERNRGKLPGTTNSAEVMEQEIWKEFPEDLFEA 116

Query: 417 VIAKLPVATFFRFRLVCRKWDSLLTSQSFSQQCAQVPQAQPWFYTITHENVNTGAMYDPI 596
           VIA+LP+ATFFRFRLVCRKW+SLL S SFSQ CAQVPQ  PWFYTITHENV+ GAMYDP 
Sbjct: 117 VIARLPIATFFRFRLVCRKWNSLLNSNSFSQHCAQVPQGHPWFYTITHENVDPGAMYDPS 176

Query: 597 LKKWHHPTFPALPTQITVLPVASAGGLVCFLDIGHRSFCVCNPLTK 734
           LKKWHHPT P+L  + TVLPVASAGGLVCFLDI HR+F VCNPLT+
Sbjct: 177 LKKWHHPTIPSLRAK-TVLPVASAGGLVCFLDINHRNFFVCNPLTQ 221


>ref|XP_002271194.1| PREDICTED: F-box only protein 6-like [Vitis vinifera]
          Length = 522

 Score =  295 bits (754), Expect = 9e-78
 Identities = 149/226 (65%), Positives = 169/226 (74%), Gaps = 4/226 (1%)
 Frame = +3

Query: 69  MLRQLIGQFQELLQLYHDSPFILNFHPNTPLL----QPDHRWYFLNLDGSPPEDDCCSLT 236
           MLRQLIG+ QEL +LY  S +I +  P+T LL    Q  HRW F N D    EDD C   
Sbjct: 68  MLRQLIGEVQELCELYGSSNYIPH-QPHTQLLYHHHQHSHRWCFSNFDDDSAEDDYCDPI 126

Query: 237 TEDGKPERPRNFKMLEPGKPPPTKKARKDRNRIEFTGTTNPIEVMEQQIWKEFPEDLFDA 416
              GK       K +E  +PPPTKK+RK+RNR +  GTTN  EVMEQ+IWKEFPEDLF+A
Sbjct: 127 MRSGKSG---TLKTMETYEPPPTKKSRKERNRGKLPGTTNSAEVMEQEIWKEFPEDLFEA 183

Query: 417 VIAKLPVATFFRFRLVCRKWDSLLTSQSFSQQCAQVPQAQPWFYTITHENVNTGAMYDPI 596
           VIA+LP+ATFFRFRLVCRKW+SLL S SFSQ CAQVPQ  PWFYTITHENV+ GAMYDP 
Sbjct: 184 VIARLPIATFFRFRLVCRKWNSLLNSNSFSQHCAQVPQGHPWFYTITHENVDPGAMYDPS 243

Query: 597 LKKWHHPTFPALPTQITVLPVASAGGLVCFLDIGHRSFCVCNPLTK 734
           LKKWHHPT P+L  + TVLPVASAGGLVCFLDI HR+F VCNPLT+
Sbjct: 244 LKKWHHPTIPSLRAK-TVLPVASAGGLVCFLDINHRNFFVCNPLTQ 288


>ref|XP_002514903.1| conserved hypothetical protein [Ricinus communis]
           gi|223545954|gb|EEF47457.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 470

 Score =  285 bits (728), Expect = 9e-75
 Identities = 146/236 (61%), Positives = 172/236 (72%), Gaps = 14/236 (5%)
 Frame = +3

Query: 69  MLRQLIGQFQELLQLYHDSP------FILNFHPNTPLLQPDH-------RWYFLNL-DGS 206
           MLRQLIGQ  +LL LY   P      F L   P   L    H       RW  L++ DGS
Sbjct: 7   MLRQLIGQLHDLLNLYGSPPPPLPPPFHLRHQPFLELRNHHHHHVDNRNRWCVLDINDGS 66

Query: 207 PPEDDCCSLTTEDGKPERPRNFKMLEPGKPPPTKKARKDRNRIEFTGTTNPIEVMEQQIW 386
              DD C L    GK  R    KMLEP KPPP+KK++K+RNR +  GTTN  EVME++IW
Sbjct: 67  A--DDYCDLVMAAGKSGR---CKMLEPSKPPPSKKSKKERNRGKLLGTTNTTEVMEEEIW 121

Query: 387 KEFPEDLFDAVIAKLPVATFFRFRLVCRKWDSLLTSQSFSQQCAQVPQAQPWFYTITHEN 566
           K+FPEDLF+AVIA+LP+ATFFRFR VCRKW+SLL+S+SFSQ C +V QA PWFYTITHEN
Sbjct: 122 KDFPEDLFEAVIARLPIATFFRFRTVCRKWNSLLSSESFSQHCTKVLQANPWFYTITHEN 181

Query: 567 VNTGAMYDPILKKWHHPTFPALPTQITVLPVASAGGLVCFLDIGHRSFCVCNPLTK 734
           VN+GA+YDP LKKWHHPT  +LPT++ VLPVASAGGLVCF+DIGHR+F VCNPLT+
Sbjct: 182 VNSGAIYDPSLKKWHHPTISSLPTKMIVLPVASAGGLVCFIDIGHRNFYVCNPLTQ 237


>ref|XP_002297845.1| f-box family protein [Populus trichocarpa]
           gi|222845103|gb|EEE82650.1| f-box family protein
           [Populus trichocarpa]
          Length = 481

 Score =  285 bits (728), Expect = 9e-75
 Identities = 151/246 (61%), Positives = 171/246 (69%), Gaps = 24/246 (9%)
 Frame = +3

Query: 69  MLRQLIGQFQELLQLY------HDSPFILNFHPNTP---------------LLQPD---H 176
           MLRQ IGQ Q+LL LY       DS    +FH +                 LL      +
Sbjct: 7   MLRQFIGQLQDLLNLYGSPLPPFDSLQPFHFHNHQQQNHNNGNNNRIFFFLLLAASTLIY 66

Query: 177 RWYFLNLDGSPPEDDCCSLTTEDGKPERPRNFKMLEPGKPPPTKKARKDRNRIEFTGTTN 356
           RW FLNLD     DD CSL    GK     +FKMLEP KPPP+KK RK+RNR +  GTT+
Sbjct: 67  RWCFLNLDDG-SADDYCSLVMAAGK---SGSFKMLEPCKPPPSKKPRKERNRGKSLGTTS 122

Query: 357 PIEVMEQQIWKEFPEDLFDAVIAKLPVATFFRFRLVCRKWDSLLTSQSFSQQCAQVPQAQ 536
             EVM+Q+IWKEFPEDLF+AVIA+LP+ TFFRFR VCRKW+S L SQSFSQ CAQVPQ+ 
Sbjct: 123 STEVMQQEIWKEFPEDLFEAVIARLPITTFFRFRSVCRKWNSFLDSQSFSQHCAQVPQSN 182

Query: 537 PWFYTITHENVNTGAMYDPILKKWHHPTFPALPTQITVLPVASAGGLVCFLDIGHRSFCV 716
           PWFYTI HENVN+GAMYDP LKKWHHPT   LPT+  VLPVASAGGLVCFLDIGHR+F V
Sbjct: 183 PWFYTIAHENVNSGAMYDPSLKKWHHPTISYLPTKTIVLPVASAGGLVCFLDIGHRNFYV 242

Query: 717 CNPLTK 734
           CNPLT+
Sbjct: 243 CNPLTQ 248


>gb|AFB74452.1| F-box family protein [Prunus persica]
          Length = 495

 Score =  280 bits (717), Expect = 2e-73
 Identities = 144/243 (59%), Positives = 171/243 (70%), Gaps = 21/243 (8%)
 Frame = +3

Query: 69  MLRQLIGQFQELLQLYHDSPF--------------------ILNFHPNTPLLQPDH-RWY 185
           MLRQLIGQ QEL+++Y   P                     +LN H      Q  H RW 
Sbjct: 6   MLRQLIGQLQELVEVYGSHPHYHLQQHHHLHLQPSLQFQLPLLNHHSQQQHQQHQHPRWC 65

Query: 186 FLNLDGSPPEDDCCSLTTEDGKPERPRNFKMLEPGKPPPTKKARKDRNRIEFTGTTNPIE 365
            +N+D   P DD  S     GK     + KMLEP KPPPTK++RK+R R + +GTTN  E
Sbjct: 66  PINVDEGSP-DDYYSFMMAAGKSG---SLKMLEPCKPPPTKRSRKERTRGKSSGTTNTTE 121

Query: 366 VMEQQIWKEFPEDLFDAVIAKLPVATFFRFRLVCRKWDSLLTSQSFSQQCAQVPQAQPWF 545
            MEQ IWK+FPEDL++AVIA+LP+ATFFRFR VCRKW+SLL S+SFSQ CA+VPQA PWF
Sbjct: 122 PMEQHIWKDFPEDLYEAVIARLPIATFFRFRTVCRKWNSLLDSESFSQHCAEVPQATPWF 181

Query: 546 YTITHENVNTGAMYDPILKKWHHPTFPALPTQITVLPVASAGGLVCFLDIGHRSFCVCNP 725
           YTITHENVN+GAMYDP LKKWHHPT  +LPT++ VLPVASAGGLVCFLDIG+R+F VCNP
Sbjct: 182 YTITHENVNSGAMYDPSLKKWHHPTISSLPTKLIVLPVASAGGLVCFLDIGNRNFYVCNP 241

Query: 726 LTK 734
           L +
Sbjct: 242 LNQ 244


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