BLASTX nr result

ID: Panax21_contig00020885 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020885
         (632 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAF18251.1| SEU3B protein [Antirrhinum majus]                      80   3e-13
emb|CAF18249.1| SEU3A protein [Antirrhinum majus]                      72   6e-11
gb|AAA86652.1| S25-PR6 [Nicotiana tabacum]                             64   2e-08
ref|XP_002265920.1| PREDICTED: transcriptional corepressor SEUSS...    64   2e-08
ref|XP_002300947.1| predicted protein [Populus trichocarpa] gi|2...    62   9e-08

>emb|CAF18251.1| SEU3B protein [Antirrhinum majus]
          Length = 297

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 46/111 (41%), Positives = 57/111 (51%), Gaps = 3/111 (2%)
 Frame = +1

Query: 1   VNGLLQPDNNSSLNGSNSIVANGTPNNNXXXXXXXXXXXXXXXXXXXXXNGIRAAMGSNN 180
           VNG+L  +NN+S+NGSN +V NG  N N                     NGIRAA+G+NN
Sbjct: 189 VNGMLSSNNNASMNGSNILVGNGMANGNMSGPGFGSIGGGLHQPAMV--NGIRAALGNNN 246

Query: 181 SVTMNGRVGMTMARDQNINH---XXXXXXXXXXXXXXXXXXXXQFDWKASP 324
           S++MNGRVGM MAR+Q +NH                       QFDWK SP
Sbjct: 247 SLSMNGRVGMAMAREQTMNHQQQQDMGNQLLSGLGAVNGFNNLQFDWKTSP 297


>emb|CAF18249.1| SEU3A protein [Antirrhinum majus]
          Length = 901

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 43/112 (38%), Positives = 55/112 (49%), Gaps = 4/112 (3%)
 Frame = +1

Query: 1    VNGLLQPDNNSSLNGSNSIVANGTPNNNXXXXXXXXXXXXXXXXXXXXXNGIRAAMGSNN 180
            VN +L  +NN+S+NGSN +V NG  N N                     NGI AA+G+NN
Sbjct: 792  VNVMLSSNNNASMNGSNILVGNGMANGNMSGPGFGGIGGGRGQPALV--NGIPAALGNNN 849

Query: 181  SVTMNGRVGMTMARDQNINHXXXXXXXXXXXXXXXXXXXXQF----DWKASP 324
            S++MNGRVGM MAR+Q +NH                    Q+    DWK SP
Sbjct: 850  SLSMNGRVGMAMAREQTMNHQQQQDMGNQLLSGLGAVNGFQYPSNLDWKTSP 901


>gb|AAA86652.1| S25-PR6 [Nicotiana tabacum]
          Length = 193

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 38/79 (48%), Positives = 47/79 (59%)
 Frame = +1

Query: 1   VNGLLQPDNNSSLNGSNSIVANGTPNNNXXXXXXXXXXXXXXXXXXXXXNGIRAAMGSNN 180
           VNGL+   NNS LNGS+ +V NGT N N                     NGIRAA+G N+
Sbjct: 104 VNGLITTANNSILNGSSCLVGNGTANAN-IGISPGYGNMGNGLSQAAMANGIRAALG-NS 161

Query: 181 SVTMNGRVGMTMARDQNIN 237
           SV MNGRVGM MAR+Q+++
Sbjct: 162 SVAMNGRVGMPMAREQSVS 180


>ref|XP_002265920.1| PREDICTED: transcriptional corepressor SEUSS-like [Vitis vinifera]
          Length = 913

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 45/110 (40%), Positives = 54/110 (49%), Gaps = 2/110 (1%)
 Frame = +1

Query: 1    VNGLLQPDNNSSLNGSNSIVANGTPNNNXXXXXXXXXXXXXXXXXXXXXNGIRAAMGSNN 180
            VNG+L   N++ LNG   +V NG P N+                     NG+RAAMG NN
Sbjct: 808  VNGILPTSNSTGLNGG--LVGNG-PGNSTPGIGGGGFGSMGGLGQSAMVNGMRAAMG-NN 863

Query: 181  SVTMNGRVGMT-MARDQNINH-XXXXXXXXXXXXXXXXXXXXQFDWKASP 324
            S+T+NGRVGMT M RDQ+INH                     QFDWK SP
Sbjct: 864  SLTINGRVGMTPMTRDQSINHQQDLGNQLLGGLGAVNGFNNLQFDWKQSP 913


>ref|XP_002300947.1| predicted protein [Populus trichocarpa] gi|222842673|gb|EEE80220.1|
            predicted protein [Populus trichocarpa]
          Length = 919

 Score = 62.0 bits (149), Expect = 9e-08
 Identities = 42/110 (38%), Positives = 53/110 (48%), Gaps = 2/110 (1%)
 Frame = +1

Query: 1    VNGLLQPDNNSSLNGSNSIVANGTPNNNXXXXXXXXXXXXXXXXXXXXXNGIRAAMGSNN 180
            VNG+L   NN+ LNG N +V NG  N++                     NGIRAAMG+N+
Sbjct: 814  VNGILPTGNNTVLNGGNGLVGNGAVNSS--GIGGAGYGTMGGLAQSVMVNGIRAAMGNNS 871

Query: 181  SVTMNGRVGM-TMARDQNINH-XXXXXXXXXXXXXXXXXXXXQFDWKASP 324
               MNGR+GM +M RDQ++NH                     QFDWK SP
Sbjct: 872  --MMNGRMGMPSMVRDQSMNHQQDLGNQLLSGLGAVNGFSNLQFDWKPSP 919


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