BLASTX nr result

ID: Panax21_contig00020884 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00020884
         (507 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331664.1| predicted protein [Populus trichocarpa] gi|2...   134   1e-29
ref|XP_003549500.1| PREDICTED: small nuclear ribonucleoprotein E...   133   1e-29
ref|XP_003542280.1| PREDICTED: small nuclear ribonucleoprotein E...   132   3e-29
ref|XP_003523208.1| PREDICTED: small nuclear ribonucleoprotein E...   132   4e-29
gb|ADR71258.1| small nuclear ribonucleoprotein E [Hevea brasilie...   130   9e-29

>ref|XP_002331664.1| predicted protein [Populus trichocarpa]
           gi|224143797|ref|XP_002325079.1| predicted protein
           [Populus trichocarpa] gi|118483404|gb|ABK93602.1|
           unknown [Populus trichocarpa]
           gi|222866513|gb|EEF03644.1| predicted protein [Populus
           trichocarpa] gi|222874083|gb|EEF11214.1| predicted
           protein [Populus trichocarpa]
          Length = 88

 Score =  134 bits (336), Expect = 1e-29
 Identities = 67/69 (97%), Positives = 68/69 (98%)
 Frame = -2

Query: 506 FLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLEDAEEVSIKKKSRKQLGRILLKGDN 327
           FLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLEDAEEV+IKKKSRK LGRILLKGDN
Sbjct: 20  FLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLEDAEEVNIKKKSRKSLGRILLKGDN 79

Query: 326 ITLMMNTGK 300
           ITLMMNTGK
Sbjct: 80  ITLMMNTGK 88


>ref|XP_003549500.1| PREDICTED: small nuclear ribonucleoprotein E [Glycine max]
           gi|255628153|gb|ACU14421.1| unknown [Glycine max]
          Length = 88

 Score =  133 bits (335), Expect = 1e-29
 Identities = 67/69 (97%), Positives = 68/69 (98%)
 Frame = -2

Query: 506 FLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLEDAEEVSIKKKSRKQLGRILLKGDN 327
           FLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVL+DAEEVSIKKKSRK LGRILLKGDN
Sbjct: 20  FLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVSIKKKSRKTLGRILLKGDN 79

Query: 326 ITLMMNTGK 300
           ITLMMNTGK
Sbjct: 80  ITLMMNTGK 88


>ref|XP_003542280.1| PREDICTED: small nuclear ribonucleoprotein E-like [Glycine max]
           gi|255627911|gb|ACU14300.1| unknown [Glycine max]
          Length = 88

 Score =  132 bits (332), Expect = 3e-29
 Identities = 66/69 (95%), Positives = 68/69 (98%)
 Frame = -2

Query: 506 FLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLEDAEEVSIKKKSRKQLGRILLKGDN 327
           FLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVL+DAEEV+IKKKSRK LGRILLKGDN
Sbjct: 20  FLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVNIKKKSRKTLGRILLKGDN 79

Query: 326 ITLMMNTGK 300
           ITLMMNTGK
Sbjct: 80  ITLMMNTGK 88


>ref|XP_003523208.1| PREDICTED: small nuclear ribonucleoprotein E-like [Glycine max]
           gi|356516401|ref|XP_003526883.1| PREDICTED: small
           nuclear ribonucleoprotein E [Glycine max]
           gi|388501720|gb|AFK38926.1| unknown [Lotus japonicus]
          Length = 88

 Score =  132 bits (331), Expect = 4e-29
 Identities = 65/69 (94%), Positives = 68/69 (98%)
 Frame = -2

Query: 506 FLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLEDAEEVSIKKKSRKQLGRILLKGDN 327
           FLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVL+DAEEV++KKKSRK LGRILLKGDN
Sbjct: 20  FLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVNVKKKSRKTLGRILLKGDN 79

Query: 326 ITLMMNTGK 300
           ITLMMNTGK
Sbjct: 80  ITLMMNTGK 88


>gb|ADR71258.1| small nuclear ribonucleoprotein E [Hevea brasiliensis]
          Length = 88

 Score =  130 bits (328), Expect = 9e-29
 Identities = 64/69 (92%), Positives = 68/69 (98%)
 Frame = -2

Query: 506 FLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLEDAEEVSIKKKSRKQLGRILLKGDN 327
           FLQSKARIQIWLFEQKD+RIEGRIIGFDEYMNLVL+DAEEV+IKKK+RK LGRILLKGDN
Sbjct: 20  FLQSKARIQIWLFEQKDMRIEGRIIGFDEYMNLVLDDAEEVNIKKKTRKSLGRILLKGDN 79

Query: 326 ITLMMNTGK 300
           ITLMMNTGK
Sbjct: 80  ITLMMNTGK 88


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